| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916100|Adiantum capillus-veneris mRNA, clone:
YMU001_000083_B04.
(427 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|O49347|PSBY_ARATH Photosystem II core complex proteins psbY, ... 93 5e-19
sp|P80470|PSBY_SPIOL Photosystem II core complex proteins psbY, ... 87 4e-17
sp|A2BXA4|PSBY_PROM5 Photosystem II protein Y OS=Prochlorococcus... 34 0.22
sp|P59907|PSBY_PROMP Photosystem II protein Y OS=Prochlorococcus... 34 0.28
sp|Q31AA8|PSBY_PROM9 Photosystem II protein Y OS=Prochlorococcus... 34 0.28
sp|A2BRU6|PSBY_PROMS Photosystem II protein Y OS=Prochlorococcus... 33 0.37
sp|A8G5I7|PSBY_PROM2 Photosystem II protein Y OS=Prochlorococcus... 33 0.48
sp|P49543|PSBY_ODOSI Photosystem II protein Y OS=Odontella sinen... 33 0.48
sp|Q5SNN4|C3H40_ORYSJ Zinc finger CCCH domain-containing protein... 33 0.61
sp|A0T0G0|PSBY_PHATR Photosystem II protein Y OS=Phaeodactylum t... 33 0.63
sp|P47775|GPR12_HUMAN Probable G-protein coupled receptor 12 OS=... 32 1.1
sp|Q9Z200|SH2B2_RAT SH2B adapter protein 2 OS=Rattus norvegicus ... 32 1.4
sp|A0T0V3|PSBY_THAPS Photosystem II protein Y OS=Thalassiosira p... 32 1.4
sp|Q6Z358|C3H49_ORYSJ Zinc finger CCCH domain-containing protein... 31 1.8
sp|Q7VQX7|SYR_BLOFL Arginyl-tRNA synthetase OS=Blochmannia flori... 31 2.4
sp|Q4IL82|INO80_GIBZE Putative DNA helicase INO80 OS=Gibberella ... 30 3.0
sp|Q04359|SPO20_YEAST Sporulation-specific protein 20 OS=Sacchar... 30 3.1
sp|Q9KCE0|SLEB_BACHD Spore cortex-lytic enzyme OS=Bacillus halod... 30 3.1
sp|Q8TF17|S3TC2_HUMAN SH3 domain and tetratricopeptide repeats-c... 30 3.1
sp|Q82TZ6|RS2_NITEU 30S ribosomal protein S2 OS=Nitrosomonas eur... 30 3.1
sp|Q7VD03|PSBY_PROMA Photosystem II protein Y OS=Prochlorococcus... 30 3.1
sp|Q4G385|PSBY_EMIHU Photosystem II protein Y OS=Emiliania huxle... 30 3.1
sp|A7HX96|PLSX_PARL1 Fatty acid/phospholipid synthesis protein p... 30 3.1
sp|Q8N7X1|CX055_HUMAN Putative uncharacterized protein CXorf55 O... 30 3.1
sp|Q12774|ARHG5_HUMAN Rho guanine nucleotide exchange factor 5 O... 30 3.1
sp|Q6NZY7|BORG3_HUMAN Cdc42 effector protein 5 OS=Homo sapiens G... 30 4.1
sp|Q14112|NID2_HUMAN Nidogen-2 OS=Homo sapiens GN=NID2 PE=1 SV=2 26 5.2
sp|Q3U2P1|SC24A_MOUSE Protein transport protein Sec24A OS=Mus mu... 27 5.3
sp|P59908|PSBY_SYNPX Photosystem II protein Y OS=Synechococcus s... 30 5.3
sp|Q28389|PAG_HORSE Pregnancy-associated glycoprotein OS=Equus c... 30 5.3
>sp|O49347|PSBY_ARATH Photosystem II core complex proteins psbY,
chloroplastic OS=Arabidopsis thaliana GN=PSBY PE=2 SV=1
Length = 189
Score = 92.8 bits (229), Expect = 5e-19
