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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916103
Clone id YMU001_000083_B07
Library
Length 375
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000083_B07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CACAATAAGTTACTATAAAACCAAACCCAAGTAGGCTCAAAAAGGTGGATTGTGGAGCTT
CCTAGTTGCTTGCGTTTTTGGAAGGTTGACACTCCCTCCTCCGAATCCTTGCGTTTTTGC
TCCTCGGCGTCATCCTTTCCATCTTCTGTGTTTCATACTGCTGGCTGCAATCAGCGATCT
CATTTCTCCCTCCATCCTCATGCCCTAGCGCTGCTATTCTGCAATGGTGCCCCCAACACC
ATTGCTGCAGTTTCAGCCAATAAATCATCTCAATTCAGCCCATCTCTCGGTTTCAGGAAG
AGGTGCTTTCCCTGCTGCAAATCAGCCTATCATTGTCGGTTTCTGTGGTGGTCAAACGGA
CTCGATTCATCCAGC
■■Homology search results ■■ -
sp_hit_id A8FT74
Definition sp|A8FT74|ENGA_SHESH GTP-binding protein engA OS=Shewanella sediminis (strain HAW-EB3)
Align length 76
Score (bit) 35.0
E-value 0.12
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916103|Adiantum capillus-veneris mRNA, clone:
YMU001_000083_B07.
         (375 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A8FT74|ENGA_SHESH GTP-binding protein engA OS=Shewanella sedi...    35   0.12 
sp|Q86SU0|ILDR1_HUMAN Immunoglobulin-like domain-containing rece...    32   0.75 
sp|Q00274|VP7_EHDV1 Core protein VP7 OS=Epizootic hemorrhagic di...    32   1.3  
sp|Q5N806|CYT4_ORYSJ Cysteine proteinase inhibitor 4 OS=Oryza sa...    31   1.7  
sp|Q2EY13|PRTGB_DANRE Protogenin B (Fragment) OS=Danio rerio GN=...    31   2.2  
sp|Q9SJQ6|ROS1_ARATH Protein ROS1 OS=Arabidopsis thaliana GN=ROS...    30   3.7  
sp|Q8N6T0|CK080_HUMAN Putative uncharacterized protein C11orf80 ...    30   3.7  
sp|Q2T9X5|CG061_BOVIN Uncharacterized protein C7orf61 homolog OS...    30   3.7  
sp|Q71H61|CA032_HUMAN Transmembrane and immunoglobulin domain-co...    30   3.7  
sp|Q2UGU3|SPT5_ASPOR Transcription elongation factor spt5 OS=Asp...    30   4.9  
sp|Q9ESK8|KCMB4_RAT Calcium-activated potassium channel subunit ...    30   4.9  
sp|Q9JIN6|KCMB4_MOUSE Calcium-activated potassium channel subuni...    30   4.9  
sp|Q5R8C7|ILDR1_PONAB Immunoglobulin-like domain-containing rece...    29   6.3  
sp|Q8CBR1|ILDR1_MOUSE Immunoglobulin-like domain-containing rece...    29   6.3  
sp|Q7SXV2|AEBP2_DANRE Zinc finger protein AEBP2 OS=Danio rerio G...    29   6.3  
sp|Q04885|OPA65_NEIGO Opacity protein opA65 (Fragment) OS=Neisse...    29   8.3  

>sp|A8FT74|ENGA_SHESH GTP-binding protein engA OS=Shewanella
           sediminis (strain HAW-EB3) GN=engA PE=3 SV=1
          Length = 488

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
 Frame = -2

Query: 284 DGLN*DDLLAETAAMVLGAPLQNSSARA*GWREK*DR*LQP---AV*NTEDGKDDAEEQK 114
           DG++ D   AE  A+ LG   Q ++A+  G     +  L P   A+    DG +D +E++
Sbjct: 121 DGIDADSACAEFWALGLGEVYQMAAAQGRGVTNMIEYALAPYAEALGLNRDGDEDEDEEE 180

