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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916112
Clone id YMU001_000083_C08
Library
Length 508
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000083_C08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CCCAAGTGTTGAGGTGGTCATGAAGAGAAGGTCAATCTACCAGGTTCAACTAGCAACAAT
GAAGAAGAATATGACACACTACTTCATGGTTTAAAGATATGCATTGGCCAAGGTATACAA
CATCTCATGGTAAAAGGGGATGCACTTCTCATTGTGAAGCAAATTTTAGGCATTTGGGCA
TGCAAGAATGAGAACCTAAGGACAAAAGTTCATGCCATTCGTAGGCTGTTTAATCAGTTT
GAAGAAGTGCAACTATATCATATTCCTAGGAAACAAAATGAAGATGCCGATTTACTTGCA
CAAGAAGCAGTTACATGTGTTGAGAAAGAAGTGCAGGTCATCATGGTGGCAACTGCTGTG
AAGCAACCAAGATACCAGGGATTGGAGTCATTGACTCCCATTATTGGCTACATTTTGGAG
GGTGAGTTTACACAAGACTTCACAAAGGCTCAGAAGAGGAGACTCATAAAGAAGGCAAGC
GAGTATCTCTTCCTAGAAGGATACCTCT
■■Homology search results ■■ -
sp_hit_id P54162
Definition sp|P54162|RNHL_BACSU 14.7 kDa ribonuclease H-like protein OS=Bacillus subtilis
Align length 105
Score (bit) 53.5
E-value 6.0e-07
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916112|Adiantum capillus-veneris mRNA, clone:
YMU001_000083_C08.
         (508 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P54162|RNHL_BACSU 14.7 kDa ribonuclease H-like protein OS=Bac...    54   6e-07
sp|P64956|Y2253_MYCBO Uncharacterized protein Mb2253c OS=Mycobac...    50   8e-06
sp|P64955|Y2228_MYCTU Uncharacterized protein Rv2228c/MT2287 OS=...    50   8e-06
sp|P54164|YPEP_BACSU Uncharacterized protein ypeP OS=Bacillus su...    45   2e-04
sp|P36921|EBSB_ENTFA Cell wall enzyme ebsB OS=Enterococcus faeca...    42   0.002
sp|Q8K1N4|SPAS2_MOUSE Spermatogenesis-associated serine-rich pro...    33   1.0  
sp|Q86XZ4|SPAS2_HUMAN Spermatogenesis-associated serine-rich pro...    33   1.0  
sp|Q10749|VMMOC_NAJMO Zinc metalloproteinase mocarhagin-1 OS=Naj...    32   1.7  
sp|A7MSE1|PYRI_VIBHB Aspartate carbamoyltransferase regulatory c...    31   3.9  
sp|Q8IYM0|F186B_HUMAN Protein FAM186B OS=Homo sapiens GN=FAM186B...    31   3.9  
sp|Q5AYC8|BST1_EMENI GPI inositol-deacylase OS=Emericella nidula...    30   5.0  
sp|Q754Q7|RFT1_ASHGO Oligosaccharide translocation protein RFT1 ...    30   8.6  

>sp|P54162|RNHL_BACSU 14.7 kDa ribonuclease H-like protein
           OS=Bacillus subtilis GN=rnhA PE=1 SV=1
          Length = 132

 Score = 53.5 bits (127), Expect = 6e-07
 Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
 Frame = +1

Query: 16  GHEEKVNLP-GSTSNNEEEYDTLLHGLKICIGQGIQHLMVKGDALLIVKQILGIWACKNE 192
           G  E  ++P G  +N E E+  L+ G+K+C  +G Q +  + D+  IV++   +   KN 
Sbjct: 28  GKAESFSIPIGVHTNQEAEFLALIEGMKLCATRGYQSVSFRTDSD-IVERATELEMVKNI 86

Query: 193 NLRTKVHAIRRLFNQFEEVQLYHIPRKQNEDADLLAQEAVTCVEK 327
             +  V  I RL   F    +  IP KQN+ ADLLA+EA+   EK
Sbjct: 87  TFQPFVEEIIRLKAAFPLFFIKWIPGKQNQKADLLAKEAIRLNEK 131


>sp|P64956|Y2253_MYCBO Uncharacterized protein Mb2253c
           OS=Mycobacterium bovis GN=Mb2253c PE=4 SV=1
          Length = 364