Identities = 54/108 (50%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
Frame = +2
Query: 110 VQEMGSLADSMKGATVDSDARGLVLVASLVPALGWVLFNILQPAINQLDRMKTSKGIVVS 289
+Q++ LA A SD RGL L+ +VPA+ WVL+NILQPAINQ+++M+ SKGIVV
Sbjct: 67 IQQIAQLA----AANASSDNRGLALLLPIVPAIAWVLYNILQPAINQVNKMRESKGIVVG 122
Query: 290 LGLGA--AASGVFPGRSDAIQEMSSIAAADNDSRGILLLGVLIPAIGW 427
LG+G AASG+ +A + AAA +DSRG LLL V+ PA+ W
Sbjct: 123 LGIGGGLAASGLLTPPPEA-YAAAEAAAASSDSRGQLLLIVVTPALLW 169
Score = 50.1 bits (118), Expect = 4e-06
Identities = 21/42 (50%), Positives = 33/42 (78%)
Frame = +2
Query: 143 KGATVDSDARGLVLVASLVPALGWVLFNILQPAINQLDRMKT 268
+ A SD+RG +L+ + PAL WVL+NILQPA+NQ+++M++
Sbjct: 146 EAAAASSDSRGQLLLIVVTPALLWVLYNILQPALNQINKMRS 187
>sp|P80470|PSBY_SPIOL Photosystem II core complex proteins psbY,
chloroplastic OS=Spinacia oleracea GN=PSBY PE=1 SV=2
Length = 199
Score = 86.7 bits (213), Expect = 4e-17
Identities = 48/91 (52%), Positives = 63/91 (69%), Gaps = 2/91 (2%)
Frame = +2
Query: 161 SDARGLVLVASLVPALGWVLFNILQPAINQLDRMKT-SKGIVVSLGL-GAAASGVFPGRS 334
SD RGL L+ ++PALGWVLFNILQPA+NQ+++M+ K +V LGL G A SG+
Sbjct: 91 SDNRGLALLLPIIPALGWVLFNILQPALNQINKMRNEKKAFIVGLGLSGLATSGLLLATP 150
Query: 335 DAIQEMSSIAAADNDSRGILLLGVLIPAIGW 427
+A Q S A +D+RG LLL V++PAIGW
Sbjct: 151 EA-QAASEEIARGSDNRGTLLLLVVLPAIGW 180
Score = 53.1 bits (126), Expect = 4e-07
Identities = 31/89 (34%), Positives = 48/89 (53%)
Frame = +2
Query: 2 PALNQLDRMKSVKXXXXXXXXXXXXXXXXXXXXXXXVQEMGSLADSMKGATVDSDARGLV 181
PALNQ+++M++ K Q + +G SD RG +
Sbjct: 116 PALNQINKMRNEKKAFIVGLGLSGLATSGLLLATPEAQAASE--EIARG----SDNRGTL 169
Query: 182 LVASLVPALGWVLFNILQPAINQLDRMKT 268
L+ ++PA+GWVLFNILQPA+NQL++M++
Sbjct: 170 LLLVVLPAIGWVLFNILQPALNQLNKMRS 198
Score = 33.5 bits (75), Expect = 0.37
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Frame = +2
Query: 251 LDRMKTSKGIVVSLGLGAAASGVFP--GRSD---AIQEMSSIAA--ADNDSRGILLLGVL 409
L K G+ + A A VF G D A+Q+++ IAA +D+RG+ LL +
Sbjct: 43 LSNSKLPMGLSPIITAPAIAGAVFATLGSVDPAFAVQQLADIAAEAGTSDNRGLALLLPI 102
Query: 410 IPAIGW 427
IPA+GW
Sbjct: 103 IPALGW 108
>sp|A2BXA4|PSBY_PROM5 Photosystem II protein Y OS=Prochlorococcus
marinus (strain MIT 9515) GN=psbY PE=3 SV=1
Length = 39
Score = 34.3 bits (77), Expect = 0.22
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2
Query: 170 RGLVLVASLVPALGWVLFNILQPAINQLDR 259
R LV+ A ++ AL WV+FNI +PA Q +R
Sbjct: 3 RTLVVFAPIIAALAWVIFNIQKPAREQFNR 32
>sp|P59907|PSBY_PROMP Photosystem II protein Y OS=Prochlorococcus
marinus subsp. pastoris (strain CCMP1378 / MED4) GN=psbY
PE=3 SV=1
Length = 38
Score = 33.9 bits (76), Expect = 0.28
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 170 RGLVLVASLVPALGWVLFNILQPAINQLDR 259
