BP916091
Clone id YMU001_000083_A04
Library
Length 337
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000083_A04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GCTGTCTATGTAGCCAGAATCCTCGGCCCAAGGCTTTTCTCTTGAGCTAACTTTCCCTTT
AGAATCTTGCTCCTCTTCTTTCTGTAGTAATATTGACGTTGCACGCCCCATTCCTGCTTG
TAACAAATCCTTTGCAGGCTTTGCTTTGTCCTTGACACTAGTTGCTTTAGGAGTGCCCTG
TTTCATAGCTTCTTGACCTGACTGTGCACTCGCAAGAAGTGCCTGCCGCCGTGCAGACGG
CATTCTATTCAACAATCAAACGTAACTGTACTGTGAGCCACTTTCGAACGAATCATATGT
GACTTGATTGCAGCCAGCAATGGGAGCCGGACTATAA
■■Homology search results ■■ -
sp_hit_id Q86Y26
Definition sp|Q86Y26|NUT_HUMAN Protein NUT OS=Homo sapiens
Align length 77
Score (bit) 32.7
E-value 0.58
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916091|Adiantum capillus-veneris mRNA, clone:
YMU001_000083_A04.
(337 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q86Y26|NUT_HUMAN Protein NUT OS=Homo sapiens GN=NUT PE=1 SV=1 33 0.58
sp|P20075|LEAD8_DAUCA Embryonic protein DC-8 OS=Daucus carota PE... 30 2.9
sp|A8DZE6|WTIP_DANRE Wilms tumor protein 1-interacting protein h... 30 4.9
sp|A5PLF5|TM2D3_DANRE TM2 domain-containing protein 3 OS=Danio r... 29 6.4
sp|P03379|ENV_VILV Envelope glycoprotein gp160 OS=Maedi visna vi... 29 6.4
sp|Q9ZV71|B3GT3_ARATH Probable beta-1,3-galactosyltransferase 3 ... 29 6.4
sp|Q8VQ99|SRAP_STAAU Serine-rich adhesin for platelets OS=Staphy... 29 8.4
sp|A9L3F5|PYRC_SHEB9 Dihydroorotase OS=Shewanella baltica (strai... 29 8.4
sp|A6WK08|PYRC_SHEB8 Dihydroorotase OS=Shewanella baltica (strai... 29 8.4
sp|A3D7V9|PYRC_SHEB5 Dihydroorotase OS=Shewanella baltica (strai... 29 8.4
sp|A1S9L6|PYRC_SHEAM Dihydroorotase OS=Shewanella amazonensis (s... 29 8.4
sp|Q1PE04|FBL25_ARATH F-box/LRR-repeat protein 25 OS=Arabidopsis... 29 8.4
sp|A7ESL8|DBP4_SCLS1 ATP-dependent RNA helicase dbp4 OS=Scleroti... 29 8.4
sp|O49954|GCSP_SOLTU Glycine dehydrogenase [decarboxylating], mi... 29 8.4

>sp|Q86Y26|NUT_HUMAN Protein NUT OS=Homo sapiens GN=NUT PE=1 SV=1
Length = 1132

Score = 32.7 bits (73), Expect = 0.58
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Frame = -2

Query: 240 PSARRQALLASAQSGQEAMKQGTPKATSVKD---KAKPAKDLLQAGMGRATSILLQKEEE 70
P + LA Q QE+ GTPKATS P + A + R TS+
Sbjct: 938 PDLSKPKNLAPLQESQESYTTGTPKATSSHQGLGSTLPRRGTRNAIVPRETSVSKTHRSA 997

Query: 69 QDSKGKVSSREKPWAED 19
+KGK +++ ED
Sbjct: 998 DRAKGKEKKKKEAEEED 1014


>sp|P20075|LEAD8_DAUCA Embryonic protein DC-8 OS=Daucus carota PE=3
SV=1
Length = 555

