NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916088
Clone id YMU001_000082_H09
Library
Length 325
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000082_H09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TGAATCAACTTTGTGAGATTCTATCCAAACAGCATCCATGCCATCTTCACCATAAAGGAA
TTGAATGACATCACCGAGAGAGTTACGGACTGTTCCGTCATACTTTACCATAACATCCTC
CATAGCTTTGACTAACCTCCTCTGAATGTAACCTGTTTCAGAAGTTTATACGGCTGTATC
AATAAGCCCCTCTCTACCTCCCATTGCATGAAAGAAGAACTCCTGAGGTGTGAGCCCTCT
CAGGTAGGAGTACTCCACAAAACCACGACTTTCTGGCCCATAATCATCCTTTGTAAAGTG
TGGCAGAGTTCTATCAACAAATCCA
■■Homology search results ■■ -
sp_hit_id P18616
Definition sp|P18616|RPB1_ARATH DNA-directed RNA polymerase II subunit RPB1 OS=Arabidopsis thaliana
Align length 108
Score (bit) 207.0
E-value 1.0e-53
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916088|Adiantum capillus-veneris mRNA, clone:
YMU001_000082_H09.
         (325 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P18616|RPB1_ARATH DNA-directed RNA polymerase II subunit RPB1...   207   1e-53
sp|P35084|RPB1_DICDI DNA-directed RNA polymerase II subunit rpb1...   190   2e-48
sp|Q75A34|RPB1_ASHGO DNA-directed RNA polymerase II subunit RPB1...   186   2e-47
sp|P04050|RPB1_YEAST DNA-directed RNA polymerase II subunit RPB1...   186   4e-47
sp|A5DCV3|RPB1_PICGU DNA-directed RNA polymerase II subunit RPB1...   184   1e-46
sp|P36594|RPB1_SCHPO DNA-directed RNA polymerase II subunit rpb1...   176   3e-44
sp|P16356|RPB1_CAEEL DNA-directed RNA polymerase II subunit RPB1...   172   4e-43
sp|P35074|RPB1_CAEBR DNA-directed RNA polymerase II subunit RPB1...   172   4e-43
sp|P14248|RPB1_PLAFD DNA-directed RNA polymerase II subunit RPB1...   168   9e-42
sp|P04052|RPB1_DROME DNA-directed RNA polymerase II subunit RPB1...   164   2e-40
sp|P08775|RPB1_MOUSE DNA-directed RNA polymerase II subunit RPB1...   162   5e-40
sp|P24928|RPB1_HUMAN DNA-directed RNA polymerase II subunit RPB1...   162   5e-40
sp|Q8SSC4|RPB1_ENCCU DNA-directed RNA polymerase II subunit RPB1...   153   3e-37
sp|P17545|RPB1B_TRYBB DNA-directed RNA polymerase II subunit RPB...   140   2e-33
sp|P17546|RPB1A_TRYBB DNA-directed RNA polymerase II subunit RPB...   140   2e-33
sp|P08968|RPC1_TRYBB DNA-directed RNA polymerase III subunit RPC...   133   2e-31
sp|O94666|RPC1_SCHPO DNA-directed RNA polymerase III subunit rpc...   132   7e-31
sp|Q86AQ5|RPC1_DICDI DNA-directed RNA polymerase III subunit rpc...   132   7e-31
sp|O14802|RPC1_HUMAN DNA-directed RNA polymerase III subunit RPC...   131   9e-31
sp|Q5ZL98|RPC1_CHICK DNA-directed RNA polymerase III subunit RPC...   131   9e-31
sp|A4IF62|RPC1_BOVIN DNA-directed RNA polymerase III subunit RPC...   131   9e-31
sp|P31813|RPOA1_THECE DNA-directed RNA polymerase subunit A' OS=...   130   2e-30
sp|Q9HM79|RPOA1_HALSA DNA-directed RNA polymerase subunit A' OS=...   130   2e-30
sp|Q58445|RPOA1_METJA DNA-directed RNA polymerase subunit A' OS=...   129   4e-30
sp|Q6BI69|RPC1_DEBHA DNA-directed RNA polymerase III subunit RPC...   128   8e-30
sp|P04051|RPC1_YEAST DNA-directed RNA polymerase III subunit RPC...   127   2e-29
sp|Q980R2|RPOA1_SULSO DNA-directed RNA polymerase subunit A' OS=...   123   3e-28
sp|P11512|RPOA1_SULAC DNA-directed RNA polymerase subunit A' OS=...   123   3e-28
sp|P15349|RPOA1_HALMO DNA-directed RNA polymerase subunit A' (Fr...   123   3e-28
sp|P27625|RPC1_PLAFA DNA-directed RNA polymerase III subunit RPC...   123   3e-28