R +V+ A ++ AL WV+FNI +PA Q +R
Sbjct: 3 RAIVVFAPIIAALAWVVFNIQKPAREQFNR 32
>sp|Q31AA8|PSBY_PROM9 Photosystem II protein Y OS=Prochlorococcus
marinus (strain MIT 9312) GN=psbY PE=3 SV=1
Length = 37
Score = 33.9 bits (76), Expect = 0.28
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 170 RGLVLVASLVPALGWVLFNILQPAINQLDR 259
R +V+ A ++ A+ WV+FNI +PA Q DR
Sbjct: 3 RAIVVFAPIIAAVAWVVFNIQKPAREQWDR 32
>sp|A2BRU6|PSBY_PROMS Photosystem II protein Y OS=Prochlorococcus
marinus (strain AS9601) GN=psbY PE=3 SV=1
Length = 38
Score = 33.5 bits (75), Expect = 0.37
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 170 RGLVLVASLVPALGWVLFNILQPAINQLDR 259
R +V+ A ++ AL WV+FNI +PA Q +R
Sbjct: 3 RTIVVFAPIIAALAWVIFNIQKPAREQFNR 32
>sp|A8G5I7|PSBY_PROM2 Photosystem II protein Y OS=Prochlorococcus
marinus (strain MIT 9215) GN=psbY PE=3 SV=1
Length = 38
Score = 33.1 bits (74), Expect = 0.48
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 170 RGLVLVASLVPALGWVLFNILQPAINQLDR 259
R +V+ A ++ AL WV+FNI +PA Q +R
Sbjct: 3 RTIVVFAPIIAALAWVVFNIQKPAREQFNR 32
>sp|P49543|PSBY_ODOSI Photosystem II protein Y OS=Odontella sinensis
GN=psbY-A PE=3 SV=1
Length = 36
Score = 33.1 bits (74), Expect = 0.48
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +2
Query: 164 DARGLVLVASLVPALGWVLFNILQPAINQLDRM 262
D+R LV+ A L+ A W LFNI + AI Q+ R+
Sbjct: 2 DSRLLVIAAPLLVAASWALFNIGRLAIQQIQRL 34
>sp|Q5SNN4|C3H40_ORYSJ Zinc finger CCCH domain-containing protein 40
OS=Oryza sativa subsp. japonica GN=Os06g0170500 PE=2
SV=1
Length = 482
Score = 32.7 bits (73), Expect = 0.61
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 215 PTPMQAQEKPQAQDLGHHYPLSPPSYYRQEIPSLAPPH 102
P P QA + + G YP+ PP YY + P PP+
Sbjct: 389 PGPQQAAQAQASSSSGQSYPM-PPQYYHGQYPPYYPPY 425
>sp|A0T0G0|PSBY_PHATR Photosystem II protein Y OS=Phaeodactylum
tricornutum GN=psbY-A PE=3 SV=1
Length = 36
Score = 32.7 bits (73), Expect = 0.63
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 164 DARGLVLVASLVPALGWVLFNILQPAINQLDRMK 265
D R +V+ A ++ A W LFNI + AI Q+ R+K
Sbjct: 2 DTRLIVIAAPVLVAASWALFNIGRLAIQQIQRLK 35
|
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916100|Adiantum capillus-veneris mRNA, clone:
YMU001_000083_B04.
(427 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A9SPH7|A9SPH7_PHYPA PsbY photosystem II polypeptide OS=Physco... 102 7e-21
tr|B6SR26|B6SR26_MAIZE Photosystem II core complex proteins psbY... 101 2e-20
tr|A9U315|A9U315_PHYPA Predicted protein (Fragment) OS=Physcomit... 100 4e-20
tr|B6SQV2|B6SQV2_MAIZE Photosystem II core complex proteins psbY... 96 1e-18
tr|A9TFS8|A9TFS8_PHYPA Predicted protein (Fragment) OS=Physcomit... 95 2e-18
