BP916084 |
Clone id |
YMU001_000082_H03 |
Library |
YMU01 |
Length |
491 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000082_H03. |
Accession |
BP916084 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1489Contig1 |
Sequence |
TAGCAAACTAGTGATGGAATCGTCATAAAACCGTTTATTGGCTGTTGAAATGATTTCATC ATCCCAAATATGATGGAGGTTGAATATACGACAATACCAGTGAACTTTGATGGTATTTCC ACCAAGATCTGAAGTGAAGCCTACATGAAGAGGCTGGTGAATGTCTCCAACAATGTGAGC CAAAAATAATAGCGCTTCAGTCAAGTTGTAGTGCTGTGAATCAGAAAAAAATGTAGTCAA CTGAGATGTATAGTTGTTGATGGCACCCGCAGCACATCTTCCTTTGATGCCTTGTGAATC ATGGCAATCACGATCATAGTTGTAGTTGCAAGAAAAATCTGGTGTATCGATAAAATGCAG TGCACTGCTCCACTTGTATCTGAAGCGCATTGCATCAGGCCATGAGCAAAGGCTGGCAAG GTTTCCCTCTGCGTCCTCTGGGAGTGAGGCTTGCACTGTCTGCTGGGTATCTTTTGAAAA AAGCTTCTGGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P24021 |
Definition |
sp|P24021|NUS1_ASPOR Nuclease S1 OS=Aspergillus oryzae |
Align length |
148 |
Score (bit) |
89.7 |
E-value |
6.0e-18 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9ZR88 |
Definition |
tr|Q9ZR88|Q9ZR88_ZINEL Bifunctional nuclease (Fragment) OS=Zinnia elegans |
Align length |
163 |
Score (bit) |
216.0 |
E-value |
3.0e-55 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916084|Adiantum capillus-veneris mRNA, clone: YMU001_000082_H03. (491 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9ZR88|Q9ZR88_ZINEL Bifunctional nuclease (Fragment) OS=Zinni... 216 3e-55 tr|A7P393|A7P393_VITVI Chromosome chr1 scaffold_5, whole genome ... 211 1e-53 tr|Q0JR05|Q0JR05_ORYSJ Os01g0128100 protein OS=Oryza sativa subs... 209 4e-53 tr|A2ZNU3|A2ZNU3_ORYSJ Putative uncharacterized protein OS=Oryza... 209 4e-53 tr|Q9ZR87|Q9ZR87_ZINEL Bifunctional nuclease OS=Zinnia elegans G... 207 2e-52 tr|B6T425|B6T425_MAIZE Nuclease PA3 OS=Zea mays PE=2 SV=1 207 3e-52 tr|A9TE01|A9TE01_PHYPA Predicted protein (Fragment) OS=Physcomit... 206 6e-52 tr|B8LP38|B8LP38_PICSI Putative uncharacterized protein OS=Picea... 205 1e-51 tr|Q52PK8|Q52PK8_DIACA Putative nuclease (Fragment) OS=Dianthus ... 199 4e-50 tr|Q9C9G4|Q9C9G4_ARATH Putative bifunctional nuclease; 47147-456... 196 4e-49 tr|Q8LCL6|Q8LCL6_ARATH Putative bifunctional nuclease OS=Arabido... 196 4e-49 tr|O80326|O80326_ZINEL Endonuclease OS=Zinnia elegans GN=ZEN1 PE... 196 4e-49 tr|A7R1U3|A7R1U3_VITVI Chromosome undetermined scaffold_377, who... 196 5e-49 tr|Q9LGA5|Q9LGA5_ORYSJ cDNA clone:001-030-F03, full insert seque... 