BP916119 |
Clone id |
YMU001_000083_D03 |
Library |
YMU01 |
Length |
480 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000083_D03. |
Accession |
BP916119 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GTACGACTGCCGGGGAGTCACTTTGCAACTGTGCAACCATGCACTAATTTGCCAAGAGTG ACCCCACTCGTGAGGCTTATATTTAAAAAAATGTGGCCAAAAGAAATACATGCTAAAACC AGGGGTCCCCAAAGCTCCGAAACTCAAAAGCAATGTTCAAAAGTCAATGCTTTCAATAAT TAGCCGAAAAGCACTTGCTCGAATCTGCCATGTTAGCACCCGCGTTTTGTGGCCAATCAG CAGCAAGATTTGCAACACTTTTCTTGGGCGTCCATATAGCCTCACAACCTGCCGCTCTCT CCTCTATCTGGTCGGATTGGCTAGGTCATCACTTTGTGACATACCCCTCTTACGAGAAGA GTAATCGCCCTCGATTACGCTTGCAAAGTAGATAGAAAACAGGAAGTATGCCCAGTGACT TTATGTATACATGCAATCTGGCCACTCGAACCATGCACTAGCACAAAGAACATTGATCAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6NSN2 |
Definition |
sp|Q6NSN2|AOF_DANRE Amine oxidase [flavin-containing] OS=Danio rerio |
Align length |
29 |
Score (bit) |
35.8 |
E-value |
0.1 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8A5Q3 |
Definition |
tr|B8A5Q3|B8A5Q3_DANRE Monoamine oxidase OS=Danio rerio |
Align length |
29 |
Score (bit) |
35.8 |
E-value |
1.1 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916119|Adiantum capillus-veneris mRNA, clone: YMU001_000083_D03. (480 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8A5Q3|B8A5Q3_DANRE Monoamine oxidase OS=Danio rerio GN=moa P... 36 1.1 tr|B6ZHD2|B6ZHD2_CYPCA Monoamine oxidase OS=Cyprinus carpio GN=m... 36 1.1 tr|A2U5L2|A2U5L2_BACCO Putative uncharacterized protein OS=Bacil... 35 1.4 tr|Q5N741|Q5N741_ORYSJ Putative oligopeptide transporter OS=Oryz... 35 1.9 tr|A3A028|A3A028_ORYSJ Putative uncharacterized protein OS=Oryza... 35 1.9 tr|A7QR49|A7QR49_VITVI Cytosine-specific methyltransferase OS=Vi... 33 5.4 tr|Q4S9P2|Q4S9P2_TETNG Chromosome 2 SCAF14695, whole genome shot... 33 5.4 tr|Q47CN9|Q47CN9_DECAR Putative uncharacterized protein OS=Dechl... 33 7.0 tr|B3DK21|B3DK21_DANRE Zgc:194678 OS=Danio rerio GN=zgc:194678 P... 33 9.2 tr|Q0PGS2|Q0PGS2_POERE Monoamine oxidase (Fragment) OS=Poecilia ... 33 9.2 tr|Q99NA8|Q99NA8_CAVPO Putative monoamine oxidase A (Fragment) O... 33 9.2 tr|Q21HR7|Q21HR7_SACD2 TonB-dependent receptor OS=Saccharophagus... 33 9.2 tr|Q22U11|Q22U11_TETTH Cyclic nucleotide-binding domain containi... 33 9.2
>tr|B8A5Q3|B8A5Q3_DANRE Monoamine oxidase OS=Danio rerio GN=moa PE=4 SV=1 Length = 522
Score = 35.8 bits (81), Expect = 1.1 Identities = 14/29 (48%), Positives = 22/29 (75%) Frame = +3
Query: 234 QSAARFATLFLGVHIASQPAALSSIWSDW 320 +SA RFATLF+ V++ S+P +S++W W Sbjct: 160 RSARRFATLFVNVNVTSEPHEVSALWFLW 188
>tr|B6ZHD2|B6ZHD2_CYPCA Monoamine oxidase OS=Cyprinus carpio GN=mao PE=2 SV=1 Length = 526
Score = 35.8 bits (81), Expect = 1.1 Identities = 14/29 (48%), Positives = 22/29 (75%) Frame = +3
Query: 234 QSAARFATLFLGVHIASQPAALSSIWSDW 320 +SA RFATLF+ V++ S+P +S++W W Sbjct: 160 RSARRFATLFVNVNVTSEPHEVSALWFLW 188
>tr|A2U5L2|A2U5L2_BACCO Putative uncharacterized protein OS=Bacillus coagulans 36D1 GN=BcoaDRAFT_1228 PE=4 SV=1 Length = 225
Score = 35.4 bits (80), Expect = 1.4 Identities = 12/34 (35%), Positives = 23/34 (67%) Frame = +2