tr|A9PJP0|A9PJP0_POPJC Putative uncharacterized protein OS=Popul... 95 2e-18
tr|A9PJJ8|A9PJJ8_POPJC Putative uncharacterized protein OS=Popul... 94 3e-18
tr|A9PJ80|A9PJ80_POPJC Putative uncharacterized protein OS=Popul... 94 3e-18
tr|A9PIV1|A9PIV1_POPJC Putative uncharacterized protein OS=Popul... 94 3e-18
tr|A9PJP1|A9PJP1_POPJC Putative uncharacterized protein OS=Popul... 93 6e-18
tr|Q8LAL4|Q8LAL4_ARATH Putative uncharacterized protein OS=Arabi... 93 8e-18
tr|Q549N8|Q549N8_ARATH Putative uncharacterized protein OS=Arabi... 93 8e-18
tr|Q6ZJ41|Q6ZJ41_ORYSJ cDNA clone:001-024-H10, full insert seque... 92 1e-17
tr|Q0J8C7|Q0J8C7_ORYSJ Os08g0119800 protein (Fragment) OS=Oryza ... 92 1e-17
tr|A2YQQ7|A2YQQ7_ORYSI Putative uncharacterized protein OS=Oryza... 92 1e-17
tr|B7FLH1|B7FLH1_MEDTR Putative uncharacterized protein OS=Medic... 92 2e-17
tr|A9NZQ0|A9NZQ0_PICSI Putative uncharacterized protein OS=Picea... 91 2e-17
tr|A9NQA0|A9NQA0_PICSI Putative uncharacterized protein OS=Picea... 91 2e-17
tr|A9NL05|A9NL05_PICSI Putative uncharacterized protein OS=Picea... 91 2e-17
tr|B6SUJ7|B6SUJ7_MAIZE Photosystem II core complex proteins psbY... 91 3e-17
tr|A8JKA1|A8JKA1_CHLRE Ycf32-related polyprotein of photosystem ... 69 9e-11
tr|Q5K5A8|Q5K5A8_ORYSA PsbY-like protein OS=Oryza sativa GN=MgBP... 69 1e-10
tr|A8I003|A8I003_CHLRE Ycf32-related subunit of photosystem II O... 69 2e-10
tr|A4S5C8|A4S5C8_OSTLU Possible psbY, PSII-Y, photosystem II pol... 56 8e-07
tr|Q00Y99|Q00Y99_OSTTA Manganese-binding protein PsbY, photosyst... 55 2e-06
tr|A7P454|A7P454_VITVI Chromosome chr1 scaffold_5, whole genome ... 50 6e-05
tr|Q8TGW9|Q8TGW9_CANAL Putative transcriptional repressor OS=Can... 39 0.17
tr|Q5ADP3|Q5ADP3_CANAL Putative uncharacterized protein CYC8 OS=... 36 0.82
tr|A2QK29|A2QK29_ASPNC Similarity to human dynactin-1 OS=Aspergi... 36 1.1
tr|B6HJ36|B6HJ36_PENCH Pc21g19240 protein OS=Penicillium chrysog... 31 1.2
>tr|A9SPH7|A9SPH7_PHYPA PsbY photosystem II polypeptide
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_166016 PE=4 SV=1
Length = 368
Score = 102 bits (255), Expect = 7e-21
Identities = 58/151 (38%), Positives = 93/151 (61%), Gaps = 9/151 (5%)
Frame = +2
Query: 2 PALNQLDRMKSVKXXXXXXXXXXXXXXXXXXXXXXXVQEMGSLADSMKGATVDSDARGLV 181
PALNQ+D+MK+ K QE+ +ADS DARGL+
Sbjct: 117 PALNQVDKMKAAKSLVAGAGLGALALVAAPHADA--AQEIAQVADS--------DARGLI 166
Query: 182 LVASLVPALGWVLFNILQPAINQLDRMK---------TSKGIVVSLGLGAAASGVFPGRS 334
++ L+PA+GWVLFNIL+PA+NQ+++M+ +G++ +LGLG A+ + P +
Sbjct: 167 IIGLLLPAVGWVLFNILRPALNQIEKMQDQGNAAAITRKRGVIGALGLGTASLFLAP-HA 225
Query: 335 DAIQEMSSIAAADNDSRGILLLGVLIPAIGW 427
DA QE++++ AD+DSRG++++G+L+PA+GW