Query: 113 RKDSEEGVSTFQKRKQ 66
           R+ SEE     QKR Q
Sbjct: 181 REYSEEEAEAEQKRLQ 196


>sp|Q86SU0|ILDR1_HUMAN Immunoglobulin-like domain-containing
           receptor 1 OS=Homo sapiens GN=ILDR1 PE=1 SV=2
          Length = 546

 Score = 32.3 bits (72), Expect = 0.75
 Identities = 14/45 (31%), Positives = 19/45 (42%)
 Frame = +3

Query: 114 FLLLGVILSIFCVSYCWLQSAISFLPPSSCPSAAILQWCPQHHCC 248
           F++LG +L +  +  CW Q       P  C        CP H CC
Sbjct: 173 FIILGALLLLLLIGVCWCQCC-----PQYCCCYIRCPCCPAHCCC 212


>sp|Q00274|VP7_EHDV1 Core protein VP7 OS=Epizootic hemorrhagic
           disease virus 1 GN=S7 PE=3 SV=1
          Length = 349

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = +2

Query: 41  KGGLWSFLVACVFGRLTLPPPNPCVFAPRRHPFHLLCFILLAAISDLIS 187
           K  LW  L A +  R TLP   P ++ P     ++L  ILL+A++D  S
Sbjct: 274 KNPLWHGLRAAILNRTTLPNNIPPIYPPHDRE-NVLLIILLSALADAFS 321


>sp|Q5N806|CYT4_ORYSJ Cysteine proteinase inhibitor 4 OS=Oryza
           sativa subsp. japonica GN=Os01g0915200 PE=2 SV=1
          Length = 158

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -3

Query: 205 GHEDGGRNEIADCSQQYETQKMERMTPRSKNARIRRREC 89
           G   GGR E+ D     E Q++ R +    N R R R+C
Sbjct: 47  GRRVGGRTEVRDVEGDREVQELGRFSVEEHNRRRRSRDC 85


>sp|Q2EY13|PRTGB_DANRE Protogenin B (Fragment) OS=Danio rerio
           GN=prtgb PE=2 SV=1
          Length = 1069

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 20/42 (47%), Positives = 25/42 (59%)
 Frame = +2

Query: 218 SAMVPPTPLLQFQPINHLNSAHLSVSGRGAFPAANQPIIVGF 343
           SA VPP P L+ +P+N       SVS R  FPAA+  +I GF
Sbjct: 603 SATVPPAPNLELEPLN-----CTSVSVRW-FPAASDVLIQGF 638


>sp|Q9SJQ6|ROS1_ARATH Protein ROS1 OS=Arabidopsis thaliana GN=ROS1
           PE=1 SV=2
          Length = 1393

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = -3

Query: 196 DGGRNEIADCSQQYETQKMERMTPRSKNARIRRRECQPSKNASN*E 59
           D G  E+ DC     +      TP+ K ++ +R+  QP KN SN E
Sbjct: 226 DSGNQELKDCLLSAPS------TPKRKRSQGKRKGVQPKKNGSNLE 265


>sp|Q8N6T0|CK080_HUMAN Putative uncharacterized protein C11orf80
           OS=Homo sapiens GN=C11orf80 PE=2 SV=1
          Length = 522

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 16/78 (20%)
 Frame = -3

Query: 229 HHC------------RIAALGHEDGGRNE----IADCSQQYETQKMERMTPRSKNARIRR 98
           HHC            + +A G ED   N     +AD S Q E ++++R +PR +  R  R
Sbjct: 393 HHCSCEVKQQLTLEKKDSAQGTEDAPDNSSLELLADTSGQAENKRLKRGSPRIEEMRALR 452

Query: 97  RECQPSKNASN*EAPQST 44
               PS + +    P++T
Sbjct: 453 SARAPSPSEAAPRRPEAT 470


>sp|Q2T9X5|CG061_BOVIN Uncharacterized protein C7orf61 homolog
           OS=Bos taurus PE=2 SV=1
          Length = 204

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 12/61 (19%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
 Frame = -3