>sp|P18616|RPB1_ARATH DNA-directed RNA polymerase II subunit RPB1
            OS=Arabidopsis thaliana GN=RPB205 PE=1 SV=2
          Length = 1840

 Score =  207 bits (528), Expect = 1e-53
 Identities = 101/108 (93%), Positives = 103/108 (95%)
 Frame = -2

Query: 324  GFVDRTLPHFTKDDYGPESRGFVEYSYLRGLTPQEFFFHAMGGREGLIDTAV*TSETGYI 145
            GF  RTLPHFTKDDYGPESRGFVE SYLRGLTPQEFFFHAMGGREGLIDTAV TSETGYI
Sbjct: 798  GFDGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYI 857

Query: 144  QRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESHKVDS 1
            QRRLVKAMED+MVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES K+DS
Sbjct: 858  QRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDS 905


>sp|P35084|RPB1_DICDI DNA-directed RNA polymerase II subunit rpb1
            OS=Dictyostelium discoideum GN=polr2a PE=2 SV=2
          Length = 1727

 Score =  190 bits (483), Expect = 2e-48
 Identities = 91/108 (84%), Positives = 97/108 (89%)
 Frame = -2

Query: 324  GFVDRTLPHFTKDDYGPESRGFVEYSYLRGLTPQEFFFHAMGGREGLIDTAV*TSETGYI 145
            GF  RTLPHFTKDDYGPESRGFVE SYLRGLTPQEFFFHAMGGREGLIDTAV TSETGYI
Sbjct: 787  GFQSRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYI 846

Query: 144  QRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESHKVDS 1
            QRRLVKAMEDV +KYD TVRNSLGDVIQF YGEDG+D  ++E+  +DS
Sbjct: 847  QRRLVKAMEDVSIKYDATVRNSLGDVIQFAYGEDGIDGCFVENQSIDS 894


>sp|Q75A34|RPB1_ASHGO DNA-directed RNA polymerase II subunit RPB1
            OS=Ashbya gossypii GN=RPB1 PE=3 SV=1
          Length = 1745

 Score =  186 bits (473), Expect = 2e-47
 Identities = 87/108 (80%), Positives = 97/108 (89%)
 Frame = -2

Query: 324  GFVDRTLPHFTKDDYGPESRGFVEYSYLRGLTPQEFFFHAMGGREGLIDTAV*TSETGYI 145
            GF DRTLPHF+KDDY PES+GFVE SYLRGLTPQEFFFHAMGGREGLIDTAV T+ETGYI
Sbjct: 778  GFADRTLPHFSKDDYSPESKGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTAETGYI 837

Query: 144  QRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESHKVDS 1
            QRRLVKA+ED+MV YDGT RNSLG++IQF+YGEDGMDA  IE   +D+
Sbjct: 838  QRRLVKALEDIMVHYDGTTRNSLGNIIQFVYGEDGMDAAHIEKQSIDT 885


>sp|P04050|RPB1_YEAST DNA-directed RNA polymerase II subunit RPB1
            OS=Saccharomyces cerevisiae GN=RPB1 PE=1 SV=2
          Length = 1733

 Score =  186 bits (471), Expect = 4e-47
 Identities = 88/108 (81%), Positives = 97/108 (89%)
 Frame = -2