Sbjct: 226 DAAQEIATL--ADSDSRGLIIIGLLLPAVGW 254
Score = 98.2 bits (243), Expect = 2e-19
Identities = 48/101 (47%), Positives = 72/101 (71%)
Frame = +2
Query: 125 SLADSMKGATVDSDARGLVLVASLVPALGWVLFNILQPAINQLDRMKTSKGIVVSLGLGA 304
+LA A + D R + L+ LVPA+GWVLFNIL+PA+NQ+D+MK +K +V GLGA
Sbjct: 80 ALASQQIMALAEGDNRVVALLIPLVPAIGWVLFNILKPALNQVDKMKAAKSLVAGAGLGA 139
Query: 305 AASGVFPGRSDAIQEMSSIAAADNDSRGILLLGVLIPAIGW 427
A P +DA QE++ + AD+D+RG++++G+L+PA+GW
Sbjct: 140 LALVAAP-HADAAQEIAQV--ADSDARGLIIIGLLLPAVGW 177
Score = 76.3 bits (186), Expect = 7e-13
Identities = 46/120 (38%), Positives = 71/120 (59%), Gaps = 15/120 (12%)
Frame = +2
Query: 113 QEMGSLADSMKGATVDSDARGLVLVASLVPALGWVLFNILQPAINQLD------------ 256
QE+ +LADS D+RGL+++ L+PA+GWVLFNIL+PA+NQ++
Sbjct: 229 QEIATLADS--------DSRGLIIIGLLLPAVGWVLFNILKPALNQINNIVEGNDTGAPV 280
Query: 257 -RMKTSKGIVVSLGLGAAASGVF--PGRSDAIQEMSSIAAADNDSRGILLLGVLIPAIGW 427
R K G++ + G+ AAA + P +QE++ + A D+R ++LL +L PAIGW
Sbjct: 281 KRGKKFGGMIGATGISAAAMSLLAAPKADAQVQEIAQLGA---DTRPLILLFILAPAIGW 337
Score = 51.6 bits (122), Expect = 2e-05
Identities = 22/38 (57%), Positives = 31/38 (81%)
Frame = +2
Query: 149 ATVDSDARGLVLVASLVPALGWVLFNILQPAINQLDRM 262
A + +D R L+L+ L PA+GWVLFNIL+PA+NQ+D+M
Sbjct: 316 AQLGADTRPLILLFILAPAIGWVLFNILKPALNQVDKM 353
Score = 34.3 bits (77), Expect = 3.2
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Frame = +2
Query: 284 VSLGLGAAASGVFPGRSDAIQEMSS---IAAADNDSRGILLLGVLIPAIGW 427
+S+G A A +F + + ++S +A A+ D+R + LL L+PAIGW
Sbjct: 59 ISVGANALAGAMFAAMATSESALASQQIMALAEGDNRVVALLIPLVPAIGW 109
>tr|B6SR26|B6SR26_MAIZE Photosystem II core complex proteins psbY
OS=Zea mays PE=2 SV=1
Length = 176
Score = 101 bits (252), Expect = 2e-20
Identities = 54/106 (50%), Positives = 79/106 (74%), Gaps = 5/106 (4%)
Frame = +2
Query: 125 SLADSMKGATVDSDARGLVLVASLVPALGWVLFNILQPAINQLDRMKTSKGIVVSLGLGA 304
+LAD + A D+RG +L+ + PA+GWVL+NILQPA+NQL+RM++S+ + LGLGA
Sbjct: 52 ALADVVAAADAGGDSRGQLLLVVVAPAIGWVLYNILQPALNQLNRMRSSQAVAAGLGLGA 111
Query: 305 AASGV-FPGRSDA--IQEMSSIAAA--DNDSRGILLLGVLIPAIGW 427
AA+G+ P + A +Q++++IAAA +DSRG+LLL V+ PAIGW
Sbjct: 112 AAAGMAAPPEASAAVVQDLAAIAAAAPADDSRGLLLLIVVAPAIGW 157
Score = 60.8 bits (146), Expect = 3e-08
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Frame = +2
Query: 2 PALNQLDRMKSVKXXXXXXXXXXXXXXXXXXXXXXX--VQEMGSLADSMKGATVDSDARG 175
PALNQL+RM+S + VQ++ ++A A D+RG
Sbjct: 89 PALNQLNRMRSSQAVAAGLGLGAAAAGMAAPPEASAAVVQDLAAIA----AAAPADDSRG 144
Query: 176 LVLVASLVPALGWVLFNILQPAINQLDRMKT 268
L+L+ + PA+GWVLFNILQPA+NQL+RM++
Sbjct: 145 LLLLIVVAPAIGWVLFNILQPALNQLNRMRS 175
>tr|A9U315|A9U315_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_155209 PE=4 SV=1
Length = 137