 Score = 49.7 bits (117), Expect = 8e-06
 Identities = 29/90 (32%), Positives = 45/90 (50%)
 Frame = +1

Query: 43  GSTSNNEEEYDTLLHGLKICIGQGIQHLMVKGDALLIVKQILGIWACKNENLRTKVHAIR 222
           G  +NN  EY  L+ GL   +  G     V  D+ L+V+Q+ G W  K+ +L       +
Sbjct: 41  GRATNNVAEYRGLIAGLDDAVKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQ 100

Query: 223 RLFNQFEEVQLYHIPRKQNEDADLLAQEAV 312
            L +QF  +    +PR +N  AD LA +A+
Sbjct: 101 ALASQFRRINYEWVPRARNTYADRLANDAM 130


>sp|P64955|Y2228_MYCTU Uncharacterized protein Rv2228c/MT2287
           OS=Mycobacterium tuberculosis GN=Rv2228c PE=4 SV=1
          Length = 364

 Score = 49.7 bits (117), Expect = 8e-06
 Identities = 29/90 (32%), Positives = 45/90 (50%)
 Frame = +1

Query: 43  GSTSNNEEEYDTLLHGLKICIGQGIQHLMVKGDALLIVKQILGIWACKNENLRTKVHAIR 222
           G  +NN  EY  L+ GL   +  G     V  D+ L+V+Q+ G W  K+ +L       +
Sbjct: 41  GRATNNVAEYRGLIAGLDDAVKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQ 100

Query: 223 RLFNQFEEVQLYHIPRKQNEDADLLAQEAV 312
            L +QF  +    +PR +N  AD LA +A+
Sbjct: 101 ALASQFRRINYEWVPRARNTYADRLANDAM 130


>sp|P54164|YPEP_BACSU Uncharacterized protein ypeP OS=Bacillus
           subtilis GN=ypeP PE=4 SV=1
          Length = 120

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
 Frame = +1

Query: 52  SNNEEEYDTLLHGLKIC--IGQGIQHLMVKGDALLIVKQILGIWACKNENLRTKVHAIRR 225
           +NNE EY  L   ++    +G     + +KGD+L+++ Q+ G W C + +    +  I  
Sbjct: 11  TNNEAEYAALYEAIREVRELGASRNSITIKGDSLVVLNQLDGSWPCYDPSHNEWLDKIEA 70

Query: 226 LFNQFEEVQLYH-IPRKQNEDADLLAQEAVT 315
           L    +    Y  I RK N++AD LA++ ++
Sbjct: 71  LLESLKLTPTYETIQRKDNQEADGLAKKILS 101


>sp|P36921|EBSB_ENTFA Cell wall enzyme ebsB OS=Enterococcus faecalis
           GN=ebsB PE=3 SV=2
          Length = 135

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 28/99 (28%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
 Frame = +1

Query: 25  EKVNLP-GSTSNNEEEYDTLLHGLKICIGQ--GIQHLMVKGDALLIVKQILGIWACKNEN 195
           +++++P G  SN+E E+  L+  LK  I      Q +++  D+ ++V+ I   +A KNE 
Sbjct: 30  QQLHVPLGIVSNHEAEFKVLIEALKKAIANEDNQQTVLLHSDSKIVVQTIEKNYA-KNEK 88

Query: 196 LRTKVHAIRRLFNQFEEVQLYHIPRKQNEDADLLAQEAV 312
            +  +   ++L   F  + +  +P  QN+ AD+LA++A+
Sbjct: 89  YQPYLAEYQQLEKNFPLLLIEWLPESQNKAADMLARQAL 127


>sp|Q8K1N4|SPAS2_MOUSE Spermatogenesis-associated serine-rich
           protein 2 OS=Mus musculus GN=Spats2 PE=1 SV=1
          Length = 545

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = +1

Query: 190 ENLRTKVHAIRRLFNQFEEVQLYHIPRKQNEDADLLAQEAVTCVEKEVQVIMVATA 357
           EN++ K++A+R +           +P K N +  L+ Q    CV+K VQ  M  +A
Sbjct: 30  ENMKEKINAVRAI-----------VPNKSNNEIILVLQHFDNCVDKTVQAFMEGSA 74


