BP916085
Clone id YMU001_000082_H05
Library
Length 461
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000082_H05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTGTGAGAGGCACTACCCTATGTCCCTCTGTAAAGAAATTGGGAAACAAATGTCAAGTCT
CTCTCATGTGGACTACATGTACATAAGACAAGGCTTGTCAATGCCCCGTCCCCAAGAAAG
AAGAAGAAGGTTTCCCATCATTAGCTTGCCATGTGGCAGTAATCGATAAGCTTTATCCAA
CGATCAACAATTGCTCCCAAGAATAACCACCAAAAATGGAGAAAATTTGGCTACCCCGGG
CTCCCATTGCTGGAATCTTCATAGCAAGTGACCGCTACATCACACTACTGTTTAAATTAT
TGTTCTCCAATGCTATCGCTCTTCTAAGTTTAGTCCTATCACTAATTGATAGCAGAATAC
GAATAACAATGAACTGGAAGATACATGTGACAAAAGCAGACAGTCTTGTGCCAAAAAAAC
TCTTGCCAACAAGACTTGTCTAAACTCTGGATCTTCAACCA
■■Homology search results ■■ -
sp_hit_id Q9WYZ5
Definition sp|Q9WYZ5|MIAA_THEMA tRNA delta(2)-isopentenylpyrophosphate transferase OS=Thermotoga maritima
Align length 37
Score (bit) 28.9
E-value 1.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916085|Adiantum capillus-veneris mRNA, clone:
YMU001_000082_H05.
(461 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9WYZ5|MIAA_THEMA tRNA delta(2)-isopentenylpyrophosphate tran... 29 1.6
sp|Q8SVN8|NTE1_ENCCU Lysophospholipase NTE1 OS=Encephalitozoon c... 29 8.5

>sp|Q9WYZ5|MIAA_THEMA tRNA delta(2)-isopentenylpyrophosphate
transferase OS=Thermotoga maritima GN=miaA PE=3 SV=1
Length = 305

Score = 28.9 bits (63), Expect(2) = 1.6
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +2

Query: 20 MSLCKEIGKQMSSL-SHVDYMYIRQGLSMPRPQERRR 127
+ +C+EIG ++ S+ S Y Y+ G + P P++R+R
Sbjct: 19 IEVCEEIGAEIISMDSRQIYRYMDIGTAKPTPEQRKR 55



Score = 21.2 bits (43), Expect(2) = 1.6
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = +1

Query: 106 PSPRKKKKVSHH 141
P+P ++K+V HH
Sbjct: 48 PTPEQRKRVLHH 59


>sp|Q8SVN8|NTE1_ENCCU Lysophospholipase NTE1 OS=Encephalitozoon
cuniculi GN=NTE1 PE=3 SV=1
Length = 905

Score = 29.3 bits (64), Expect = 8.5
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +2

Query: 8 RHYPMSLCKEIGKQMSSLSHVDYMYIRQ-GLSMPRPQERRRRFPIISL-PCGSNR*ALSN 181
RHY S C+ + ++ S S R G+S+ ++ +R+P+ + P S R LS+
Sbjct: 21 RHYGSSRCRTVPFKIKSRSIEKTASTRLLGMSL---EDAMKRYPLFNFYPGQSIREILSS 77

Query: 182 DQQLLPRITTKNGENLATPG 241
+ R+T NGE +A PG
Sbjct: 78 WE----RVTYGNGETIAAPG 93


tr_hit_id B5Z659
Definition tr|B5Z659|B5Z659_BACCE TrsD OS=Bacillus cereus H3081.97
Align length 68
Score (bit) 34.7
E-value 2.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916085|Adiantum capillus-veneris mRNA, clone:
YMU001_000082_H05.
(461 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B5Z659|B5Z659_BACCE TrsD OS=Bacillus cereus H3081.97 GN=BCH30... 35 2.4
tr|Q03WG1|Q03WG1_LEUMM Permease of the major facilitator superfa... 34 3.2
tr|Q9MB65|Q9MB65_MALDO 1-aminocyclopropane-1-carboxylate synthas... 33 7.0
tr|Q97A39|Q97A39_THEVO Molybdenum cofactor biosynthesis protein ... 33 7.0

>tr|B5Z659|B5Z659_BACCE TrsD OS=Bacillus cereus H3081.97
GN=BCH308197_B0079 PE=4 SV=1
Length = 345

Score = 34.7 bits (78), Expect = 2.4
Identities = 21/68 (30%), Positives = 35/68 (51%)
Frame = +2

Query: 32 KEIGKQMSSLSHVDYMYIRQGLSMPRPQERRRRFPIISLPCGSNR*ALSNDQQLLPRITT 211
K K+M + S+ +Y+ +G+ R R+R+ II P G+NR +D + + T
Sbjct: 213 KNPSKRMLTKSYKEYV---EGIQKTRDMVARKRYVIIDQPIGNNREKSLSDIERKASLVT 269

Query: 212 KNGENLAT 235
N EN+ T
Sbjct: 270 ANLENMLT 277


>tr|Q03WG1|Q03WG1_LEUMM Permease of the major facilitator
superfamily OS=Leuconostoc mesenteroides subsp.
mesenteroides (strain ATCC 8293 / NCDO 523) GN=LEUM_1368
PE=4 SV=1
Length = 402

Score = 34.3 bits (77), Expect = 3.2
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 10/84 (11%)
Frame = -2

Query: 400 SAFVTCIFQFIVIRILLSISDRTKLRRAIALENNNLNSSVM*RSL----------AMKIP 251
+AFVT +F +V R ++ ISD T L L + N S++ R ++ P
Sbjct: 304 TAFVTSVFMLMVFRFIIGISDATMLPAVQTLLSKNSPSAMTGRIFSYNQSFQSIGSVMGP 363

Query: 250 AMGARGSQIFSIFGGYSWEQLLIV 179
GA + +F G + + LLIV
Sbjct: 364 MFGALVASVFDYRGIFIFSALLIV 387


>tr|Q9MB65|Q9MB65_MALDO 1-aminocyclopropane-1-carboxylate synthase
OS=Malus domestica GN=MdACS-5A PE=2 SV=1
Length = 487

Score = 33.1 bits (74), Expect = 7.0
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +2

Query: 173 LSNDQQLLPRITTKNGENLATPGSHCWNLHSK*PLHHT 286
LSN QQLL +I T NG +P W + P H T
Sbjct: 5 LSNQQQLLSKIATSNGHGENSPYFDGWKAYDSDPFHPT 42


>tr|Q97A39|Q97A39_THEVO Molybdenum cofactor biosynthesis protein
moeB OS=Thermoplasma volcanium GN=TV0971 PE=4 SV=1
Length = 305

Score = 33.1 bits (74), Expect = 7.0
Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 16/97 (16%)
Frame = -2

Query: 421 SFFGTRLSAFVTCIFQFIV--------IRILLS--------ISDRTKLRRAIALENNNLN 290
SF R++AF TC FQ+ + + I LS + D K R IAL N +
Sbjct: 5 SFIFLRIAAFTTCYFQYSIKACPYKCQVAIYLSNGPILKAMLQDDYKYARQIALRVFNAD 64

Query: 289 SSVM*RSLAMKIPAMGARGSQIFSIFGGYSWEQLLIV 179
R+ + + +G GS I +F ++L+IV
Sbjct: 65 DLKKIRNSVVSVIGVGGVGSLIADLFVRSGIKKLIIV 101