Score = 100 bits (249), Expect = 4e-20
Identities = 48/101 (47%), Positives = 73/101 (72%)
Frame = +2
Query: 125 SLADSMKGATVDSDARGLVLVASLVPALGWVLFNILQPAINQLDRMKTSKGIVVSLGLGA 304
++A A + D R + L+ L+PA+GWVLFNILQPA+NQ+D+M+ +K +V GLGA
Sbjct: 21 AMASQQIMALAEGDNRVVALLIPLIPAIGWVLFNILQPALNQVDKMRGAKALVAGAGLGA 80
Query: 305 AASGVFPGRSDAIQEMSSIAAADNDSRGILLLGVLIPAIGW 427
AA+ + +DA QE + I AD+D+RG++++G+L+PAIGW
Sbjct: 81 AATLMAAPHADAAQEFAQI--ADSDARGLIIVGLLLPAIGW 119
Score = 63.2 bits (152), Expect = 6e-09
Identities = 35/88 (39%), Positives = 49/88 (55%)
Frame = +2
Query: 2 PALNQLDRMKSVKXXXXXXXXXXXXXXXXXXXXXXXVQEMGSLADSMKGATVDSDARGLV 181
PALNQ+D+M+ K QE +ADS DARGL+
Sbjct: 58 PALNQVDKMRGAKALVAGAGLGAAATLMAAPHADA-AQEFAQIADS--------DARGLI 108
Query: 182 LVASLVPALGWVLFNILQPAINQLDRMK 265
+V L+PA+GWVLFNIL+PA+NQ+++M+
Sbjct: 109 IVGLLLPAIGWVLFNILRPALNQIEKMQ 136
>tr|B6SQV2|B6SQV2_MAIZE Photosystem II core complex proteins psbY
OS=Zea mays PE=2 SV=1
Length = 191
Score = 95.5 bits (236), Expect = 1e-18
Identities = 52/107 (48%), Positives = 76/107 (71%), Gaps = 6/107 (5%)
Frame = +2
Query: 125 SLADSMKGATVDSDARGLVLVASLVPALGWVLFNILQPAINQLDRMKTSKGIVVSLGLGA 304
+LAD + A D+RG +L+ + PA+GWVL+NILQPA+NQL+RM++S+ + LGLGA
Sbjct: 67 ALAD-VAAADAGGDSRGQLLLVVVAPAIGWVLYNILQPALNQLNRMRSSQAVAAGLGLGA 125
Query: 305 AASGVFPGRSDA----IQEMSSIAAA--DNDSRGILLLGVLIPAIGW 427
AA+ +A +Q++++IAAA +DSRG+LLL V+ PAIGW
Sbjct: 126 AAAAGMAAPPEASAAVVQDLAAIAAAAPADDSRGLLLLIVVAPAIGW 172
Score = 62.0 bits (149), Expect = 1e-08
Identities = 36/89 (40%), Positives = 49/89 (55%)
Frame = +2
Query: 2 PALNQLDRMKSVKXXXXXXXXXXXXXXXXXXXXXXXVQEMGSLADSMKGATVDSDARGLV 181
PALNQL+RM+S + + LA A D D+RGL+
Sbjct: 103 PALNQLNRMRSSQAVAAGLGLGAAAAAGMAAPPEASAAVVQDLAAIAAAAPAD-DSRGLL 161
Query: 182 LVASLVPALGWVLFNILQPAINQLDRMKT 268
L+ + PA+GWVLFNILQPA+NQL+RM++
Sbjct: 162 LLIVVAPAIGWVLFNILQPALNQLNRMRS 190
Score = 34.3 bits (77), Expect = 3.2
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Frame = +2
Query: 263 KTSKGIVVSLGLGAAASGVFPGR--SDAIQEMSSIAAAD--NDSRGILLLGVLIPAIGW 427
+ +K +S+ + +G F S ++ +AAAD DSRG LLL V+ PAIGW
Sbjct: 37 QAAKKAALSVSASSTLAGAFLAALASSPDAALADVAAADAGGDSRGQLLLVVVAPAIGW 95
>tr|A9TFS8|A9TFS8_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_8237 PE=4 SV=1
Length = 130
Score = 95.1 bits (235), Expect = 2e-18
Identities = 46/101 (45%), Positives = 73/101 (72%)
Frame = +2
Query: 125 SLADSMKGATVDSDARGLVLVASLVPALGWVLFNILQPAINQLDRMKTSKGIVVSLGLGA 304
+LA A + D R + L+ LVPA+GWVLFNIL+PA+NQ+D+M+++K +V GLG+
Sbjct: 15 ALASQQIMALAEGDNRVVALLIPLVPAIGWVLFNILKPALNQVDKMRSAKALVAGAGLGS 74
Query: 305 AASGVFPGRSDAIQEMSSIAAADNDSRGILLLGVLIPAIGW 427
A P +DA QE++ + A++D+RG++++G+L+PAIGW