>sp|Q86XZ4|SPAS2_HUMAN Spermatogenesis-associated serine-rich
           protein 2 OS=Homo sapiens GN=SPATS2 PE=1 SV=1
          Length = 545

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = +1

Query: 190 ENLRTKVHAIRRLFNQFEEVQLYHIPRKQNEDADLLAQEAVTCVEKEVQVIMVATA 357
           EN++ K++A+R +           +P K N +  L+ Q    CV+K VQ  M  +A
Sbjct: 30  ENMKEKINAVRAI-----------VPNKSNNEIILVLQHFDNCVDKTVQAFMEGSA 74


>sp|Q10749|VMMOC_NAJMO Zinc metalloproteinase mocarhagin-1 OS=Naja
           mossambica PE=1 SV=3
          Length = 609

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
 Frame = +1

Query: 166 LGIWACKNE-NLRTKVHAIRRLFNQFEEVQLYHIPRKQNEDADLL 297
           L IW+  NE N+++ V A   LF ++ E +L  +PRK+N++A LL
Sbjct: 255 LEIWSNGNEINVQSDVQATLDLFGEWRENKL--LPRKRNDNAQLL 297


>sp|A7MSE1|PYRI_VIBHB Aspartate carbamoyltransferase regulatory
           chain OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120)
           GN=pyrI PE=3 SV=1
          Length = 153

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 23/100 (23%), Positives = 44/100 (44%)
 Frame = +1

Query: 16  GHEEKVNLPGSTSNNEEEYDTLLHGLKICIGQGIQHLMVKGDALLIVKQILGIWACKNEN 195
           GH++ + +     N E+     L+     + Q   + +VK  AL + +++  ++ C N N
Sbjct: 54  GHKDLLKIENVFINEEQASKLALYAPHATVNQIENYEVVKKLALELPEKVNNVFECPNSN 113

Query: 196 LRTKVHAIRRLFNQFEEVQLYHIPRKQNEDADLLAQEAVT 315
             T    +   F  FE+ +   +  K  E   + A+E VT
Sbjct: 114 CITHNEPVASSFQVFEKKEEIRLKCKYCE--KVFAREIVT 151


>sp|Q8IYM0|F186B_HUMAN Protein FAM186B OS=Homo sapiens GN=FAM186B
           PE=2 SV=2
          Length = 893

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
 Frame = +1

Query: 208 VHAIRRLFNQFEEVQLYHI-PRKQNEDADLLAQEAVTCVEKEVQVIMVATAVKQPRYQGL 384
           ++ I R    + +   Y I PRK  E+A  L  E +   EK + + ++AT       +G+
Sbjct: 97  LYDILRWLGDWGDTLTYEIGPRKSEEEAAAL-DEWIEVTEKVLPLSLIATK------RGI 149