194 2e-48 tr|Q0KFV0|Q0KFV0_SOLLC Putative endonuclease OS=Solanum lycopers... 194 2e-48 tr|A7R1U4|A7R1U4_VITVI Chromosome undetermined scaffold_377, who... 194 2e-48 tr|A5A338|A5A338_SOYBN Endonuclease OS=Glycine max GN=EN1 PE=2 SV=1 194 2e-48 tr|Q6B782|Q6B782_SOLTU Endonuclease OS=Solanum tuberosum PE=2 SV=1 193 3e-48 tr|Q3E9X8|Q3E9X8_ARATH Uncharacterized protein At4g21585.1 OS=Ar... 193 3e-48 tr|B4ERM5|B4ERM5_HUMLU Putative pre-endonuclease OS=Humulus lupu... 192 9e-48 tr|Q9LL59|Q9LL59_APIGR CEL I mismatch endonuclease OS=Apium grav... 191 1e-47 tr|B4FRP4|B4FRP4_MAIZE Putative uncharacterized protein OS=Zea m... 191 1e-47 tr|B2FH63|B2FH63_MAIZE Putative bifunctional nuclease OS=Zea may... 191 2e-47 tr|A0MSM3|A0MSM3_SPIOL SP I mismatch endonuclease OS=Spinacia ol... 191 2e-47 tr|Q9ZR89|Q9ZR89_ARATH Bifunctional nuclease bfn1 OS=Arabidopsis... 188 1e-46 tr|Q9SXA6|Q9SXA6_ARATH Bifunctional nuclease bfn1 OS=Arabidopsis... 188 1e-46 tr|O81656|O81656_HEMSP Senescence-associated protein 6 OS=Hemero... 188 1e-46 tr|B6U2F0|B6U2F0_MAIZE Nuclease PA3 OS=Zea mays PE=2 SV=1 188 1e-46 tr|B6THW1|B6THW1_MAIZE Putative uncharacterized protein OS=Zea m... 186 4e-46 tr|Q8LDW6|Q8LDW6_ARATH Putative bifunctional nuclease (At4g21590... 186 7e-46
>tr|Q9ZR88|Q9ZR88_ZINEL Bifunctional nuclease (Fragment) OS=Zinnia elegans GN=nucZe1 PE=4 SV=1 Length = 280
Score = 216 bits (551), Expect = 3e-55 Identities = 99/163 (60%), Positives = 118/163 (72%) Frame = -3
Query: 489 QKLFSKDTQQTVQASLPEDAEGNLASLCSWPDAMRFRYKWSSALHFIDTPDFSCNYNYDR 310 Q S+ V + LPE AEG+LASLCSW D ++FRY WSSALH+IDTPD C Y Y R Sbjct: 32 QGRLSQTAVDAVNSLLPEYAEGDLASLCSWADHVKFRYHWSSALHYIDTPDNLCTYQYRR 91
Query: 309 DCHDSQGIKGRCAAGAINNYTSQLTTFFSDSQHYNLTEALLFLAHIVGDIHQPLHVGFTS 130 DC D G+ GRC AGAI NYT+QL + + YNLTEALLFL+H +GDIHQPLHVGFTS Sbjct: 92 DCKDEDGVMGRCVAGAIMNYTTQLLDYGKQTSQYNLTEALLFLSHFMGDIHQPLHVGFTS 151
Query: 129 DLGGNTIKVHWYCRIFNLHHIWDDEIISTANKRFYDDSITSLL 1 D GGNTI VHW+ R LHH+WDD II TA +RFY ++ +L+ Sbjct: 152 DRGGNTIDVHWFTRKAVLHHVWDDSIIETAEERFYGSNVENLI 194
>tr|A7P393|A7P393_VITVI Chromosome chr1 scaffold_5, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00030352001 PE=4 SV=1 Length = 285
Score = 211 bits (537), Expect = 1e-53 Identities = 95/163 (58%), Positives = 116/163 (71%) Frame = -3