Sbjct: 75 LAMLAAP-HADAAQEIAQV--AESDARGLIIIGLLLPAIGW 112
Score = 62.0 bits (149), Expect = 1e-08
Identities = 34/88 (38%), Positives = 50/88 (56%)
Frame = +2
Query: 2 PALNQLDRMKSVKXXXXXXXXXXXXXXXXXXXXXXXVQEMGSLADSMKGATVDSDARGLV 181
PALNQ+D+M+S K QE+ +A+S DARGL+
Sbjct: 52 PALNQVDKMRSAKALVAGAGLGSLAMLAAPHADA--AQEIAQVAES--------DARGLI 101
Query: 182 LVASLVPALGWVLFNILQPAINQLDRMK 265
++ L+PA+GWVLFNIL+PA+NQ ++M+
Sbjct: 102 IIGLLLPAIGWVLFNILRPALNQFEKMQ 129
>tr|A9PJP0|A9PJP0_POPJC Putative uncharacterized protein OS=Populus
jackii PE=2 SV=1
Length = 192
Score = 94.7 bits (234), Expect = 2e-18
Identities = 47/91 (51%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
Frame = +2
Query: 158 DSDARGLVLVASLVPALGWVLFNILQPAINQLDRMKTSKGIVVSLGLGAAASGVFPGRSD 337
+ D RGL L+ L+PA+ WVLFNILQPA+NQ++RM+ ++G+++ LGLG A+ F D
Sbjct: 84 EGDNRGLALLLPLIPAIAWVLFNILQPALNQVNRMRETRGVIIGLGLGGLAASGFMSTPD 143
Query: 338 A-IQEMSSIAAADNDSRGILLLGVLIPAIGW 427
A E++ IA A +DSRG LLL V+ PAI W
Sbjct: 144 ASASEIARIAEATSDSRGTLLLLVVAPAILW 174
Score = 54.7 bits (130), Expect = 2e-06
Identities = 29/89 (32%), Positives = 48/89 (53%)
Frame = +2
Query: 2 PALNQLDRMKSVKXXXXXXXXXXXXXXXXXXXXXXXVQEMGSLADSMKGATVDSDARGLV 181
PALNQ++RM+ + E+ +A++ SD+RG +
Sbjct: 110 PALNQVNRMRETRGVIIGLGLGGLAASGFMSTPDASASEIARIAEAT------SDSRGTL 163
Query: 182 LVASLVPALGWVLFNILQPAINQLDRMKT 268
L+ + PA+ WVL+NILQPA+NQ++RM++
Sbjct: 164 LLLVVAPAILWVLYNILQPALNQINRMRS 192
>tr|A9PJJ8|A9PJJ8_POPJC Putative uncharacterized protein OS=Populus
jackii PE=2 SV=1
Length = 196
Score = 94.4 bits (233), Expect = 3e-18
Identities = 47/91 (51%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
Frame = +2
Query: 158 DSDARGLVLVASLVPALGWVLFNILQPAINQLDRMKTSKGIVVSLGLGAAASGVFPGRSD 337
+ D RG+ L+ L+PA+ WVLFNILQPA+NQ++RM+ +KG++V LGLG A+ F D
Sbjct: 87 EGDNRGIALLLPLIPAIAWVLFNILQPALNQINRMRQTKGVIVGLGLGGLAASGFISTPD 146
Query: 338 A-IQEMSSIAAADNDSRGILLLGVLIPAIGW 427
A E++ IA A +D+RG LLL V+ PAI W
Sbjct: 147 ASASEIAMIAEATSDNRGTLLLIVVAPAILW 177
Score = 53.9 bits (128), Expect = 4e-06
Identities = 29/89 (32%), Positives = 47/89 (52%)
Frame = +2
Query: 2 PALNQLDRMKSVKXXXXXXXXXXXXXXXXXXXXXXXVQEMGSLADSMKGATVDSDARGLV 181
PALNQ++RM+ K E+ +A++ SD RG +
Sbjct: 113 PALNQINRMRQTKGVIVGLGLGGLAASGFISTPDASASEIAMIAEAT------SDNRGTL 166
Query: 182 LVASLVPALGWVLFNILQPAINQLDRMKT 268
L+ + PA+ WVL+NILQPA+NQ+++M++
Sbjct: 167 LLIVVAPAILWVLYNILQPALNQINKMRS 195
>tr|A9PJ80|A9PJ80_POPJC Putative uncharacterized protein OS=Populus
jackii PE=2 SV=1
Length = 196
Score = 94.0 bits (232), Expect = 3e-18
Identities = 48/91 (52%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
Frame = +2
Query: 158 DSDARGLVLVASLVPALGWVLFNILQPAINQLDRMKTSKGIVVSLGLGA-AASGVFPGRS 334