Query: 385 ESLTPIIGYILEGE 426
           ESLT +   ++EG+
Sbjct: 150 ESLTALCSTLIEGQ 163
tr_hit_id Q5W763
Definition tr|Q5W763|Q5W763_ORYSJ Putative polyprotein OS=Oryza sativa subsp. japonica
Align length 88
Score (bit) 82.8
E-value 9.0e-15
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916112|Adiantum capillus-veneris mRNA, clone:
YMU001_000083_C08.
         (508 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q5W763|Q5W763_ORYSJ Putative polyprotein OS=Oryza sativa subs...    83   9e-15
tr|Q01N27|Q01N27_ORYSA OSIGBa0124C14.4 protein OS=Oryza sativa G...    83   9e-15
tr|Q7XNV9|Q7XNV9_ORYSJ OSJNBb0015G09.7 protein OS=Oryza sativa s...    82   1e-14
tr|Q6F3C3|Q6F3C3_ORYSJ Putative gag-pol OS=Oryza sativa subsp. j...    82   1e-14
tr|Q10CD2|Q10CD2_ORYSJ Retrotransposon protein, putative, Ty3-gy...    82   1e-14
tr|Q84R50|Q84R50_ORYSJ Putative GAG-POL OS=Oryza sativa subsp. j...    82   2e-14
tr|Q2R8W1|Q2R8W1_ORYSJ Retrotransposon protein, putative, Ty3-gy...    82   2e-14
tr|Q2QU68|Q2QU68_ORYSJ Retrotransposon protein, putative, Ty3-gy...    82   2e-14
tr|Q10DA2|Q10DA2_ORYSJ Retrotransposon protein, putative, Ty3-gy...    82   2e-14
tr|Q8LMM4|Q8LMM4_ORYSJ Putative gag-pol OS=Oryza sativa subsp. j...    81   3e-14
tr|Q7XP29|Q7XP29_ORYSJ OSJNBa0027H09.10 protein (B1340F09.19 pro...    81   3e-14
tr|Q7G4T1|Q7G4T1_ORYSJ Retrotransposon protein, putative, Ty3-gy...    81   3e-14
tr|Q53JT1|Q53JT1_ORYSJ Retrotransposon protein, putative, Ty3-gy...    81   3e-14
tr|Q9SSW6|Q9SSW6_ORYSJ GAG-POL OS=Oryza sativa subsp. japonica G...    81   3e-14
tr|Q9AV68|Q9AV68_ORYSJ Putative gag-pol OS=Oryza sativa subsp. j...    81   3e-14
tr|Q8S609|Q8S609_ORYSJ Putative gag-pol OS=Oryza sativa subsp. j...    81   3e-14
tr|Q7XSU9|Q7XSU9_ORYSJ OSJNBa0039K24.7 protein OS=Oryza sativa s...    81   3e-14
tr|Q7XRZ3|Q7XRZ3_ORYSJ OSJNBb0015C06.3 protein OS=Oryza sativa s...    81   3e-14
tr|Q7XDK6|Q7XDK6_ORYSJ Retrotransposon protein, putative, Ty3-gy...    81   3e-14
tr|Q75K41|Q75K41_ORYSJ Putative gag-pol protein OS=Oryza sativa ...    81   3e-14
tr|Q5H9V9|Q5H9V9_ORYSA B1168G10.11 protein OS=Oryza sativa GN=B1...    81   3e-14
tr|Q10SF8|Q10SF8_ORYSJ Retrotransposon protein, putative, Ty3-gy...    81   3e-14
tr|Q10JS2|Q10JS2_ORYSJ Retrotransposon protein, putative, Ty3-gy...    81   3e-14
tr|Q108V1|Q108V1_ORYSJ Retrotransposon protein, putative, Ty3-gy...    81   3e-14
tr|Q7XRL7|Q7XRL7_ORYSJ OSJNBa0039G19.14 protein OS=Oryza sativa ...    80   4e-14
tr|Q2R8I2|Q2R8I2_ORYSJ Retrotransposon protein, putative, Ty3-gy...    80   4e-14
tr|Q7XL47|Q7XL47_ORYSJ OSJNBa0056L23.10 protein OS=Oryza sativa ...    80   6e-14
tr|Q75KQ1|Q75KQ1_ORYSJ Putative polyprotein (Retrotransposon pro...    80   6e-14
tr|Q2QLU5|Q2QLU5_ORYSJ Retrotransposon protein, putative, Ty3-gy...    80   6e-14
tr|Q8GTN3|Q8GTN3_ORYSJ Putative GAG-POL OS=Oryza sativa subsp. j...    80   7e-14

>tr|Q5W763|Q5W763_ORYSJ Putative polyprotein OS=Oryza sativa subsp.
            japonica GN=OJ1320_D10.11 PE=4 SV=1
          Length = 1551

 Score = 82.8 bits (203), Expect = 9e-15
 Identities = 39/88 (44%), Positives = 60/88 (68%)
 Frame = +1

Query: 46   STSNNEEEYDTLLHGLKICIGQGIQHLMVKGDALLIVKQILGIWACKNENLRTKVHAIRR 225
            S S+N  EY+ LLHGL+I I  GIQHL+V+GD+ L+V Q++  W+C ++N+ T    + +
Sbjct: 1200 SVSHNVAEYEALLHGLRIAISLGIQHLIVRGDSQLVVNQVMKEWSCLDDNMTTYRQEVCK 1259

Query: 226  LFNQFEEVQLYHIPRKQNEDADLLAQEA 309
            L ++F+ ++L H+ R  NE AD LA  A
Sbjct: 1260 LEDKFDGLELTHVLRHNNEAADKLANFA 1287


>tr|Q01N27|Q01N27_ORYSA OSIGBa0124C14.4 protein OS=Oryza sativa
            GN=OSIGBa0124C14.4 PE=4 SV=1
          Length = 1802