Score = 30.4 bits (67), Expect = 2.9
Identities = 18/54 (33%), Positives = 21/54 (38%)
Frame = -2

Query: 198 GQEAMKQGTPKATSVKDKAKPAKDLLQAGMGRATSILLQKEEEQDSKGKVSSRE 37
G+E KA K+KAK AKD G QK EE K + E
Sbjct: 93 GREGGDVAAQKAEEAKEKAKMAKDTTMGKAGEYKDYTAQKAEEAKEKAAQKAEE 146


>sp|A8DZE6|WTIP_DANRE Wilms tumor protein 1-interacting protein
homolog OS=Danio rerio GN=wtip PE=3 SV=1
Length = 648

Score = 29.6 bits (65), Expect = 4.9
Identities = 17/79 (21%), Positives = 33/79 (41%)
Frame = -2

Query: 246 RMPSARRQALLASAQSGQEAMKQGTPKATSVKDKAKPAKDLLQAGMGRATSILLQKEEEQ 67
R + ++ LAS+ S Q+ K +P+++ + P L+ G G TS++ +
Sbjct: 153 RYTATSPRSSLASSHSSQDQSKHTSPRSSI----SSPRSSLVSPGQGEGTSVISPRSSYA 208

Query: 66 DSKGKVSSREKPWAEDSGY 10
+ S P + Y
Sbjct: 209 STASDTSKHSSPRTSLNSY 227


>sp|A5PLF5|TM2D3_DANRE TM2 domain-containing protein 3 OS=Danio
rerio GN=tm2d3 PE=2 SV=2
Length = 244

Score = 29.3 bits (64), Expect = 6.4
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1

Query: 127 ILCRLCFVLDTSCFRSALFHSFLT*LCTRKKCLPPC 234
+LCR CF LD S +R + +T C R++ C
Sbjct: 120 LLCRFCFQLDASQYRCSNSSDCMTVSCPRRRYNASC 155


>sp|P03379|ENV_VILV Envelope glycoprotein gp160 OS=Maedi visna virus
(strain 1514) GN=env PE=1 SV=1
Length = 982

Score = 29.3 bits (64), Expect = 6.4
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = -2

Query: 189 AMKQGTPKATSVKDKAKPAKDLLQAGMGRATSILLQKEEEQDSKGKVSSREKPW 28
A K+ P T+ +D P ++ + + Q++EE++ +G VS ++K W
Sbjct: 2 ASKESKPSRTTWRDMEPPLRETWNQVLQEL--VKRQQQEEEEQQGLVSGKKKSW 53


>sp|Q9ZV71|B3GT3_ARATH Probable beta-1,3-galactosyltransferase 3
OS=Arabidopsis thaliana GN=B3GALT3 PE=2 SV=1
Length = 409

Score = 29.3 bits (64), Expect = 6.4
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = -2

Query: 216 LASAQSGQEAMKQGTPKATSVKDKAKPAKD--LLQAGMGRATSILLQKEEEQDSKGKVSS 43
LA+A+S QE++ G P + ++ K P K L+ G+ A S +++ + +
Sbjct: 109 LAAARSAQESLVNGAPISNDMEKKQLPGKRRYLMVVGINTAFSSRKRRDSVRTTWMPSGE 168

Query: 42 REKPWAEDSGYI 7
+ K E+ G I
Sbjct: 169 KRKKLEEEKGII 180


>sp|Q8VQ99|SRAP_STAAU Serine-rich adhesin for platelets
OS=Staphylococcus aureus GN=sraP PE=3 SV=1
Length = 2283

Score = 28.9 bits (63), Expect = 8.4
Identities = 23/101 (22%), Positives = 43/101 (42%)
Frame = -2

Query: 318 AGCNQVTYDSFESGSQYSYV*LLNRMPSARRQALLASAQSGQEAMKQGTPKATSVKDKAK 139
A NQ DS + S ++ S + ++QS ++ + T +TS+ D
Sbjct: 1393 ASMNQSGVDSNSASQSASTSTSISTSESDSQSTSTYTSQSTSQS--ESTSTSTSISDSTS 1450