Query: 489 QKLFSKDTQQTVQASLPEDAEGNLASLCSWPDAMRFRYKWSSALHFIDTPDFSCNYNYDR 310 Q S V+ LP A+ +LASLCSW D ++FRY WSS LHF++TPD C Y Y R Sbjct: 37 QSRLSDVAADAVKELLPASADDDLASLCSWADRVKFRYHWSSPLHFLNTPDDLCTYQYTR 96
Query: 309 DCHDSQGIKGRCAAGAINNYTSQLTTFFSDSQHYNLTEALLFLAHIVGDIHQPLHVGFTS 130 DC D G+KGRC AGAINNYTSQL T+ S YNLTEALLFL+H++GD+HQPLHVGFT+ Sbjct: 97 DCKDEDGVKGRCVAGAINNYTSQLLTYGSSQADYNLTEALLFLSHLMGDVHQPLHVGFTT 156
Query: 129 DLGGNTIKVHWYCRIFNLHHIWDDEIISTANKRFYDDSITSLL 1 D GGNTI V WY R LHH+WD II TA ++FYD ++ ++ Sbjct: 157 DKGGNTIDVKWYNRKTVLHHVWDTNIIETAEEQFYDSNVDDMI 199
>tr|Q0JR05|Q0JR05_ORYSJ Os01g0128100 protein OS=Oryza sativa subsp. japonica GN=Os01g0128100 PE=4 SV=1 Length = 291
Score = 209 bits (533), Expect = 4e-53 Identities = 96/154 (62%), Positives = 111/154 (72%), Gaps = 2/154 (1%) Frame = -3
Query: 456 VQASLPEDAEGNLASLCSWPDAMRFRYKWSSALHFIDTPDFSCNYNYDRDCHDSQGIKGR 277 V+ LP A GNL+SLCSW D ++ RY WS+ LH+IDTPD C+Y YDRDC D +GR Sbjct: 52 VRGLLPSYAGGNLSSLCSWADGVKLRYPWSAPLHYIDTPDHLCSYTYDRDCKDEDSFRGR 111
Query: 276 CAAGAINNYTSQLTTF--FSDSQHYNLTEALLFLAHIVGDIHQPLHVGFTSDLGGNTIKV 103 C AGAINNYTSQL T+ S S YNLT+ALLFLAH VGDIHQPLHVGFTSD GGNTI V Sbjct: 112 CVAGAINNYTSQLLTYDATSPSTQYNLTQALLFLAHFVGDIHQPLHVGFTSDKGGNTIDV 171
Query: 102 HWYCRIFNLHHIWDDEIISTANKRFYDDSITSLL 1 HWY R LHH+WDD II TA +Y + + + Sbjct: 172 HWYTRKTVLHHVWDDNIIKTAENDYYGEGVAEFV 205
>tr|A2ZNU3|A2ZNU3_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_000215 PE=4 SV=1 Length = 285
Score = 209 bits (533), Expect = 4e-53 Identities = 96/154 (62%), Positives = 111/154 (72%), Gaps = 2/154 (1%) Frame = -3
Query: 456 VQASLPEDAEGNLASLCSWPDAMRFRYKWSSALHFIDTPDFSCNYNYDRDCHDSQGIKGR 277 V+ LP A GNL+SLCSW D ++ RY WS+ LH+IDTPD C+Y YDRDC D +GR Sbjct: 46 VRGLLPSYAGGNLSSLCSWADGVKLRYPWSAPLHYIDTPDHLCSYTYDRDCKDEDSFRGR 105
Query: 276 CAAGAINNYTSQLTTF--FSDSQHYNLTEALLFLAHIVGDIHQPLHVGFTSDLGGNTIKV 103 C AGAINNYTSQL T+ S S YNLT+ALLFLAH VGDIHQPLHVGFTSD GGNTI V Sbjct: 106 CVAGAINNYTSQLLTYDATSPSTQYNLTQALLFLAHFVGDIHQPLHVGFTSDKGGNTIDV 165
Query: 102 HWYCRIFNLHHIWDDEIISTANKRFYDDSITSLL 1 HWY R LHH+WDD II TA +Y + + + Sbjct: 166 HWYTRKTVLHHVWDDNIIKTAENDYYGEGVAEFV 199
>tr|Q9ZR87|Q9ZR87_ZINEL Bifunctional nuclease OS=Zinnia elegans GN=nucZe2 PE=4 SV=1 Length = 328
Score = 207 bits (527), Expect = 2e-52 Identities = 96/168 (57%), Positives = 121/168 (72%), Gaps = 5/168 (2%) Frame = -3
