BP916122 |
Clone id |
YMU001_000083_D06 |
Library |
YMU01 |
Length |
527 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000083_D06. |
Accession |
BP916122 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GTCCTCAATGATAGTGAACTTTGTGTCATCGTCAGGGGAGACGACTAAAATAATTGGGTA CTCGATGATGGTCATTCGATCAAGCTGGGCACCCAAGGGCTCTGAAGGGTCCAATTCCAC GTATGTTGTCTGCTTCCCTCGACACATCTGCTTTGGAACAAGAAGACGCATAGCTTCTAT GGGTCTCATGCAAAATTTCCTAATCTTTCGCACGAGATCGGCTCTGAGCTTGCCATCACT GCCAAGCTGTCGCTCCAAAACCTTTGCTAGGCTCTCATTTTCATCTGCACTAGAACTAAT CAGCACAAAATCTGTTGAATGGAAATGCCACTCAACTCTCCAAAAAATGCACTTCCTCCT TTTGCAATACCGTGTAGAGTTGTCAACTCTTTTGGTCATGCCTCTTGGCAATATCACTAA ATTGATTCTACGCCTCCTTGCTTCTCTTTTCAAAATCGAGAGACGTTCATATGGCTCCAG CTTCCTTGTATTAAACGGTGCCCTGAATCTTCTAGCTGATTCTGATT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5RF97 |
Definition |
sp|Q5RF97|ZNHI6_PONAB Zinc finger HIT domain-containing protein 6 OS=Pongo abelii |
Align length |
143 |
Score (bit) |
68.2 |
E-value |
2.0e-11 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SHP9 |
Definition |
tr|A9SHP9|A9SHP9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
176 |
Score (bit) |
115.0 |
E-value |
1.0e-24 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916122|Adiantum capillus-veneris mRNA, clone: YMU001_000083_D06. (527 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SHP9|A9SHP9_PHYPA Predicted protein OS=Physcomitrella paten... 115 1e-24 tr|Q0WTZ4|Q0WTZ4_ARATH Putative uncharacterized protein At1g0494... 105 1e-21 tr|A8MRX6|A8MRX6_ARATH Uncharacterized protein At1g04945.1 OS=Ar... 105 1e-21 tr|A5AJP4|A5AJP4_VITVI Putative uncharacterized protein (Chromos... 103 7e-21 tr|A7R6P0|A7R6P0_VITVI Chromosome undetermined scaffold_1365, wh... 100 6e-20 tr|Q5JMS5|Q5JMS5_ORYSJ cDNA clone:001-203-D08, full insert seque... 94 5e-18 tr|A3A1S6|A3A1S6_ORYSJ Putative uncharacterized protein OS=Oryza... 94 5e-18 tr|A2WZD4|A2WZD4_ORYSI Putative uncharacterized protein OS=Oryza... 94 5e-18 tr|B6UD75|B6UD75_MAIZE Putative uncharacterized protein OS=Zea m... 87 7e-16 tr|A8HNA4|A8HNA4_CHLRE Predicted protein OS=Chlamydomonas reinha... 85 3e-15 tr|Q9MAU2|Q9MAU2_ARATH F13M7.7 protein OS=Arabidopsis thaliana G... 71 4e-11 tr|B7PUH8|B7PUH8_IXOSC Putative uncharacterized protein OS=Ixode... 