Query: 138 PAKDLLQAGMGRATSILLQKEEEQDSKGKVSSREKPWAEDS 16
+K Q+G ++ L E E DS+ +S + +E +
Sbjct: 1451 ISKSTSQSGSTSTSASLSGSESESDSQSVSTSASESTSESA 1491


>sp|A9L3F5|PYRC_SHEB9 Dihydroorotase OS=Shewanella baltica (strain
OS195) GN=pyrC PE=3 SV=1
Length = 343

Score = 28.9 bits (63), Expect = 8.4
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -2

Query: 237 SARRQALLASAQSGQEAMKQGTPKATSVKDKAKPA 133
+ +QALLA+A SG + GT A KDK + A
Sbjct: 225 NTHQQALLAAAASGSKKFFLGTDSAPHAKDKKEAA 259


>sp|A6WK08|PYRC_SHEB8 Dihydroorotase OS=Shewanella baltica (strain
OS185) GN=pyrC PE=3 SV=1
Length = 343

Score = 28.9 bits (63), Expect = 8.4
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -2

Query: 237 SARRQALLASAQSGQEAMKQGTPKATSVKDKAKPA 133
+ +QALLA+A SG + GT A KDK + A
Sbjct: 225 NTHQQALLAAAASGSKKFFLGTDSAPHAKDKKEAA 259


>sp|A3D7V9|PYRC_SHEB5 Dihydroorotase OS=Shewanella baltica (strain
OS155 / ATCC BAA-1091) GN=pyrC PE=3 SV=1
Length = 343

Score = 28.9 bits (63), Expect = 8.4
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -2

Query: 237 SARRQALLASAQSGQEAMKQGTPKATSVKDKAKPA 133
+ +QALLA+A SG + GT A KDK + A
Sbjct: 225 NTHQQALLAAAASGSKKFFLGTDSAPHAKDKKEAA 259


tr_hit_id A0CIL4
Definition tr|A0CIL4|A0CIL4_PARTE Chromosome undetermined scaffold_19, whole genome shotgun sequence OS=Paramecium tetraurelia
Align length 58
Score (bit) 38.1
E-value 0.22
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916091|Adiantum capillus-veneris mRNA, clone:
YMU001_000083_A04.
(337 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A0CIL4|A0CIL4_PARTE Chromosome undetermined scaffold_19, whol... 38 0.22
tr|B6MTU3|B6MTU3_BRAFL Putative uncharacterized protein OS=Branc... 37 0.50
tr|B3L3K3|B3L3K3_PLAKH RhoGAP protein, putative OS=Plasmodium kn... 35 1.9
tr|A9NRA7|A9NRA7_PICSI Putative uncharacterized protein OS=Picea... 33 5.5
tr|Q65WZ5|Q65WZ5_ORYSJ Putative uncharacterized protein P0617A08... 33 7.2
tr|A3B0G9|A3B0G9_ORYSJ Putative uncharacterized protein OS=Oryza... 33 7.2
tr|A2XXE0|A2XXE0_ORYSI Putative uncharacterized protein OS=Oryza... 33 7.2
tr|Q99YA1|Q99YA1_STRP1 Putative uncharacterized protein (Putativ... 33 9.3
tr|Q8NZK7|Q8NZK7_STRP8 Putative ABC transporter OS=Streptococcus... 33 9.3
tr|Q8K601|Q8K601_STRP3 Putative ferrichrome ABC transporter (Fer... 33 9.3
tr|Q5XAA7|Q5XAA7_STRP6 Putative uncharacterized protein OS=Strep... 33 9.3
tr|Q48RN1|Q48RN1_STRPM Putative heme binding protein OS=Streptoc... 33 9.3
tr|Q1JKA3|Q1JKA3_STRPC Putative uncharacterized protein shp OS=S... 33 9.3
tr|Q1JF97|Q1JF97_STRPD Putative uncharacterized protein shp OS=S... 33 9.3
tr|Q1JA53|Q1JA53_STRPB Putative uncharacterized protein shp OS=S... 33 9.3
tr|Q1J548|Q1J548_STRPF Putative uncharacterized protein shp OS=S... 33 9.3
tr|B5XI18|B5XI18_STRPZ Ferrichrome-binding periplasmic protein O... 33 9.3
tr|A2RCT6|A2RCT6_STRPG Putative membrane protein OS=Streptococcu... 33 9.3
tr|Q06A48|Q06A48_STRPY Cell surface heme-binding protein OS=Stre... 33 9.3
tr|B3Z1U9|B3Z1U9_BACCE Ferrichrome-binding protein (Fragment) OS... 33 9.3
tr|B7Z7Y4|B7Z7Y4_HUMAN cDNA FLJ58711, highly similar to Homo sap... 33 9.3
tr|B4DZ00|B4DZ00_HUMAN cDNA FLJ58648, highly similar to Homo sap... 33 9.3