+ D RGL L+ L+PA+ WVLFNILQPA+NQ++RM+ +KG++V LGLG AASG
Sbjct: 87 EGDNRGLALLLPLIPAIAWVLFNILQPALNQINRMRQTKGVIVGLGLGGLAASGFISTPH 146
Query: 335 DAIQEMSSIAAADNDSRGILLLGVLIPAIGW 427
+ E++ IA A +D+RG LLL V+ PAI W
Sbjct: 147 ASASEIAMIADATSDNRGTLLLIVVAPAILW 177
Score = 55.5 bits (132), Expect = 1e-06
Identities = 30/89 (33%), Positives = 47/89 (52%)
Frame = +2
Query: 2 PALNQLDRMKSVKXXXXXXXXXXXXXXXXXXXXXXXVQEMGSLADSMKGATVDSDARGLV 181
PALNQ++RM+ K E+ +AD+ SD RG +
Sbjct: 113 PALNQINRMRQTKGVIVGLGLGGLAASGFISTPHASASEIAMIADAT------SDNRGTL 166
Query: 182 LVASLVPALGWVLFNILQPAINQLDRMKT 268
L+ + PA+ WVL+NILQPA+NQ+++M++
Sbjct: 167 LLIVVAPAILWVLYNILQPALNQINKMRS 195
>tr|A9PIV1|A9PIV1_POPJC Putative uncharacterized protein OS=Populus
jackii PE=2 SV=1
Length = 196
Score = 94.0 bits (232), Expect = 3e-18
Identities = 47/91 (51%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
Frame = +2
Query: 158 DSDARGLVLVASLVPALGWVLFNILQPAINQLDRMKTSKGIVVSLGLGAAASGVFPGRSD 337
+ D RG+ L+ L+PA+ WVLFNILQPA+NQ++RM+ +KG++V LGLG A+ F D
Sbjct: 87 EGDNRGIALLLPLIPAIAWVLFNILQPALNQINRMRQTKGVIVGLGLGGLAASGFISTPD 146
Query: 338 A-IQEMSSIAAADNDSRGILLLGVLIPAIGW 427
A E++ IA A +D+RG LLL V+ PAI W
Sbjct: 147 ASASEIAMIAEAASDNRGTLLLIVVAPAILW 177
Score = 53.9 bits (128), Expect = 4e-06
Identities = 29/89 (32%), Positives = 47/89 (52%)
Frame = +2
Query: 2 PALNQLDRMKSVKXXXXXXXXXXXXXXXXXXXXXXXVQEMGSLADSMKGATVDSDARGLV 181
PALNQ++RM+ K E+ +A++ SD RG +
Sbjct: 113 PALNQINRMRQTKGVIVGLGLGGLAASGFISTPDASASEIAMIAEAA------SDNRGTL 166
Query: 182 LVASLVPALGWVLFNILQPAINQLDRMKT 268
L+ + PA+ WVL+NILQPA+NQ+++M++
Sbjct: 167 LLIVVAPAILWVLYNILQPALNQINKMRS 195
>tr|A9PJP1|A9PJP1_POPJC Putative uncharacterized protein OS=Populus
jackii PE=2 SV=1
Length = 192
Score = 93.2 bits (230), Expect = 6e-18
Identities = 46/91 (50%), Positives = 64/91 (70%), Gaps = 1/91 (1%)
Frame = +2
Query: 158 DSDARGLVLVASLVPALGWVLFNILQPAINQLDRMKTSKGIVVSLGLGAAASGVFPGRSD 337
+ D RGL L+ L+PA+ WVLFNILQP +NQ++RM+ ++G+++ LGLG A+ F D
Sbjct: 84 EGDNRGLALLLPLIPAIAWVLFNILQPTLNQVNRMRETRGVIIGLGLGGLAASGFMSTPD 143
Query: 338 A-IQEMSSIAAADNDSRGILLLGVLIPAIGW 427
A E++ IA A +DSRG LLL V+ PAI W
Sbjct: 144 ASASEIAMIAEATSDSRGTLLLLVVAPAILW 174
Score = 53.1 bits (126), Expect = 7e-06
Identities = 28/89 (31%), Positives = 47/89 (52%)
Frame = +2
Query: 2 PALNQLDRMKSVKXXXXXXXXXXXXXXXXXXXXXXXVQEMGSLADSMKGATVDSDARGLV 181
P LNQ++RM+ + E+ +A++ SD+RG +
Sbjct: 110 PTLNQVNRMRETRGVIIGLGLGGLAASGFMSTPDASASEIAMIAEAT------SDSRGTL 163
Query: 182 LVASLVPALGWVLFNILQPAINQLDRMKT 268
L+ + PA+ WVL+NILQPA+NQ++RM++
Sbjct: 164 LLLVVAPAILWVLYNILQPALNQINRMRS 192
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