71 4e-11 tr|B4DP13|B4DP13_HUMAN cDNA FLJ56607 OS=Homo sapiens PE=2 SV=1 68 3e-10 tr|B2RBA1|B2RBA1_HUMAN Chromosome 1 open reading frame 181, isof... 68 3e-10 tr|B3S9S9|B3S9S9_TRIAD Putative uncharacterized protein (Fragmen... 65 2e-09 tr|Q16KT6|Q16KT6_AEDAE Putative uncharacterized protein OS=Aedes... 64 6e-09 tr|B1WC05|B1WC05_RAT Putative uncharacterized protein RGD1308723... 59 1e-07 tr|B2RW16|B2RW16_MOUSE Zinc finger, HIT type 6 (MCG7779, isoform... 59 2e-07 tr|A7PKG7|A7PKG7_VITVI Chromosome chr15 scaffold_19, whole genom... 58 3e-07 tr|Q7Q8P2|Q7Q8P2_ANOGA AGAP004678-PA OS=Anopheles gambiae GN=AGA... 55 2e-06 tr|Q75JJ4|Q75JJ4_DICDI Putative uncharacterized protein OS=Dicty... 55 3e-06 tr|Q552H6|Q552H6_DICDI Putative uncharacterized protein OS=Dicty... 55 3e-06 tr|B3MRZ6|B3MRZ6_DROAN GF20899 OS=Drosophila ananassae GN=GF2089... 51 3e-05 tr|Q4DG27|Q4DG27_TRYCR Putative uncharacterized protein OS=Trypa... 51 4e-05 tr|Q4DC88|Q4DC88_TRYCR Putative uncharacterized protein OS=Trypa... 51 4e-05 tr|Q384S0|Q384S0_9TRYP Putative uncharacterized protein OS=Trypa... 47 6e-04 tr|A7PKJ5|A7PKJ5_VITVI Chromosome chr15 scaffold_19, whole genom... 46 0.001 tr|B6AIW9|B6AIW9_9CRYT Putative uncharacterized protein OS=Crypt... 46 0.001 tr|B4L6K7|B4L6K7_DROMO GI16160 OS=Drosophila mojavensis GN=GI161... 44 0.004 tr|A2F1F5|A2F1F5_TRIVA Putative uncharacterized protein OS=Trich... 44 0.007
>tr|A9SHP9|A9SHP9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_79566 PE=4 SV=1 Length = 419
Score = 115 bits (288), Expect = 1e-24 Identities = 60/176 (34%), Positives = 98/176 (55%), Gaps = 3/176 (1%) Frame = -3
Query: 525 SESARRFRAPFNTRKLEPYERLSILKREARRRRINLVILPRGMTKRVDNSTRYCKRRKCI 346 +E+A+R RAP K E + + L+++ + R LV P GM+KR NST + ++RKCI Sbjct: 88 TEAAKRARAPLGAPKNEMHPAMKSLQQQCKMRDTALVYWPHGMSKRKSNSTFFDRKRKCI 147
Query: 345 FWRVEWHFHSTDFVLISSSADENESLAKVLERQLGSDGKLRAD---LVRKIRKFCMRPIE 175 FWR+EW F TD ++++ DEN +L ++E+ + RAD ++ ++R F I Sbjct: 148 FWRIEWTFEGTDVRIVNARVDENSTLKSLIEKHF----EARADNVPVITQLRHFTRCHIT 203
Query: 174 AMRLLVPKQMCRGKQTTYVELDPSEPLGAQLDRMTIIEYPIILVVSPDDDTKFTII 7 ++L K+ C G + Y ELD + +QL T+ E+ +I V D KF ++ Sbjct: 204 ELKLYFQKEPCEGNKKIYYELDMESTVRSQLSHKTVFEFLVIHVALSADPVKFPVV 259
>tr|Q0WTZ4|Q0WTZ4_ARATH Putative uncharacterized protein At1g04945 OS=Arabidopsis thaliana GN=At1g04945 PE=2 SV=1 Length = 392