Query: 324  GFVDRTLPHFTKDDYGPESRGFVEYSYLRGLTPQEFFFHAMGGREGLIDTAV*TSETGYI 145
            GFVDRTLPHF+KDDY PES+GFVE SYLRGLTPQEFFFHAMGGREGLIDTAV T+ETGYI
Sbjct: 778  GFVDRTLPHFSKDDYSPESKGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTAETGYI 837

Query: 144  QRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESHKVDS 1
            QRRLVKA+ED+MV YD T RNSLG+VIQF+YGEDGMDA  IE   +D+
Sbjct: 838  QRRLVKALEDIMVHYDNTTRNSLGNVIQFIYGEDGMDAAHIEKQSLDT 885


>sp|A5DCV3|RPB1_PICGU DNA-directed RNA polymerase II subunit RPB1
           (Fragments) OS=Pichia guilliermondii GN=RPB1 PE=3 SV=2
          Length = 1579

 Score =  184 bits (467), Expect = 1e-46
 Identities = 86/107 (80%), Positives = 95/107 (88%)
 Frame = -2

Query: 324 GFVDRTLPHFTKDDYGPESRGFVEYSYLRGLTPQEFFFHAMGGREGLIDTAV*TSETGYI 145
           GF DR+LPHFTKDDY PES+GFVE SYLRGLTPQEFFFHAM GREGLIDTAV T+ETGYI
Sbjct: 610 GFADRSLPHFTKDDYSPESKGFVENSYLRGLTPQEFFFHAMAGREGLIDTAVKTAETGYI 669

Query: 144 QRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESHKVD 4
           QRRLVKA+ED+MV YDGT RNSLGD+IQF+YGEDG+D   +ES  VD
Sbjct: 670 QRRLVKALEDIMVHYDGTTRNSLGDIIQFVYGEDGVDGTQVESQSVD 716


>sp|P36594|RPB1_SCHPO DNA-directed RNA polymerase II subunit rpb1
            OS=Schizosaccharomyces pombe GN=rpb1 PE=1 SV=1
          Length = 1752

 Score =  176 bits (446), Expect = 3e-44
 Identities = 85/108 (78%), Positives = 93/108 (86%)
 Frame = -2

Query: 324  GFVDRTLPHFTKDDYGPESRGFVEYSYLRGLTPQEFFFHAMGGREGLIDTAV*TSETGYI 145
            GF  RTLPHF KDD  PESRGF+E SYLRGLTPQEFFFHAM GREGLIDTAV T+ETGYI
Sbjct: 784  GFKYRTLPHFPKDDDSPESRGFIENSYLRGLTPQEFFFHAMAGREGLIDTAVKTAETGYI 843

Query: 144  QRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESHKVDS 1
            QRRLVKAMEDVMV+YDGTVRN++GD+IQF YGEDG+DA  +E    DS
Sbjct: 844  QRRLVKAMEDVMVRYDGTVRNAMGDIIQFAYGEDGLDATLVEYQVFDS 891


>sp|P16356|RPB1_CAEEL DNA-directed RNA polymerase II subunit RPB1
            OS=Caenorhabditis elegans GN=ama-1 PE=1 SV=2
          Length = 1852

 Score =  172 bits (437), Expect = 4e-43
 Identities = 80/106 (75%), Positives = 90/106 (84%)
 Frame = -2

Query: 324  GFVDRTLPHFTKDDYGPESRGFVEYSYLRGLTPQEFFFHAMGGREGLIDTAV*TSETGYI 145
            GF  RTLPHF KDDYGPES+GFVE SYL GLTP EFFFHAMGGREGLIDTAV T+ETGYI
Sbjct: 791  GFRHRTLPHFIKDDYGPESKGFVENSYLAGLTPSEFFFHAMGGREGLIDTAVKTAETGYI 850

Query: 144  QRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESHKV 7
            QRRL+KAME VMV YDGTVRNSL  ++Q  YGEDG+D +W+E+  +
Sbjct: 851  QRRLIKAMESVMVNYDGTVRNSLAQMVQLRYGEDGLDGMWVENQNM 896