Query: 259 WLKLQQWC--WGHHCRIAALGHEDGGRNEIADCSQQYETQKMERMTPRSKNARIRRRECQ 86
           W K+ +W   W H  +   + H D  +NE+    + ++  +  ++    K A++ + +  
Sbjct: 12  WQKISRWVFFWKHKAKSVIMDHTDSKKNEL-KAEKAFKVSETFKLVEPPKEAKVSKMDVS 70

Query: 85  P 83
           P
Sbjct: 71  P 71


>sp|Q71H61|CA032_HUMAN Transmembrane and immunoglobulin
           domain-containing protein C1orf32 OS=Homo sapiens
           GN=C1orf32 PE=2 SV=1
          Length = 639

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 16/47 (34%), Positives = 18/47 (38%)
 Frame = +3

Query: 108 LAFLLLGVILSIFCVSYCWLQSAISFLPPSSCPSAAILQWCPQHHCC 248
           +  +LLGV L    V  CW Q       P SC        CP   CC
Sbjct: 190 VGLVLLGVFLFFVLVGICWCQCC-----PHSCCCYVRCPCCPDSCCC 231


>sp|Q2UGU3|SPT5_ASPOR Transcription elongation factor spt5
           OS=Aspergillus oryzae GN=spt5 PE=3 SV=1
          Length = 1026

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -2

Query: 146 EDGKDDAEEQKRKDSEEGVSTFQKRKQLGSSTIHLFE 36
           ED  DD +E++  + EEG  +  K+++      H FE
Sbjct: 77  EDENDDDDEEEEDEDEEGAVSRPKKRRRKGGVAHFFE 113
tr_hit_id B3MQ40
Definition tr|B3MQ40|B3MQ40_DROAN GF20312 OS=Drosophila ananassae
Align length 59
Score (bit) 33.5
E-value 5.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916103|Adiantum capillus-veneris mRNA, clone:
YMU001_000083_B07.
         (375 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B3MQ40|B3MQ40_DROAN GF20312 OS=Drosophila ananassae GN=GF2031...    33   5.4  
tr|Q9W433|Q9W433_DROME Ca-alpha1T, isoform B OS=Drosophila melan...    33   7.0  
tr|Q963J2|Q963J2_DROME Voltage-dependent calcium channel alpha13...    33   7.0  
tr|Q4YC31|Q4YC31_PLABE Putative uncharacterized protein (Fragmen...    33   7.0  
tr|B4I0E8|B4I0E8_DROSE GM12593 OS=Drosophila sechellia GN=GM1259...    33   7.0  
tr|A8JUY8|A8JUY8_DROME Ca-alpha1T, isoform C OS=Drosophila melan...    33   7.0  
tr|B8CKR5|B8CKR5_9GAMM GTP-binding protein EngA OS=Shewanella pi...    33   9.2  
tr|Q2GTE6|Q2GTE6_CHAGB Putative uncharacterized protein OS=Chaet...    33   9.2  

>tr|B3MQ40|B3MQ40_DROAN GF20312 OS=Drosophila ananassae GN=GF20312
            PE=4 SV=1
          Length = 2715

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 13/59 (22%)
 Frame = +2

Query: 185  SPSILMP*RCYSA-------------MVPPTPLLQFQPINHLNSAHLSVSGRGAFPAAN 322
            SPS+L P   +S              ++PP+P+L  +P+N LN++ L V   G  P ++
Sbjct: 1204 SPSLLRPPNIFSGGQRSLDEGIPSIDLIPPSPVLAHKPLNILNASQLGVGVPGGGPGSS 1262


>tr|Q9W433|Q9W433_DROME Ca-alpha1T, isoform B OS=Drosophila
            melanogaster GN=Ca-alpha1T PE=2 SV=3
          Length = 3188

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 13/57 (22%)
 Frame = +2

Query: 185  SPSILMP*RCYSA-------------MVPPTPLLQFQPINHLNSAHLSVSGRGAFPA 316
            SPS+L P   ++              ++PP+P+L  +P+N LN++ L V   G  P+
Sbjct: 1684 SPSLLRPPNIFTGGQRSLDEGIPSIDLIPPSPVLSHKPLNILNASQLGVGMGGGVPS 1740