Score = 105 bits (263), Expect = 1e-21 Identities = 55/154 (35%), Positives = 85/154 (55%) Frame = -3
Query: 462 LSILKREARRRRINLVILPRGMTKRVDNSTRYCKRRKCIFWRVEWHFHSTDFVLISSSAD 283 L L+ A RR L LP GM KR +N +RY R KCI W +EW FHSTD +L+ Sbjct: 97 LKSLQSAAYSRRTKLWYLPSGMLKRENNQSRYDNRSKCISWTIEWRFHSTDVILVDHGVG 156
Query: 282 ENESLAKVLERQLGSDGKLRADLVRKIRKFCMRPIEAMRLLVPKQMCRGKQTTYVELDPS 103 E+ +L V++ L + K++ FC +++++L + +Q +G + + ELD Sbjct: 157 EDRNLCSVIKNHLKP-----GPWIHKLKPFCDVDLDSLKLFI-RQYPKGAKAPFKELDIK 210
Query: 102 EPLGAQLDRMTIIEYPIILVVSPDDDTKFTIIED 1 PL QL ++ I+EYP+I V P +F +I+D Sbjct: 211 APLRKQLAKVVILEYPVIHVYLPSQSYEFKVIKD 244
>tr|A8MRX6|A8MRX6_ARATH Uncharacterized protein At1g04945.1 OS=Arabidopsis thaliana GN=At1g04945 PE=4 SV=1 Length = 367
Score = 105 bits (263), Expect = 1e-21 Identities = 55/154 (35%), Positives = 85/154 (55%) Frame = -3
Query: 462 LSILKREARRRRINLVILPRGMTKRVDNSTRYCKRRKCIFWRVEWHFHSTDFVLISSSAD 283 L L+ A RR L LP GM KR +N +RY R KCI W +EW FHSTD +L+ Sbjct: 97 LKSLQSAAYSRRTKLWYLPSGMLKRENNQSRYDNRSKCISWTIEWRFHSTDVILVDHGVG 156
Query: 282 ENESLAKVLERQLGSDGKLRADLVRKIRKFCMRPIEAMRLLVPKQMCRGKQTTYVELDPS 103 E+ +L V++ L + K++ FC +++++L + +Q +G + + ELD Sbjct: 157 EDRNLCSVIKNHLKP-----GPWIHKLKPFCDVDLDSLKLFI-RQYPKGAKAPFKELDIK 210
Query: 102 EPLGAQLDRMTIIEYPIILVVSPDDDTKFTIIED 1 PL QL ++ I+EYP+I V P +F +I+D Sbjct: 211 APLRKQLAKVVILEYPVIHVYLPSQSYEFKVIKD 244
>tr|A5AJP4|A5AJP4_VITVI Putative uncharacterized protein (Chromosome chr13 scaffold_149, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00003765001 PE=4 SV=1 Length = 385
Score = 103 bits (256), Expect = 7e-21 Identities = 62/181 (34%), Positives = 94/181 (51%), Gaps = 6/181 (3%) Frame = -3
Query: 525 SESARRFRAPFNTRKLEPYERLSI------LKREARRRRINLVILPRGMTKRVDNSTRYC 364 +ESA+R R KL Y +L L+ A RR L+ LP GM+KR N ++Y Sbjct: 83 AESAQRRRV-----KLCGYSQLKFPYHLRGLRNAAGSRRTKLLFLPSGMSKREKNKSQYN 137
Query: 363 KRRKCIFWRVEWHFHSTDFVLISSSADENESLAKVLERQLGSDGKLRADLVRKIRKFCMR 184 +R KCI W +EW FHSTD VL+ +EN +L+ V+E+ L K++ FC Sbjct: 138 QRSKCITWTIEWRFHSTDVVLLDHGINENSTLSSVIEKHLKP-----GPWNHKLKPFCAE 192
Query: 183 PIEAMRLLVPKQMCRGKQTTYVELDPSEPLGAQLDRMTIIEYPIILVVSPDDDTKFTIIE 4 ++ ++ + K +G ++ + ELD P+ Q + I+EYP I V P F +I+ Sbjct: 193 QLDCLKFFIRKYP-KGPRSPFHELDIRAPIRQQFANLAILEYPQIHVFLPSHSYDFDVIK 251
Query: 3 D 1 D Sbjct: 252 D 252