>sp|P35074|RPB1_CAEBR DNA-directed RNA polymerase II subunit RPB1
            OS=Caenorhabditis briggsae GN=ama-1 PE=3 SV=2
          Length = 1853

 Score =  172 bits (437), Expect = 4e-43
 Identities = 80/106 (75%), Positives = 90/106 (84%)
 Frame = -2

Query: 324  GFVDRTLPHFTKDDYGPESRGFVEYSYLRGLTPQEFFFHAMGGREGLIDTAV*TSETGYI 145
            GF  RTLPHF KDDYGPES+GFVE SYL GLTP EFFFHAMGGREGLIDTAV T+ETGYI
Sbjct: 795  GFRHRTLPHFIKDDYGPESKGFVENSYLAGLTPSEFFFHAMGGREGLIDTAVKTAETGYI 854

Query: 144  QRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESHKV 7
            QRRL+KAME VMV YDGTVRNSL  ++Q  YGEDG+D +W+E+  +
Sbjct: 855  QRRLIKAMESVMVNYDGTVRNSLAQMVQLRYGEDGLDGMWVENQNM 900


>sp|P14248|RPB1_PLAFD DNA-directed RNA polymerase II subunit RPB1
            OS=Plasmodium falciparum (isolate CDC / Honduras) GN=RPII
            PE=3 SV=1
          Length = 2452

 Score =  168 bits (425), Expect = 9e-42
 Identities = 82/107 (76%), Positives = 89/107 (83%)
 Frame = -2

Query: 324  GFVDRTLPHFTKDDYGPESRGFVEYSYLRGLTPQEFFFHAMGGREGLIDTAV*TSETGYI 145
            GF  R+LPHF K DYGPESRGFV  SYL GLTPQE FFHAMGGREG+IDTA  TSETGYI
Sbjct: 938  GFNHRSLPHFIKFDYGPESRGFVSNSYLSGLTPQEVFFHAMGGREGIIDTACKTSETGYI 997

Query: 144  QRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESHKVD 4
            QRRL+KAMEDVMV+YD TVRNS GD+IQFLYGEDGM   +IE   +D
Sbjct: 998  QRRLIKAMEDVMVQYDRTVRNSYGDIIQFLYGEDGMAGEYIEDQIID 1044


>sp|P04052|RPB1_DROME DNA-directed RNA polymerase II subunit RPB1
            OS=Drosophila melanogaster GN=RpII215 PE=1 SV=4
          Length = 1887

 Score =  164 bits (414), Expect = 2e-40
 Identities = 79/102 (77%), Positives = 86/102 (84%)
 Frame = -2

Query: 324  GFVDRTLPHFTKDDYGPESRGFVEYSYLRGLTPQEFFFHAMGGREGLIDTAV*TSETGYI 145
            GF  RTLPHF KDDYGPESRGFVE SYL GLTP EF+FHAMGGREGLIDTAV T+ETGYI
Sbjct: 793  GFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGLIDTAVKTAETGYI 852

Query: 144  QRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 19
            QRRL+KAME VMV YDGTVRNS+G +IQ  YGEDG+    +E
Sbjct: 853  QRRLIKAMESVMVNYDGTVRNSVGQLIQLRYGEDGLCGELVE 894
tr_hit_id Q71ET7
Definition tr|Q71ET7|Q71ET7_MAIZE DNA-directed RNA polymerase (Fragment) OS=Zea mays
Align length 108
Score (bit) 213.0
E-value 5.0e-54
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916088|Adiantum capillus-veneris mRNA, clone:
YMU001_000082_H09.
         (325 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q71ET7|Q71ET7_MAIZE DNA-directed RNA polymerase (Fragment) OS...   213   5e-54
tr|Q71ET6|Q71ET6_MAGSO DNA-directed RNA polymerase (Fragment) OS...   213   5e-54
tr|Q71ET5|Q71ET5_NYMOD DNA-directed RNA polymerase (Fragment) OS...   213   5e-54
tr|B8BAW1|B8BAW1_ORYSI Putative uncharacterized protein OS=Oryza...   213   5e-54
tr|B7SNX2|B7SNX2_PAPOR RNA polymerase II largest subunit (Fragme...   213   5e-54
tr|B7SNX0|B7SNX0_LIRTU RNA polymerase II largest subunit (Fragme...   213   5e-54
tr|B7SNW9|B7SNW9_ILLPA RNA polymerase II largest subunit (Fragme...   213   5e-54
tr|B7SNW7|B7SNW7_CERDE RNA polymerase II largest subunit (Fragme...   213   5e-54
tr|B7SNW6|B7SNW6_BETVU RNA polymerase II largest subunit (Fragme...   213   5e-54
tr|Q71ET3|Q71ET3_PSINU DNA-directed RNA polymerase (Fragment) OS...   212   6e-54
tr|A9U396|A9U396_PHYPA DNA-directed RNA polymerase OS=Physcomitr...   212   6e-54
tr|A9TK89|A9TK89_PHYPA DNA-directed RNA polymerase OS=Physcomitr...   212   6e-54
tr|B7SNX4|B7SNX4_PEA RNA polymerase II largest subunit (Fragment...   211   1e-53
tr|B7SNX1|B7SNX1_TOBAC RNA polymerase II largest subunit (Fragme...   211   1e-53
tr|A7NVN7|A7NVN7_VITVI DNA-directed RNA polymerase OS=Vitis vini...   211   1e-53
tr|Q71ET4|Q71ET4_AMBTC DNA-directed RNA polymerase (Fragment) OS...   210   2e-53
tr|Q1L5Z5|Q1L5Z5_RHOMC DNA-directed RNA polymerase (Fragment) OS...   210   2e-53
tr|Q1L5Y6|Q1L5Y6_SOLLC DNA-directed RNA polymerase (Fragment) OS...   210   2e-53
tr|A3BPR9|A3BPR9_ORYSJ DNA-directed RNA polymerase OS=Oryza sati...   210   2e-53
tr|Q1L5Y7|Q1L5Y7_ANTMA DNA-directed RNA polymerase (Fragment) OS...   209   7e-53
tr|O04144|O04144_9VIRI DNA-directed RNA polymerase (Fragment) OS...   209   7e-53
tr|B7SNW5|B7SNW5_ASPOF RNA polymerase II largest subunit (Fragme...   207   2e-52
tr|Q5WMZ9|Q5WMZ9_ORYSJ DNA-directed RNA polymerase OS=Oryza sati...   207   2e-52
tr|Q0DKN9|Q0DKN9_ORYSJ DNA-directed RNA polymerase OS=Oryza sati...   207   2e-52
tr|A3B018|A3B018_ORYSJ DNA-directed RNA polymerase OS=Oryza sati...   207   2e-52
tr|Q71EU0|Q71EU0_CYCRE DNA-directed RNA polymerase (Fragment) OS...   206   6e-52
tr|B7SNX5|B7SNX5_SARHE RNA polymerase II largest subunit (Fragme...   206   6e-52
tr|B7SNW8|B7SNW8_DRIWI RNA polymerase II largest subunit (Fragme...   205   8e-52
tr|B7SNX3|B7SNX3_PERAE RNA polymerase II largest subunit (Fragme...   204   1e-51
tr|Q71ET9|Q71ET9_9CONI DNA-directed RNA polymerase (Fragment) OS...   204   2e-51

>tr|Q71ET7|Q71ET7_MAIZE DNA-directed RNA polymerase (Fragment) OS=Zea
            mays GN=RPB1 PE=2 SV=1
          Length = 1009

 Score =  213 bits (541), Expect = 5e-54
 Identities = 102/108 (94%), Positives = 105/108 (97%)
 Frame = -2

Query: 324  GFVDRTLPHFTKDDYGPESRGFVEYSYLRGLTPQEFFFHAMGGREGLIDTAV*TSETGYI 145
            GF+DRTLPHFTKDDYGPESRGFVE SYLRGLTPQEFFFHAMGGREGLIDTAV TSETGYI
Sbjct: 714  GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYI 773

