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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916094
Clone id YMU001_000083_A08
Library
Length 402
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000083_A08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GCGTGCATAAGCACGATCTAAATAATTTTCCAGCTCTGTGTCATACTTCTGCCGCTCTAC
ATCCAAATCAAGGTCGAAATCGATCAGCAGGAGGTTCATCCAGGTAAGGCCACATTTGAA
ACATCGTGGTCCTCATCATTCTCATAGACGTCTTCATCTGATGAACCTCGCTGATTCCAC
TGCTTGTAGACTTTTTCTACCCTTGATAGATGCTAAATTAAACAATCCACCATCAGCATA
ACCATCCTCCATGACATCAATTTTCATGCCTGTTGCTGCTCGAGCTTTAGCCTTTTCCCT
GCGTTTTGCAAGCCTTTTCTTCTCCTTCTTTGTCTTCGCCTGCATGAGTGTCTTCAGATC
TTCCATCTCATTTAAGATATCTTCATCATTCACTGACGTGTC
■■Homology search results ■■ -
sp_hit_id P08750
Definition sp|P08750|DACA_BACSU D-alanyl-D-alanine carboxypeptidase dacA OS=Bacillus subtilis
Align length 68
Score (bit) 30.8
E-value 2.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916094|Adiantum capillus-veneris mRNA, clone:
YMU001_000083_A08.
         (402 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P08750|DACA_BACSU D-alanyl-D-alanine carboxypeptidase dacA OS...    31   2.2  

>sp|P08750|DACA_BACSU D-alanyl-D-alanine carboxypeptidase dacA
           OS=Bacillus subtilis GN=dacA PE=1 SV=3
          Length = 443

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 20/68 (29%), Positives = 35/68 (51%)
 Frame = -2

Query: 308 QNAGKRLKLEQQQA*KLMSWRMVMLMVDCLI*HLSRVEKVYKQWNQRGSSDEDVYENDED 129
           +NA KRL +            M  +M + L+  L  +++   +W+Q  + D+ VYE  +D
Sbjct: 57  KNADKRLPIAS----------MTKMMTEYLL--LEAIDQGKVKWDQTYTPDDYVYEISQD 104

Query: 128 HDVSNVAL 105
           + +SNV L
Sbjct: 105 NSLSNVPL 112
tr_hit_id Q1EPL1
Definition tr|Q1EPL1|Q1EPL1_MUSAC FtsJ-like methyltransferase family protein OS=Musa acuminata
Align length 135
Score (bit) 55.5
E-value 1.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916094|Adiantum capillus-veneris mRNA, clone:
YMU001_000083_A08.
         (402 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q1EPL1|Q1EPL1_MUSAC FtsJ-like methyltransferase family protei...    55   1e-06
tr|A9RQI9|A9RQI9_PHYPA Predicted protein OS=Physcomitrella paten...    50   4e-05
tr|A7P8Y6|A7P8Y6_VITVI Chromosome chr3 scaffold_8, whole genome ...    50   4e-05
tr|Q688W3|Q688W3_ORYSJ Putative uncharacterized protein OJ1781_H...    49   1e-04
tr|Q0DFV9|Q0DFV9_ORYSJ Os05g0567400 protein OS=Oryza sativa subs...    49   1e-04
tr|B8AWS5|B8AWS5_ORYSI Putative uncharacterized protein OS=Oryza...    48   3e-04
tr|A3B6X0|A3B6X0_ORYSJ Putative uncharacterized protein OS=Oryza...    48   3e-04
tr|Q9SW10|Q9SW10_ARATH Putative uncharacterized protein AT4g2573...    46   8e-04
tr|Q8VZJ4|Q8VZJ4_ARATH AT4g25730/F14M19_10 OS=Arabidopsis thalia...    46   8e-04

>tr|Q1EPL1|Q1EPL1_MUSAC FtsJ-like methyltransferase family protein
           OS=Musa acuminata GN=MA4_25J11.4 PE=4 SV=1
          Length = 847

 Score = 55.5 bits (132), Expect = 1e-06
 Identities = 44/135 (32%), Positives = 60/135 (44%), Gaps = 1/135 (0%)
 Frame = -1

Query: 402 DTSVNDED-ILNEMEDLKTLMQXXXXXXXXXXXXXXXXXXXXXXTGMKIDVMEDGYADGG 226
           DT  ND+D +LNEME+L  L+                        GM+ID  ED Y D  
Sbjct: 347 DTKGNDDDSLLNEMEELAHLLDRKKKKAKKLLSKRRAKEKARRAMGMQIDATEDSYFDRD 406