 Score = 82.8 bits (203), Expect = 9e-15
 Identities = 53/168 (31%), Positives = 90/168 (53%), Gaps = 14/168 (8%)
 Frame = +1

Query: 46   STSNNEEEYDTLLHGLKICIGQGIQHLMVKGDALLIVKQILGIWACKNENLRTKVHAIRR 225
            S S+N  EY+ LLHGL+I I  GI+HL+V+GD+ L+V Q++  W+C ++N+      +R+
Sbjct: 1264 SASHNVAEYEALLHGLRIAISLGIKHLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRK 1323

Query: 226  LFNQFEEVQLYHIPRKQNEDADLLA----QEAVTCVEKEVQVIMVATAVKQPRYQ--GLE 387
            L ++F+ ++L H+ R  NE AD LA    +  V   +  V+ +   T   +   Q  G  
Sbjct: 1324 LEDKFDGLELSHVLRHNNEAADRLANFGSKREVAPSDVFVEHLYTPTVPHKNITQAAGTH 1383

Query: 388  SLT--------PIIGYILEGEFTQDFTKAQKRRLIKKASEYLFLEGYL 507
             +T        P+I ++   E  QD  K +  R+ +++  Y+  E  L
Sbjct: 1384 DVTMVEADWREPLIRFLTSQELPQD--KDEAERISRRSKLYVLHEAKL 1429


>tr|Q7XNV9|Q7XNV9_ORYSJ OSJNBb0015G09.7 protein OS=Oryza sativa subsp.
            japonica GN=OSJNBb0015G09.7 PE=4 SV=2
          Length = 1991

 Score = 82.0 bits (201), Expect = 1e-14
 Identities = 37/85 (43%), Positives = 59/85 (69%)
 Frame = +1

Query: 46   STSNNEEEYDTLLHGLKICIGQGIQHLMVKGDALLIVKQILGIWACKNENLRTKVHAIRR 225
            S S+N  EY+ LLHGL+I I  GI+HL+V+GD+ L+V Q++  W+C ++N+      +R+
Sbjct: 1453 SASHNVAEYEALLHGLRIAISLGIKHLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRK 1512

Query: 226  LFNQFEEVQLYHIPRKQNEDADLLA 300
            L ++F+ ++L H+ R  NE AD LA
Sbjct: 1513 LEDKFDGLELSHVLRHNNEAADRLA 1537


>tr|Q6F3C3|Q6F3C3_ORYSJ Putative gag-pol OS=Oryza sativa subsp.
            japonica GN=OSJNBb0024J04.12 PE=4 SV=1
          Length = 1512

 Score = 82.0 bits (201), Expect = 1e-14
 Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 17/168 (10%)
 Frame = +1

Query: 46   STSNNEEEYDTLLHGLKICIGQGIQHLMVKGDALLIVKQILGIWACKNENLRTKVHAIRR 225
            S S+N  EY+ LLHGL+I I  GI+ L+V+GD+ L+V Q++  W+C ++N+      +R+
Sbjct: 1002 SASHNVAEYEALLHGLRIAISLGIRRLIVRGDSQLVVNQVMKEWSCLDDNMTAYRQEVRK 1061

Query: 226  LFNQFEEVQLYHIPRKQNEDADLLA-----QEAV------------TCVEKEVQVIMVAT 354
            L N+F+ ++L H+ R  NE AD LA     +EA             T   KE    M A 
Sbjct: 1062 LENKFDGLELTHVLRHNNEAADRLANFGSKREAAPSDVFVEHLYKPTVPRKETVEAMDAQ 1121

Query: 355  AVKQPRYQGLESLTPIIGYILEGEFTQDFTKAQKRRLIKKASEYLFLE 498
             V        E   P I ++ + E  QD  K +  R+ +++  Y+  E
Sbjct: 1122 GVSMIEADWRE---PFIKFLSKQELPQD--KNEAERISRRSRLYIIHE 1164


>tr|Q10CD2|Q10CD2_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
            subclass OS=Oryza sativa subsp. japonica
            GN=LOC_Os03g57370 PE=4 SV=1
          Length = 1552

 Score = 82.0 bits (201), Expect = 1e-14
 Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 17/168 (10%)
 Frame = +1