>tr|A0CIL4|A0CIL4_PARTE Chromosome undetermined scaffold_19, whole
genome shotgun sequence OS=Paramecium tetraurelia
GN=GSPATT00007766001 PE=4 SV=1
Length = 2108

Score = 38.1 bits (87), Expect = 0.22
Identities = 16/58 (27%), Positives = 38/58 (65%)
Frame = -2

Query: 231 RRQALLASAQSGQEAMKQGTPKATSVKDKAKPAKDLLQAGMGRATSILLQKEEEQDSK 58
R+Q+++ QSG + +KQG+P+ +K + + K+ + + + +S++ QK+++QD +
Sbjct: 23 RKQSIIQQFQSGTQIVKQGSPQKV-IKQEKENRKESIDSSLNSRSSLVKQKKKKQDKE 79


>tr|B6MTU3|B6MTU3_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_124658 PE=4 SV=1
Length = 1126

Score = 37.0 bits (84), Expect = 0.50
Identities = 21/79 (26%), Positives = 35/79 (44%)
Frame = -2

Query: 255 LLNRMPSARRQALLASAQSGQEAMKQGTPKATSVKDKAKPAKDLLQAGMGRATSILLQKE 76
LL + S + A +G+ K P A KD+ P A GR I+ ++E
Sbjct: 918 LLEELDSDLEEEAAGKAATGRRGQKATNPGAKGGKDRGTPGSGFKMAADGR--MIITEEE 975

Query: 75 EEQDSKGKVSSREKPWAED 19
E+++ +GK + K +D
Sbjct: 976 EDEEDQGKKRQKRKSAGDD 994


>tr|B3L3K3|B3L3K3_PLAKH RhoGAP protein, putative OS=Plasmodium
knowlesi (strain H) GN=PKH_080590 PE=4 SV=1
Length = 533

Score = 35.0 bits (79), Expect = 1.9
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = -2

Query: 207 AQSGQEAMKQGTPKATSVKDKAKPAKDLLQAGMGRATSILLQKEEEQDSKGKVSSREK 34
A+SG EA ++G PK K KD LQ+G + S +E +++S+ + S E+
Sbjct: 443 AKSGSEASEKGDPKKEDATQKGTMEKDALQSGESKKKS---DEETDEESESESESEEE 497


>tr|A9NRA7|A9NRA7_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 199

Score = 33.5 bits (75), Expect = 5.5
Identities = 31/108 (28%), Positives = 49/108 (45%)
Frame = -2

Query: 336 YSPAPIAGCNQVTYDSFESGSQYSYV*LLNRMPSARRQALLASAQSGQEAMKQGTPKATS 157
YSPA A + T D + + S L P++ +A SAQ QE + +A
Sbjct: 43 YSPAEEAPSAEKTVDESPARVEKSADELPITPPTSEIEA--ESAQLEQEEAAKPVEEADQ 100