Query: 225 LFNLASIKGRKSLQAVESARFIR*RRL*E**GPRCFKCGLTWMNXXXXXXXXXXDVERQK 46
           LF+L++IKG+K L A++SA         +           T M           D E+++
Sbjct: 407 LFSLSAIKGKKELSAIDSAELDDEYSKGD--AADSEDETQTAMLHDDSSSEMDSDEEQKR 464

Query: 45  YDTELENYLDRAYAR 1
           YD +LE  LD AY R
Sbjct: 465 YDAQLEEMLDEAYER 479


>tr|A9RQI9|A9RQI9_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_105018 PE=4 SV=1
          Length = 844

 Score = 50.4 bits (119), Expect = 4e-05
 Identities = 40/134 (29%), Positives = 58/134 (43%)
 Frame = -1

Query: 402 DTSVNDEDILNEMEDLKTLMQXXXXXXXXXXXXXXXXXXXXXXTGMKIDVMEDGYADGGL 223
           D   +DE+ L  ME+LK  ++                      TGM+IDVMEDG AD  L
Sbjct: 346 DEDNDDEEELATMEELKEYVESQKRKERKKKAKAKEKAKARSATGMQIDVMEDGVADTEL 405

Query: 222 FNLASIKGRKSLQAVESARFIR*RRL*E**GPRCFKCGLTWMNXXXXXXXXXXDVERQKY 43
           FN+ +IKG+K L  +E           E       +                 + +RQ+Y
Sbjct: 406 FNIKAIKGKKDLARMEVEDD-------EDDNDSVDEMLNDGPQQAEDDSDFDPEQDRQRY 458

Query: 42  DTELENYLDRAYAR 1
           D EL+ Y +RAY++
Sbjct: 459 DQELDQYFERAYSK 472


>tr|A7P8Y6|A7P8Y6_VITVI Chromosome chr3 scaffold_8, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00036355001
           PE=4 SV=1
          Length = 842

 Score = 50.4 bits (119), Expect = 4e-05
 Identities = 28/75 (37%), Positives = 39/75 (52%)
 Frame = -1

Query: 387 DEDILNEMEDLKTLMQXXXXXXXXXXXXXXXXXXXXXXTGMKIDVMEDGYADGGLFNLAS 208
           DE +LNEME+L   M+                      TGM++D +E+GY D  LF+L+S
Sbjct: 346 DERMLNEMEELTYAMERKKKRTKKLLAKRQAKDKARKVTGMQVDALEEGYTDHELFSLSS 405

Query: 207 IKGRKSLQAVESARF 163
           IK +K L AV S  +
Sbjct: 406 IKAKKDLLAVNSTEY 420


>tr|Q688W3|Q688W3_ORYSJ Putative uncharacterized protein
           OJ1781_H11.14 OS=Oryza sativa subsp. japonica
           GN=OJ1781_H11.14 PE=4 SV=1
          Length = 749

 Score = 49.3 bits (116), Expect = 1e-04
 Identities = 38/130 (29%), Positives = 55/130 (42%)
 Frame = -1

Query: 390 NDEDILNEMEDLKTLMQXXXXXXXXXXXXXXXXXXXXXXTGMKIDVMEDGYADGGLFNLA 211
           +D+ +L EME+L +++                       TGM+ID   D Y D  LF+++
Sbjct: 346 DDDQLLQEMEELTSVIDRKKKREKKRQSKRRAKDKARKATGMQIDATGDNYGDPDLFSIS 405

Query: 210 SIKGRKSLQAVESARFIR*RRL*E**GPRCFKCGLTWMNXXXXXXXXXXDVERQKYDTEL 31
           +IKG K LQA+ESA              +                    D E+Q+YD +L
Sbjct: 406 AIKGGKELQAIESAEL-------NVEDAQGDSENEDIQTREYSDEEMDSDEEQQRYDAQL 458

Query: 30  ENYLDRAYAR 1
           E  LD AY R
Sbjct: 459 EEMLDEAYER 468


>tr|Q0DFV9|Q0DFV9_ORYSJ Os05g0567400 protein OS=Oryza sativa subsp.
           japonica GN=Os05g0567400 PE=4 SV=1
          Length = 819

 Score = 49.3 bits (116), Expect = 1e-04
 Identities = 38/130 (29%), Positives = 55/130 (42%)
 Frame = -1