Query: 489 QKLFSKDTQQTVQASLPEDAEGNLASLCSWPDAMRFRYKW--SSALHFIDTPDFSCNYNY 316 Q S++ V+ LPE AEG+LAS+CSWPD +++ +KW +S LH++DTPDF CNY+Y Sbjct: 40 QSFLSEEALNAVKELLPETAEGDLASVCSWPDEIKWMHKWHWTSELHYVDTPDFRCNYDY 99
Query: 315 DRDCHDSQGIKGRCAAGAINNYTSQLTTFFSDSQH---YNLTEALLFLAHIVGDIHQPLH 145 RDCHDS G+K RC GAI NYT QL T ++ S YNLTEAL+FL+H +GD+HQPLH Sbjct: 100 CRDCHDSSGVKDRCVTGAIYNYTEQLITGYNASNSVVKYNLTEALMFLSHYIGDVHQPLH 159
Query: 144 VGFTSDLGGNTIKVHWYCRIFNLHHIWDDEIISTANKRFYDDSITSLL 1 V FTSD GGNTI V WY R NLHHIWD ++I +A K FYD I ++ Sbjct: 160 VSFTSDEGGNTIIVRWYKRKTNLHHIWDTDMIESAMKTFYDKDIDIMI 207
>tr|B6T425|B6T425_MAIZE Nuclease PA3 OS=Zea mays PE=2 SV=1 Length = 329
Score = 207 bits (526), Expect = 3e-52 Identities = 96/153 (62%), Positives = 110/153 (71%), Gaps = 1/153 (0%) Frame = -3
Query: 456 VQASLPEDAEGNLASLCSWPDAMRFRYKWSSALHFIDTPDFSCNYNYDRDCHDSQGIKGR 277 V+ LP A NL+SLCSW D ++FRY WSS LH+IDTPD C Y YDRDC D G++GR Sbjct: 90 VKDLLPSYAGNNLSSLCSWADDVKFRYPWSSPLHYIDTPDGLCTYRYDRDCKDEDGVEGR 149
Query: 276 CAAGAINNYTSQLTTF-FSDSQHYNLTEALLFLAHIVGDIHQPLHVGFTSDLGGNTIKVH 100 C AGAINNYTSQL + S YNLT+ALLFL+H +GDIHQPLHVGFTSD GGNTI VH Sbjct: 150 CVAGAINNYTSQLLAYRRSSPTEYNLTQALLFLSHFIGDIHQPLHVGFTSDKGGNTIDVH 209
Query: 99 WYCRIFNLHHIWDDEIISTANKRFYDDSITSLL 1 WY R LHH+WD II TA FY DS+ + Sbjct: 210 WYTRKTVLHHVWDASIIQTAEDDFYGDSVAGYI 242
>tr|A9TE01|A9TE01_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_5363 PE=4 SV=1 Length = 286
Score = 206 bits (523), Expect = 6e-52 Identities = 98/172 (56%), Positives = 126/172 (73%), Gaps = 9/172 (5%) Frame = -3
Query: 489 QKLFSKDTQQTVQASLPEDAEGNLASLCSWPDAMRF--RYKWSSALHFIDTPDFSCNYNY 316 + L + T + V + LPE A G+LASLC+W D +++ +Y W++ LH+IDTPDF C Y+Y Sbjct: 27 EPLLTPTTWKAVNSLLPERANGSLASLCTWADDIKWMWKYHWTAPLHYIDTPDFLCRYDY 86
Query: 315 DRDCHDSQGIKGRCAAGAINNYTSQLTTFFSD-------SQHYNLTEALLFLAHIVGDIH 157 DRDCHD G KG CA+GAINN+TSQLT + ++ +NLTEALLFLAHIVGDIH Sbjct: 87 DRDCHDQHGQKGFCASGAINNFTSQLTNYELPKASRPLLTKTHNLTEALLFLAHIVGDIH 146
Query: 156 QPLHVGFTSDLGGNTIKVHWYCRIFNLHHIWDDEIISTANKRFYDDSITSLL 1 QPLHVGFTSD GGNTI VHWY R NLHHIWD E+I A +Y+ S+++++ Sbjct: 147 QPLHVGFTSDAGGNTITVHWYRRKTNLHHIWDTEMIVKAEDVYYNKSLSNMV 198
>tr|B8LP38|B8LP38_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 294