Query: 144  QRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESHKVDS 1
            QRRLVKAMED+MVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES K+DS
Sbjct: 774  QRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDS 821


>tr|Q71ET6|Q71ET6_MAGSO DNA-directed RNA polymerase (Fragment)
            OS=Magnolia soulangeana GN=RPB1 PE=2 SV=1
          Length = 1010

 Score =  213 bits (541), Expect = 5e-54
 Identities = 102/108 (94%), Positives = 105/108 (97%)
 Frame = -2

Query: 324  GFVDRTLPHFTKDDYGPESRGFVEYSYLRGLTPQEFFFHAMGGREGLIDTAV*TSETGYI 145
            GF+DRTLPHFTKDDYGPESRGFVE SYLRGLTPQEFFFHAMGGREGLIDTAV TSETGYI
Sbjct: 715  GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYI 774

Query: 144  QRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESHKVDS 1
            QRRLVKAMED+MVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES K+DS
Sbjct: 775  QRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDS 822


>tr|Q71ET5|Q71ET5_NYMOD DNA-directed RNA polymerase (Fragment)
            OS=Nymphaea odorata GN=RPB1 PE=2 SV=1
          Length = 1013

 Score =  213 bits (541), Expect = 5e-54
 Identities = 102/108 (94%), Positives = 105/108 (97%)
 Frame = -2

Query: 324  GFVDRTLPHFTKDDYGPESRGFVEYSYLRGLTPQEFFFHAMGGREGLIDTAV*TSETGYI 145
            GF+DRTLPHFTKDDYGPESRGFVE SYLRGLTPQEFFFHAMGGREGLIDTAV TSETGYI
Sbjct: 718  GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYI 777

Query: 144  QRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESHKVDS 1
            QRRLVKAMED+MVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES K+DS
Sbjct: 778  QRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDS 825


>tr|B8BAW1|B8BAW1_ORYSI Putative uncharacterized protein OS=Oryza
            sativa subsp. indica GN=OsI_27866 PE=4 SV=1
          Length = 1449

 Score =  213 bits (541), Expect = 5e-54
 Identities = 102/108 (94%), Positives = 105/108 (97%)
 Frame = -2

Query: 324  GFVDRTLPHFTKDDYGPESRGFVEYSYLRGLTPQEFFFHAMGGREGLIDTAV*TSETGYI 145
            GF+DRTLPHFTKDDYGPESRGFVE SYLRGLTPQEFFFHAMGGREGLIDTAV TSETGYI
Sbjct: 766  GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYI 825

Query: 144  QRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESHKVDS 1
            QRRLVKAMED+MVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES K+DS
Sbjct: 826  QRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDS 873


>tr|B7SNX2|B7SNX2_PAPOR RNA polymerase II largest subunit (Fragment)
            OS=Papaver orientale GN=rpb1 PE=2 SV=1
          Length = 1010

 Score =  213 bits (541), Expect = 5e-54
 Identities = 102/108 (94%), Positives = 105/108 (97%)
 Frame = -2

Query: 324  GFVDRTLPHFTKDDYGPESRGFVEYSYLRGLTPQEFFFHAMGGREGLIDTAV*TSETGYI 145
            GF+DRTLPHFTKDDYGPESRGFVE SYLRGLTPQEFFFHAMGGREGLIDTAV TSETGYI
Sbjct: 715  GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYI 774

Query: 144  QRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESHKVDS 1
            QRRLVKAMED+MVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES K+DS
Sbjct: 775  QRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDS 822


>tr|B7SNX0|B7SNX0_LIRTU RNA polymerase II largest subunit (Fragment)
            OS=Liriodendron tulipifera GN=rpb1 PE=2 SV=1
          Length = 1010

 Score =  213 bits (541), Expect = 5e-54
 Identities = 102/108 (94%), Positives = 105/108 (97%)
 Frame = -2