>tr|A7R6P0|A7R6P0_VITVI Chromosome undetermined scaffold_1365, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00008316001 PE=4 SV=1 Length = 385
Score = 100 bits (248), Expect = 6e-20 Identities = 61/181 (33%), Positives = 92/181 (50%), Gaps = 6/181 (3%) Frame = -3
Query: 525 SESARRFRAPFNTRKLEPYERLSI------LKREARRRRINLVILPRGMTKRVDNSTRYC 364 +ESA+R R KL Y +L L+ A RR L+ LP GM+KR N ++Y Sbjct: 83 AESAQRRRV-----KLCGYSQLKFPYHLRGLRNAAGSRRTKLLFLPSGMSKREKNKSQYN 137
Query: 363 KRRKCIFWRVEWHFHSTDFVLISSSADENESLAKVLERQLGSDGKLRADLVRKIRKFCMR 184 +R KCI W +EW FHSTD VL+ +EN + + V+E+ L K++ FC Sbjct: 138 QRSKCITWTIEWRFHSTDVVLLDHGINENSTFSSVIEKHLKP-----GPWNHKLKPFCAE 192
Query: 183 PIEAMRLLVPKQMCRGKQTTYVELDPSEPLGAQLDRMTIIEYPIILVVSPDDDTKFTIIE 4 ++ ++ + K +G ++ + ELD S P+ Q + I+EYP I V P F + Sbjct: 193 QLDCLKFFIRKYP-KGPRSPFHELDISAPIRQQFANLVILEYPQIHVFLPSHSYDFDATK 251
Query: 3 D 1 D Sbjct: 252 D 252
>tr|Q5JMS5|Q5JMS5_ORYSJ cDNA clone:001-203-D08, full insert sequence OS=Oryza sativa subsp. japonica GN=P0483G10.26 PE=2 SV=1 Length = 551
Score = 93.6 bits (231), Expect = 5e-18 Identities = 55/151 (36%), Positives = 83/151 (54%) Frame = -3
Query: 462 LSILKREARRRRINLVILPRGMTKRVDNSTRYCKRRKCIFWRVEWHFHSTDFVLISSSAD 283 L L++ A+RR I L LPRGM +R N +R+ R+ CI+W +EW F+STD VL + D Sbjct: 123 LFYLRKAAQRRGIWLQFLPRGMARREQNRSRHNHRKDCIYWTLEWKFNSTDVVLTDHNID 182
Query: 282 ENESLAKVLERQLGSDGKLRADLVRKIRKFCMRPIEAMRLLVPKQMCRGKQTTYVELDPS 103 E+ SL LE+ L S G + ++ + + ++L + K + + Y +L+ Sbjct: 183 EHTSLLSSLEKHL-SPGPWK----NQLTPYRNTDLRDLKLFIQKS-AKESTSPYRQLNIE 236
Query: 102 EPLGAQLDRMTIIEYPIILVVSPDDDTKFTI 10 EPLG QL + I+EYP I V P D F + Sbjct: 237 EPLGPQLRSIKIVEYPTINVFLPSDSCDFEV 267
>tr|A3A1S6|A3A1S6_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_004748 PE=4 SV=1 Length = 523
Score = 93.6 bits (231), Expect = 5e-18 Identities = 55/151 (36%), Positives = 83/151 (54%) Frame = -3
Query: 462 LSILKREARRRRINLVILPRGMTKRVDNSTRYCKRRKCIFWRVEWHFHSTDFVLISSSAD 283 L L++ A+RR I L LPRGM +R N +R+ R+ CI+W +EW F+STD VL + D Sbjct: 123 LFYLRKAAQRRGIWLQFLPRGMARREQNRSRHNHRKDCIYWTLEWKFNSTDVVLTDHNID 182
Query: 282 ENESLAKVLERQLGSDGKLRADLVRKIRKFCMRPIEAMRLLVPKQMCRGKQTTYVELDPS 103 E+ SL LE+ L S G + ++ + + ++L + K + + Y +L+ Sbjct: 183 EHTSLLSSLEKHL-SPGPWK----NQLTPYRNTDLRDLKLFIQKS-AKESTSPYRQLNIE 236
Query: 102 EPLGAQLDRMTIIEYPIILVVSPDDDTKFTI 10 EPLG QL + I+EYP I V P D F + Sbjct: 237 EPLGPQLRSIKIVEYPTINVFLPSDSCDFEV 267