Score = 205 bits (521), Expect = 1e-51 Identities = 96/165 (58%), Positives = 120/165 (72%), Gaps = 2/165 (1%) Frame = -3
Query: 489 QKLFSKDTQQTVQASLPEDAEGNLASLCSWPDAMRFRYKWSSALHFIDTPDFSCNYNYDR 310 Q L S++ V+ LP+ AEG+LASLCSW D +RFRY+W+S LHFIDTPD C Y Y R Sbjct: 42 QPLLSEEASAAVKKLLPDYAEGDLASLCSWADQVRFRYRWASPLHFIDTPDNKCTYIYSR 101
Query: 309 DCHDSQGIKGRCAAGAINNYTSQLTTF--FSDSQHYNLTEALLFLAHIVGDIHQPLHVGF 136 DCH+ +G +G C GAI NYTSQL + + +YNLTEALLFL+H +GDIHQPLHVGF Sbjct: 102 DCHNPEGEEGMCVDGAIKNYTSQLGNYGCRATGANYNLTEALLFLSHFMGDIHQPLHVGF 161
Query: 135 TSDLGGNTIKVHWYCRIFNLHHIWDDEIISTANKRFYDDSITSLL 1 ++D GGNTIK+HWY R NLHHIWD II TA K Y++ + ++ Sbjct: 162 STDEGGNTIKLHWYGRQNNLHHIWDTLIIETAMKDNYNNDLEEMI 206
>tr|Q52PK8|Q52PK8_DIACA Putative nuclease (Fragment) OS=Dianthus caryophyllus PE=2 SV=1 Length = 263
Score = 199 bits (507), Expect = 4e-50 Identities = 91/166 (54%), Positives = 117/166 (70%), Gaps = 4/166 (2%) Frame = -3
Query: 489 QKLFSKDTQQTVQASLPEDAEGNLASLCSWPDAMR--FRYKWSSALHFIDTPDFSCNYNY 316 Q L + V+ +PE GNL++LC WPD +R ++Y+W+S LHFID PD SC++NY Sbjct: 26 QNLLEPEALHAVKNLIPEHLNGNLSALCVWPDQVRHWYKYRWTSPLHFIDAPDDSCSFNY 85
Query: 315 DRDCHDSQGIKGRCAAGAINNYTSQLTTFF--SDSQHYNLTEALLFLAHIVGDIHQPLHV 142 DRDCHDS G+K C AGAI NYTSQL + S + YN+TEALLFL+H +GDIHQP+H Sbjct: 86 DRDCHDSHGVKDMCVAGAIQNYTSQLQHYREGSSDRRYNMTEALLFLSHFMGDIHQPMHC 145
Query: 141 GFTSDLGGNTIKVHWYCRIFNLHHIWDDEIISTANKRFYDDSITSL 4 G T+D GGNTI++ W+ NLHH+WD EII TA K +YD +T L Sbjct: 146 GHTTDEGGNTIELRWFKHKSNLHHVWDREIILTAMKDYYDKDVTLL 191
>tr|Q9C9G4|Q9C9G4_ARATH Putative bifunctional nuclease; 47147-45601 OS=Arabidopsis thaliana GN=At1g68290 PE=4 SV=1 Length = 290
Score = 196 bits (499), Expect = 4e-49 Identities = 91/166 (54%), Positives = 116/166 (69%), Gaps = 3/166 (1%) Frame = -3
Query: 489 QKLFSKDTQQTVQASLPEDAEGNLASLCSWPDAMRFRYKWSSALHFIDTPDFSCNYNYDR 310 Q + + V+ LPE AEG+L+SLC W D ++FRY WSS LH+I+TPD +C+Y Y+R Sbjct: 41 QTRLDETAAKAVKELLPESAEGDLSSLCLWADRVKFRYHWSSPLHYINTPD-ACSYQYNR 99
Query: 309 DCHDSQGIKGRCAAGAINNYTSQLTTF---FSDSQHYNLTEALLFLAHIVGDIHQPLHVG 139 DC D G KGRC AGAI NYT+QL ++ S YNLTEALLF++H +GDIHQPLHV Sbjct: 100 DCKDESGEKGRCVAGAIYNYTTQLLSYKTAASSQSQYNLTEALLFVSHFMGDIHQPLHVS 159
Query: 138 FTSDLGGNTIKVHWYCRIFNLHHIWDDEIISTANKRFYDDSITSLL 1 + SD GGNTI+VHWY R NLHHIWD II TA Y+ ++ ++ Sbjct: 160 YASDKGGNTIEVHWYTRKANLHHIWDSNIIETAEADLYNSALEGMV 205
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