Query: 324  GFVDRTLPHFTKDDYGPESRGFVEYSYLRGLTPQEFFFHAMGGREGLIDTAV*TSETGYI 145
            GF+DRTLPHFTKDDYGPESRGFVE SYLRGLTPQEFFFHAMGGREGLIDTAV TSETGYI
Sbjct: 715  GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYI 774

Query: 144  QRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESHKVDS 1
            QRRLVKAMED+MVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES K+DS
Sbjct: 775  QRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDS 822


>tr|B7SNW9|B7SNW9_ILLPA RNA polymerase II largest subunit (Fragment)
            OS=Illicium parviflorum GN=rpb1 PE=2 SV=1
          Length = 1013

 Score =  213 bits (541), Expect = 5e-54
 Identities = 102/108 (94%), Positives = 105/108 (97%)
 Frame = -2

Query: 324  GFVDRTLPHFTKDDYGPESRGFVEYSYLRGLTPQEFFFHAMGGREGLIDTAV*TSETGYI 145
            GF+DRTLPHFTKDDYGPESRGFVE SYLRGLTPQEFFFHAMGGREGLIDTAV TSETGYI
Sbjct: 718  GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYI 777

Query: 144  QRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESHKVDS 1
            QRRLVKAMED+MVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES K+DS
Sbjct: 778  QRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDS 825


>tr|B7SNW7|B7SNW7_CERDE RNA polymerase II largest subunit (Fragment)
            OS=Ceratophyllum demersum GN=rpb1 PE=2 SV=1
          Length = 1010

 Score =  213 bits (541), Expect = 5e-54
 Identities = 102/108 (94%), Positives = 105/108 (97%)
 Frame = -2

Query: 324  GFVDRTLPHFTKDDYGPESRGFVEYSYLRGLTPQEFFFHAMGGREGLIDTAV*TSETGYI 145
            GF+DRTLPHFTKDDYGPESRGFVE SYLRGLTPQEFFFHAMGGREGLIDTAV TSETGYI
Sbjct: 715  GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYI 774

Query: 144  QRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESHKVDS 1
            QRRLVKAMED+MVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES K+DS
Sbjct: 775  QRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDS 822


>tr|B7SNW6|B7SNW6_BETVU RNA polymerase II largest subunit (Fragment)
            OS=Beta vulgaris GN=rpb1 PE=2 SV=1
          Length = 1012

 Score =  213 bits (541), Expect = 5e-54
 Identities = 102/108 (94%), Positives = 105/108 (97%)
 Frame = -2

Query: 324  GFVDRTLPHFTKDDYGPESRGFVEYSYLRGLTPQEFFFHAMGGREGLIDTAV*TSETGYI 145
            GF+DRTLPHFTKDDYGPESRGFVE SYLRGLTPQEFFFHAMGGREGLIDTAV TSETGYI
Sbjct: 717  GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYI 776

Query: 144  QRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESHKVDS 1
            QRRLVKAMED+MVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES K+DS
Sbjct: 777  QRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDS 824


>tr|Q71ET3|Q71ET3_PSINU DNA-directed RNA polymerase (Fragment)
            OS=Psilotum nudum GN=RPB1 PE=2 SV=1
          Length = 1013

 Score =  212 bits (540), Expect = 6e-54
 Identities = 103/108 (95%), Positives = 105/108 (97%)
 Frame = -2

Query: 324  GFVDRTLPHFTKDDYGPESRGFVEYSYLRGLTPQEFFFHAMGGREGLIDTAV*TSETGYI 145
            GFVDRTLPHFTKDDYGPESRGFVE SYLRGLTPQEFFFHAMGGREGLIDTAV TSETGYI
Sbjct: 718  GFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYI 777

Query: 144  QRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESHKVDS 1
            QRRLVKAMEDVMVKYDGTVRNSLGDVI+FLYGEDGMDAVWIES K+DS
Sbjct: 778  QRRLVKAMEDVMVKYDGTVRNSLGDVIEFLYGEDGMDAVWIESQKLDS 825