>tr|Q963J2|Q963J2_DROME Voltage-dependent calcium channel alpha13
           subunit (Fragment) OS=Drosophila melanogaster
           GN=Ca-alpha1T PE=2 SV=1
          Length = 656

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 13/57 (22%)
 Frame = +2

Query: 185 SPSILMP*RCYSA-------------MVPPTPLLQFQPINHLNSAHLSVSGRGAFPA 316
           SPS+L P   ++              ++PP+P+L  +P+N LN++ L V   G  P+
Sbjct: 225 SPSLLRPPNIFTGGQRSLDEGIPSIDLIPPSPVLSHKPLNILNASQLGVGMGGGVPS 281


>tr|Q4YC31|Q4YC31_PLABE Putative uncharacterized protein (Fragment)
           OS=Plasmodium berghei GN=PB000087.02.0 PE=4 SV=1
          Length = 138

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = -2

Query: 146 EDGKDDAEEQKRKDSEEGVSTFQKRKQLGSSTIHLFEPTW 27
           E+ + D  E+K K+ E+ VS+  K+ +L S+ IH+   +W
Sbjct: 99  ENEEKDDNEEKEKEKEDNVSSKAKKNRLHSNCIHILYISW 138


>tr|B4I0E8|B4I0E8_DROSE GM12593 OS=Drosophila sechellia GN=GM12593
            PE=4 SV=1
          Length = 2488

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 13/57 (22%)
 Frame = +2

Query: 185  SPSILMP*RCYSA-------------MVPPTPLLQFQPINHLNSAHLSVSGRGAFPA 316
            SPS+L P   ++              ++PP+P+L  +P+N LN++ L V   G  P+
Sbjct: 1285 SPSLLRPPNIFTGGQRSLDEGIPSIDLIPPSPVLSHKPLNILNASQLGVGMGGGVPS 1341


>tr|A8JUY8|A8JUY8_DROME Ca-alpha1T, isoform C OS=Drosophila
            melanogaster GN=Ca-alpha1T PE=4 SV=1
          Length = 3205

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 13/57 (22%)
 Frame = +2

Query: 185  SPSILMP*RCYSA-------------MVPPTPLLQFQPINHLNSAHLSVSGRGAFPA 316
            SPS+L P   ++              ++PP+P+L  +P+N LN++ L V   G  P+
Sbjct: 1701 SPSLLRPPNIFTGGQRSLDEGIPSIDLIPPSPVLSHKPLNILNASQLGVGMGGGVPS 1757


>tr|B8CKR5|B8CKR5_9GAMM GTP-binding protein EngA OS=Shewanella
           piezotolerans WP3 GN=swp_1455 PE=4 SV=1
          Length = 490

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
 Frame = -2

Query: 326 ADLQQGKHLFLKPR---------DGLN*DDLLAETAAMVLGAPLQNSSARA*GWREK*DR 174
           ADL   +HL  + +         DG++ D   AE  ++ LG   Q ++A+  G     + 
Sbjct: 98  ADLAIAQHLRSREKTTFVVANKVDGIDADSACAEFWSLGLGEVYQMAAAQGRGVTNMIEY 157

Query: 173 *LQP---AV*NTEDGKDDAEEQKRKDSEEGVSTFQKRKQ 66
            L P   A+  T+DG+ +  E++R+ +EE     QKR Q
Sbjct: 158 SLAPYAEAMGITKDGEGEESEEEREYTEEEAEAEQKRLQ 196


>tr|Q2GTE6|Q2GTE6_CHAGB Putative uncharacterized protein
           OS=Chaetomium globosum GN=CHGG_08758 PE=4 SV=1
          Length = 340

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +2

Query: 233 PTPLLQFQPINHLNSAHLSVSGRGAFPAANQPIIV 337
           PTPL +  P+ HLN+  L ++   + PA   P+++
Sbjct: 33  PTPLSRLSPLKHLNTTRLRITYHESGPATGPPVLL 67