Query: 46   STSNNEEEYDTLLHGLKICIGQGIQHLMVKGDALLIVKQILGIWACKNENLRTKVHAIRR 225
            S S+N  EY+ LLHGL+I I  GI+ L+V+GD+ L+V Q++  W+C ++N+      +R+
Sbjct: 1042 SASHNVAEYEALLHGLRIAISLGIRRLIVRGDSQLVVNQVMKEWSCLDDNMTAYRQEVRK 1101

Query: 226  LFNQFEEVQLYHIPRKQNEDADLLA-----QEAV------------TCVEKEVQVIMVAT 354
            L N+F+ ++L H+ R  NE AD LA     +EA             T   KE    M A 
Sbjct: 1102 LENKFDGLELTHVLRHNNEAADRLANFGSKREAAPSDVFVEHLYKPTVPRKETVEAMDAQ 1161

Query: 355  AVKQPRYQGLESLTPIIGYILEGEFTQDFTKAQKRRLIKKASEYLFLE 498
             V        E   P I ++ + E  QD  K +  R+ +++  Y+  E
Sbjct: 1162 GVSMIEADWRE---PFIKFLSKQELPQD--KNEAERISRRSRLYIIHE 1204


>tr|Q84R50|Q84R50_ORYSJ Putative GAG-POL OS=Oryza sativa subsp.
           japonica GN=OSJNBb0016H12.4 PE=4 SV=1
          Length = 930

 Score = 81.6 bits (200), Expect = 2e-14
 Identities = 49/168 (29%), Positives = 89/168 (52%), Gaps = 14/168 (8%)
 Frame = +1

Query: 46  STSNNEEEYDTLLHGLKICIGQGIQHLMVKGDALLIVKQILGIWACKNENLRTKVHAIRR 225
           S S+N  EY+ LLHGL+I I  GI+ L+V+GD+ L+V Q++  W+C ++N+      +R+
Sbjct: 457 SASHNVAEYEALLHGLRIAISLGIRRLIVRGDSQLVVNQVMKEWSCLDDNMTAYRQEVRK 516

Query: 226 LFNQFEEVQLYHIPRKQNEDADLLA----QEAVTCVEKEVQVIMVATAVKQPRYQGLES- 390
           L N+F+ ++L H+ R  NE  D LA    +   T  +  V+ +   T  ++   + +++ 
Sbjct: 517 LENKFDGLELTHVLRHNNEADDRLANFGSKREATPSDVFVEHLYEPTVPRKETIEAMDTQ 576

Query: 391 ---------LTPIIGYILEGEFTQDFTKAQKRRLIKKASEYLFLEGYL 507
                      P I ++ + E  QD  K +  R+ +++  Y+  E  L
Sbjct: 577 GVSMIETDWREPFINFLTKQELPQD--KNEAERISRRSRLYIIHEAEL 622


>tr|Q2R8W1|Q2R8W1_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
            subclass OS=Oryza sativa subsp. japonica
            GN=LOC_Os11g10820 PE=4 SV=1
          Length = 1929

 Score = 81.6 bits (200), Expect = 2e-14
 Identities = 37/85 (43%), Positives = 59/85 (69%)
 Frame = +1

Query: 46   STSNNEEEYDTLLHGLKICIGQGIQHLMVKGDALLIVKQILGIWACKNENLRTKVHAIRR 225
            S S+N  EY+ LLHGL+I I  GI+ L+V+GD+ L+V Q++  W+C ++N+ T    +R+
Sbjct: 1422 SASHNVAEYEALLHGLRIAISLGIRRLIVRGDSQLVVNQVMKEWSCLDDNMTTYRQEVRK 1481

Query: 226  LFNQFEEVQLYHIPRKQNEDADLLA 300
            L N+F+ ++L H+ R  NE +D LA
Sbjct: 1482 LENKFDGLELTHVLRHNNEASDKLA 1506


>tr|Q2QU68|Q2QU68_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
            subclass OS=Oryza sativa subsp. japonica
            GN=LOC_Os12g17290 PE=4 SV=1
          Length = 2196

 Score = 81.6 bits (200), Expect = 2e-14
 Identities = 52/168 (30%), Positives = 90/168 (53%), Gaps = 14/168 (8%)
 Frame = +1