Query: 156 VKDKAKPAKDLLQAGMGRATSILLQKEEEQDSKGKVSSREKPWAEDSG 13
V +A+PAK+ A + + +K+EE K K + + AE+ G
Sbjct: 101 VPKEAEPAKEESIAQAPAYAASVEEKDEESSGKEKTLAAVETAAEEKG 148


>tr|Q65WZ5|Q65WZ5_ORYSJ Putative uncharacterized protein P0617A08.8
OS=Oryza sativa subsp. japonica GN=P0617A08.8 PE=4 SV=1
Length = 501

Score = 33.1 bits (74), Expect = 7.2
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = -2

Query: 237 SARRQALLASAQSGQEAMKQGTPKATSVKDKAKPA 133
+A ++A SAQSG E + GTP TS + K+ PA
Sbjct: 253 AADKKASTTSAQSGDEVVTSGTPVVTSPRAKSAPA 287


>tr|A3B0G9|A3B0G9_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_016541 PE=4 SV=1
Length = 98

Score = 33.1 bits (74), Expect = 7.2
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = -2

Query: 237 SARRQALLASAQSGQEAMKQGTPKATSVKDKAKPA 133
+A ++A SAQSG E + GTP TS + K+ PA
Sbjct: 44 AADKKASTTSAQSGDEVVTSGTPVVTSPRAKSAPA 78


>tr|A2XXE0|A2XXE0_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_17344 PE=4 SV=1
Length = 259

Score = 33.1 bits (74), Expect = 7.2
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -2

Query: 213 ASAQSGQEAMKQGTPKATSVKDKAKPAKDLLQAGMGRA 100
A++++ A + KA VKD+AK A D+ QA GRA
Sbjct: 126 AASRATDRAKHEAADKAADVKDRAKDAADMAQARRGRA 163


>tr|Q99YA1|Q99YA1_STRP1 Putative uncharacterized protein (Putative
heme binding protein) OS=Streptococcus pyogenes serotype
M1 GN=shp PE=4 SV=1
Length = 291

Score = 32.7 bits (73), Expect = 9.3
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = -2

Query: 180 QGTPKATSVKDKAKPAKDLLQAGMGRATSILLQKEEEQDSKGKVS 46
Q PKA S +K+ K +L + MG TS+ L+KE++ SK +S
Sbjct: 216 QNKPKANSSNNKSLSDKKILPSKMGLTTSLELKKEDKFRSKKDLS 260


>tr|Q8NZK7|Q8NZK7_STRP8 Putative ABC transporter OS=Streptococcus
pyogenes serotype M18 GN=spyM18_1867 PE=4 SV=1
Length = 580

Score = 32.7 bits (73), Expect = 9.3
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = -2

Query: 180 QGTPKATSVKDKAKPAKDLLQAGMGRATSILLQKEEEQDSKGKVS 46
Q PKA S +K+ K +L + MG TS+ L+KE++ SK +S
Sbjct: 216 QNKPKANSSNNKSLSDKKILPSKMGLTTSLELKKEDKFRSKKDLS 260


>tr|Q8K601|Q8K601_STRP3 Putative ferrichrome ABC transporter
(Ferrichrome-binding protein) (Putative uncharacterized
protein SPs0307) OS=Streptococcus pyogenes serotype M3
GN=fhuD.2 PE=4 SV=1
Length = 580

Score = 32.7 bits (73), Expect = 9.3
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = -2

Query: 180 QGTPKATSVKDKAKPAKDLLQAGMGRATSILLQKEEEQDSKGKVS 46
Q PKA S +K+ K +L + MG TS+ L+KE++ SK +S
Sbjct: 216 QNKPKANSSNNKSLSDKKILPSKMGLTTSLELKKEDKFRSKKDLS 260