Query: 390 NDEDILNEMEDLKTLMQXXXXXXXXXXXXXXXXXXXXXXTGMKIDVMEDGYADGGLFNLA 211
           +D+ +L EME+L +++                       TGM+ID   D Y D  LF+++
Sbjct: 346 DDDQLLQEMEELTSVIDRKKKREKKRQSKRRAKDKARKATGMQIDATGDNYGDPDLFSIS 405

Query: 210 SIKGRKSLQAVESARFIR*RRL*E**GPRCFKCGLTWMNXXXXXXXXXXDVERQKYDTEL 31
           +IKG K LQA+ESA              +                    D E+Q+YD +L
Sbjct: 406 AIKGGKELQAIESAEL-------NVEDAQGDSENEDIQTREYSDEEMDSDEEQQRYDAQL 458

Query: 30  ENYLDRAYAR 1
           E  LD AY R
Sbjct: 459 EEMLDEAYER 468


>tr|B8AWS5|B8AWS5_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_21019 PE=4 SV=1
          Length = 868

 Score = 47.8 bits (112), Expect = 3e-04
 Identities = 26/74 (35%), Positives = 39/74 (52%)
 Frame = -1

Query: 390 NDEDILNEMEDLKTLMQXXXXXXXXXXXXXXXXXXXXXXTGMKIDVMEDGYADGGLFNLA 211
           +D+ +L EME+L +++                       TGM+ID   D Y D  LF+++
Sbjct: 294 DDDQLLQEMEELTSVIDRKKKREKKRQSKRRAKDKARKATGMQIDATGDNYGDPDLFSIS 353

Query: 210 SIKGRKSLQAVESA 169
           +IKG K LQA+ESA
Sbjct: 354 AIKGGKELQAIESA 367


>tr|A3B6X0|A3B6X0_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_018792 PE=4 SV=1
          Length = 738

 Score = 47.8 bits (112), Expect = 3e-04
 Identities = 26/74 (35%), Positives = 39/74 (52%)
 Frame = -1

Query: 390 NDEDILNEMEDLKTLMQXXXXXXXXXXXXXXXXXXXXXXTGMKIDVMEDGYADGGLFNLA 211
           +D+ +L EME+L +++                       TGM+ID   D Y D  LF+++
Sbjct: 240 DDDQLLQEMEELTSVIDRKKKREKKRQSKRRAKDKARKATGMQIDATGDNYGDPDLFSIS 299

Query: 210 SIKGRKSLQAVESA 169
           +IKG K LQA+ESA
Sbjct: 300 AIKGGKELQAIESA 313


>tr|Q9SW10|Q9SW10_ARATH Putative uncharacterized protein AT4g25730
           OS=Arabidopsis thaliana GN=AT4g25730 PE=2 SV=1
          Length = 821

 Score = 46.2 bits (108), Expect = 8e-04
 Identities = 25/77 (32%), Positives = 39/77 (50%)
 Frame = -1

Query: 402 DTSVNDEDILNEMEDLKTLMQXXXXXXXXXXXXXXXXXXXXXXTGMKIDVMEDGYADGGL 223
           D    D+ +LNE+E+L   +                       TG ++DV+EDG+ D  L
Sbjct: 343 DEENEDDKLLNELEELTNTVDRKKKQAKKILAKRRAKDKARKATGPQMDVLEDGFVDNEL 402

Query: 222 FNLASIKGRKSLQAVES 172
           F+L +IKG+K L AV++
Sbjct: 403 FSLNAIKGKKDLMAVDN 419


>tr|Q8VZJ4|Q8VZJ4_ARATH AT4g25730/F14M19_10 OS=Arabidopsis thaliana
           PE=2 SV=1
          Length = 821

 Score = 46.2 bits (108), Expect = 8e-04
 Identities = 25/77 (32%), Positives = 39/77 (50%)
 Frame = -1

Query: 402 DTSVNDEDILNEMEDLKTLMQXXXXXXXXXXXXXXXXXXXXXXTGMKIDVMEDGYADGGL 223
           D    D+ +LNE+E+L   +                       TG ++DV+EDG+ D  L
Sbjct: 343 DEENEDDKLLNELEELTNTVDRKKKQAKKILAKRRAKDKARKATGPQMDVLEDGFVDNEL 402

Query: 222 FNLASIKGRKSLQAVES 172
           F+L +IKG+K L AV++
Sbjct: 403 FSLNAIKGKKDLMAVDN 419