Query: 46   STSNNEEEYDTLLHGLKICIGQGIQHLMVKGDALLIVKQILGIWACKNENLRTKVHAIRR 225
            S S+N  EY+ LLHGL+I I  GI+ L+V+GD+ L+V Q++  W+C ++N+ T    +R+
Sbjct: 1658 SASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMTYRQEVRK 1717

Query: 226  LFNQFEEVQLYHIPRKQNEDADLLA----QEAVTCVEKEVQVIMVATAVKQPRYQ--GLE 387
            L ++F+ ++L H+ R  NE AD LA    +  V   +  V+ +   T   +   Q  G +
Sbjct: 1718 LEDKFDGLELSHVLRHNNEAADRLANFGSKREVAPSDVFVEHLYTPTVPHKDATQVAGTQ 1777

Query: 388  SLT--------PIIGYILEGEFTQDFTKAQKRRLIKKASEYLFLEGYL 507
             +         P+I ++   E  QD  K +  R+ +++  Y+  E  L
Sbjct: 1778 DVAMVEADWREPLIRFLTSQELPQD--KDEAERISRRSKLYVMHEAEL 1823


>tr|Q10DA2|Q10DA2_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
           subclass OS=Oryza sativa subsp. japonica
           GN=LOC_Os03g52540 PE=4 SV=1
          Length = 952

 Score = 81.6 bits (200), Expect = 2e-14
 Identities = 49/168 (29%), Positives = 89/168 (52%), Gaps = 14/168 (8%)
 Frame = +1

Query: 46  STSNNEEEYDTLLHGLKICIGQGIQHLMVKGDALLIVKQILGIWACKNENLRTKVHAIRR 225
           S S+N  EY+ LLHGL+I I  GI+ L+V+GD+ L+V Q++  W+C ++N+      +R+
Sbjct: 479 SASHNVAEYEALLHGLRIAISLGIRRLIVRGDSQLVVNQVMKEWSCLDDNMTAYRQEVRK 538

Query: 226 LFNQFEEVQLYHIPRKQNEDADLLA----QEAVTCVEKEVQVIMVATAVKQPRYQGLES- 390
           L N+F+ ++L H+ R  NE  D LA    +   T  +  V+ +   T  ++   + +++ 
Sbjct: 539 LENKFDGLELTHVLRHNNEADDRLANFGSKREATPSDVFVEHLYEPTVPRKETIEAMDTQ 598

Query: 391 ---------LTPIIGYILEGEFTQDFTKAQKRRLIKKASEYLFLEGYL 507
                      P I ++ + E  QD  K +  R+ +++  Y+  E  L
Sbjct: 599 GVSMIETDWREPFINFLTKQELPQD--KNEAERISRRSRLYIIHEAEL 644


>tr|Q8LMM4|Q8LMM4_ORYSJ Putative gag-pol OS=Oryza sativa subsp.
            japonica GN=OSJNBb0086I08.6 PE=4 SV=1
          Length = 2017

 Score = 81.3 bits (199), Expect = 3e-14
 Identities = 51/168 (30%), Positives = 90/168 (53%), Gaps = 14/168 (8%)
 Frame = +1

Query: 46   STSNNEEEYDTLLHGLKICIGQGIQHLMVKGDALLIVKQILGIWACKNENLRTKVHAIRR 225
            S S+N  EY+ LLHGL+I I  GI+ L+V+GD+ L+V Q++  W+C ++N++     +R+
Sbjct: 1479 SASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMKAYRQEVRK 1538

Query: 226  LFNQFEEVQLYHIPRKQNEDADLLA----QEAVTCVEKEVQVIMVATAVKQPRYQ--GLE 387
            L ++F+ ++L H+ R  NE AD LA    +  V   +  V+ +   T   +   Q  G+ 
Sbjct: 1539 LEDKFDGLELSHVLRHDNEAADRLANFGSKREVAPSDVFVEHLYTPTVPHKDTTQAAGIH 1598

Query: 388  SLT--------PIIGYILEGEFTQDFTKAQKRRLIKKASEYLFLEGYL 507
             +         P+I ++   E  QD  K +  R+ +++  Y+  E  L
Sbjct: 1599 DVAMVETDWREPLIRFLTSQELPQD--KDEAERISRRSKLYVMHEAEL 1644