>tr|A2WZD4|A2WZD4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_05312 PE=4 SV=1 Length = 551
Score = 93.6 bits (231), Expect = 5e-18 Identities = 55/151 (36%), Positives = 83/151 (54%) Frame = -3
Query: 462 LSILKREARRRRINLVILPRGMTKRVDNSTRYCKRRKCIFWRVEWHFHSTDFVLISSSAD 283 L L++ A+RR I L LPRGM +R N +R+ R+ CI+W +EW F+STD VL + D Sbjct: 123 LFYLRKAAQRRGIWLQFLPRGMARREQNRSRHNHRKDCIYWTLEWKFNSTDVVLTDHNID 182
Query: 282 ENESLAKVLERQLGSDGKLRADLVRKIRKFCMRPIEAMRLLVPKQMCRGKQTTYVELDPS 103 E+ SL LE+ L S G + ++ + + ++L + K + + Y +L+ Sbjct: 183 EHTSLLSSLEKHL-SPGPWK----NQLTPYRNTDLRDLKLFIQKS-AKESTSPYRQLNIE 236
Query: 102 EPLGAQLDRMTIIEYPIILVVSPDDDTKFTI 10 EPLG QL + I+EYP I V P D F + Sbjct: 237 EPLGPQLRSIKIVEYPTINVFLPSDSCDFEV 267
>tr|B6UD75|B6UD75_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 558
Score = 86.7 bits (213), Expect = 7e-16 Identities = 49/149 (32%), Positives = 79/149 (53%) Frame = -3
Query: 462 LSILKREARRRRINLVILPRGMTKRVDNSTRYCKRRKCIFWRVEWHFHSTDFVLISSSAD 283 L L + A RR + L LPRGM +R N +++ R+ CIFW +EW F+STD VL D Sbjct: 130 LFYLSKAAHRRGVKLCFLPRGMARREQNRSQHNYRKDCIFWTLEWKFNSTDVVLTDHGID 189
Query: 282 ENESLAKVLERQLGSDGKLRADLVRKIRKFCMRPIEAMRLLVPKQMCRGKQTTYVELDPS 103 E+ +L +LE+ L + ++ ++ + ++L + K + ++ Y L+ Sbjct: 190 EHTTLLSLLEKHL-----IPGPWKDQLTQYRNTKLHDLKLFIQK-CAKQSESPYRLLNIE 243
Query: 102 EPLGAQLDRMTIIEYPIILVVSPDDDTKF 16 EPL QL + ++EYP I V P D+ F Sbjct: 244 EPLRPQLRGILVVEYPTINVFLPSDNCDF 272
>tr|A8HNA4|A8HNA4_CHLRE Predicted protein OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_146876 PE=4 SV=1 Length = 369
Score = 84.7 bits (208), Expect = 3e-15 Identities = 54/174 (31%), Positives = 83/174 (47%), Gaps = 7/174 (4%) Frame = -3
Query: 516 ARRFRAPFNTRKLEPYERLSILKREARRRRINLVILPRGMTKRVDNSTRYCKRRKCIFWR 337 ARR R P +L + L+ L + R + L+I+P GM KR N+TRY R + +FWR Sbjct: 103 ARRCRPPAAKPQLPAH--LASLVYQGSWRSVKLLIMPPGMAKRKANTTRYDARNRTMFWR 160
Query: 336 VEWHFHSTDFV-------LISSSADENESLAKVLERQLGSDGKLRADLVRKIRKFCMRPI 178 VEW F T + DE + +VL L + A +R + + Sbjct: 161 VEWRFPGTPVAGGSGCIECVDERVDEKAVVGEVLAAHL----RHPAPNYVPLRPYAKAGL 216
Query: 177 EAMRLLVPKQMCRGKQTTYVELDPSEPLGAQLDRMTIIEYPIILVVSPDDDTKF 16 +A+R+ + K+ Y +D S+PL +QL TIIEYP+ +V P + + Sbjct: 217 DALRVFMRKEKTPANAPAYFPIDTSKPLASQLASRTIIEYPVFIVALPHEAANY 270
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