Query: 176 IISRKALARICHVSTRVLWPISSKICNTFLGRPY 277 ++++K L +ICH + + WP+++ TF+G PY Sbjct: 104 LVTKKELDKICHNARSMNWPVNTNDRRTFIGTPY 137
>tr|Q5N741|Q5N741_ORYSJ Putative oligopeptide transporter OS=Oryza sativa subsp. japonica GN=P0491F11.14 PE=4 SV=1 Length = 542
Score = 35.0 bits (79), Expect = 1.9 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 1/85 (1%) Frame = +2
Query: 212 VSTRVLWPI-SSKICNTFLGRPYSLTTCRSLLYLVGLARSSLCDIPLLREE*SPSITLAK 388 + T +L P+ S + +++LGR Y C SLLY++GL ++ + L EE S S LA Sbjct: 84 MGTSMLLPLLGSAVADSWLGR-YRTIVCASLLYILGLGMITVSSV-LAPEESSESSNLAA 141
Query: 389 *IENRKYAQ*LYVYMQSGHSNHALA 463 + ++ + + Q GH A A Sbjct: 142 HVAFFYFSLYVVAFAQGGHKPCAQA 166
>tr|A3A028|A3A028_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_004150 PE=4 SV=1 Length = 1282
Score = 35.0 bits (79), Expect = 1.9 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 1/85 (1%) Frame = +2
Query: 212 VSTRVLWPI-SSKICNTFLGRPYSLTTCRSLLYLVGLARSSLCDIPLLREE*SPSITLAK 388 + T +L P+ S + +++LGR Y C SLLY++GL ++ + L EE S S LA Sbjct: 654 MGTSMLLPLLGSAVADSWLGR-YRTIVCASLLYILGLGMITVSSV-LAPEESSESSNLAA 711
Query: 389 *IENRKYAQ*LYVYMQSGHSNHALA 463 + ++ + + Q GH A A Sbjct: 712 HVAFFYFSLYVVAFAQGGHKPCAQA 736
>tr|A7QR49|A7QR49_VITVI Cytosine-specific methyltransferase OS=Vitis vinifera GN=GSVIVT00003672001 PE=3 SV=1 Length = 997
Score = 33.5 bits (75), Expect = 5.4 Identities = 22/64 (34%), Positives = 31/64 (48%) Frame = -1
Query: 261 KVLQILLLIGHKTRVLTWQIRASAFRLIIESIDF*TLLLSFGALGTPGFSMYFFWPHFFK 82 K+LQIL+L R W S RLI I F ++L+ T FS +FF+ +F Sbjct: 194 KILQILILFFTHQRPKCWCCSVSVSRLISVLIGFYCVILT----TTEHFSFFFFFSNFVS 249
Query: 81 YKPH 70 + H Sbjct: 250 FTVH 253
>tr|Q4S9P2|Q4S9P2_TETNG Chromosome 2 SCAF14695, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00021795001 PE=4 SV=1 Length = 609
Score = 33.5 bits (75), Expect = 5.4 Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%) Frame = +3
Query: 228 CGQSAAR-FATLFLGVHIASQPAALSSIWSDW 320 C SA R FATLF+ V++ S+P +S++W W Sbjct: 236 CWTSAVRRFATLFVNVNVTSEPHEVSALWFLW 267
>tr|Q47CN9|Q47CN9_DECAR Putative uncharacterized protein OS=Dechloromonas aromatica (strain RCB) GN=Daro_2662 PE=3 SV=1 Length = 288
Score = 33.1 bits (74), Expect = 7.0 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = +3
Query: 255 TLFLGVHIASQPAALSSIWSD-WLGHHFVTYPSYEKSNRPRL 377 T+ LG++ A+ A S WSD W G HF P+ E+ P L Sbjct: 17 TVILGINSAAAQDAASRYWSDSWRGWHFYEAPAPEEIEHPLL 58
>tr|B3DK21|B3DK21_DANRE Zgc:194678 OS=Danio rerio GN=zgc:194678 PE=2 SV=1 Length = 260
Score = 32.7 bits (73), Expect = 9.2 Identities = 17/47 (36%), Positives = 24/47 (51%) Frame = -1
Query: 144 SFGALGTPGFSMYFFWPHFFKYKPHEWGHSWQISAWLHSCKVTPRQS 4 +F A+G FS+ W + + P E H QISA + KV PR + Sbjct: 47 AFRAVGVSPFSLEIQWWYLKEAAPKELAHELQISAPANRAKVAPRDA 93
>tr|Q0PGS2|Q0PGS2_POERE Monoamine oxidase (Fragment) OS=Poecilia reticulata PE=2 SV=1 Length = 214
Score = 32.7 bits (73), Expect = 9.2 Identities = 12/25 (48%), Positives = 19/25 (76%) Frame = +3
Query: 246 RFATLFLGVHIASQPAALSSIWSDW 320 RFATLF+ V++ S+P +S++W W Sbjct: 101 RFATLFVNVNVTSEPHEVSALWFLW 125
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