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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916130
Clone id YMU001_000083_E04
Library
Length 323
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000083_E04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GTCATACGATCTGATGGCTATGAGCATTTGAAAGAGAGCTGCCCTTCATTGCAATGTGAA
CTTTTGAAAGCTGTTGCTGGTGTCGAGGTTGATGCCGAGGTGGAGATTCCAGTTGTTGTG
AACAAGAAGGCAATCATAGAGGTACCCGCTTTAGACGGAGCAGATGCCAATGGCAGAAGA
GTGAGGTCCAGAGCCTAATGTGTGGAAGAAGTAGCTTTGTGCTAACTTGATGGATTAGTA
GGCTTGGAGAAACTGACCTAGTTCTGTGGAACTTCATTTGCTATGGCATTATCCACTGCT
TTATTTGTAGCTCTGAGGTTGTA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916130|Adiantum capillus-veneris mRNA, clone:
YMU001_000083_E04.
         (323 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done

 ***** No hits found ******
tr_hit_id A9TCQ8
Definition tr|A9TCQ8|A9TCQ8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 64
Score (bit) 48.5
E-value 0.0002
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916130|Adiantum capillus-veneris mRNA, clone:
YMU001_000083_E04.
         (323 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TCQ8|A9TCQ8_PHYPA Predicted protein OS=Physcomitrella paten...    49   2e-04
tr|A9T0Y5|A9T0Y5_PHYPA Predicted protein OS=Physcomitrella paten...    48   3e-04
tr|A9TWM0|A9TWM0_PHYPA Predicted protein OS=Physcomitrella paten...    47   4e-04
tr|A9NUQ7|A9NUQ7_PICSI Putative uncharacterized protein OS=Picea...    45   0.002
tr|B4FQ32|B4FQ32_MAIZE Putative uncharacterized protein OS=Zea m...    44   0.004
tr|A7PU55|A7PU55_VITVI Chromosome chr7 scaffold_31, whole genome...    44   0.005
tr|B6TPG4|B6TPG4_MAIZE Speckle-type POZ protein OS=Zea mays PE=2...    43   0.007
tr|B4FNG2|B4FNG2_MAIZE Putative uncharacterized protein OS=Zea m...    43   0.007
tr|B4F9H2|B4F9H2_MAIZE Putative uncharacterized protein OS=Zea m...    43   0.007
tr|Q8L765|Q8L765_ARATH Putative uncharacterized protein At5g1900...    43   0.009
tr|Q852K2|Q852K2_ORYSJ Expressed protein OS=Oryza sativa subsp. ...    42   0.012
tr|Q84VC1|Q84VC1_ORYSJ Zinc finger POZ domain protein (Fragment)...    42   0.012
tr|Q10C73|Q10C73_ORYSJ Os03g0792500 protein OS=Oryza sativa subs...    42   0.012
tr|B6TJ67|B6TJ67_MAIZE Speckle-type POZ protein OS=Zea mays PE=2...    42   0.012
tr|A3ANI2|A3ANI2_ORYSJ Putative uncharacterized protein OS=Oryza...    42   0.012
tr|A2XMT4|A2XMT4_ORYSI Putative uncharacterized protein OS=Oryza...    42   0.012
tr|Q8LI88|Q8LI88_ORYSJ Os07g0167200 protein OS=Oryza sativa subs...    42   0.015
tr|Q8H3E5|Q8H3E5_ORYSJ Os07g0655300 protein OS=Oryza sativa subs...    42   0.015
tr|B8B7L7|B8B7L7_ORYSI Putative uncharacterized protein OS=Oryza...    42   0.015
tr|B8B5D4|B8B5D4_ORYSI Putative uncharacterized protein OS=Oryza...    42   0.015
tr|A3BGX7|A3BGX7_ORYSJ Putative uncharacterized protein OS=Oryza...    42   0.015
tr|B4FFE1|B4FFE1_MAIZE Putative uncharacterized protein OS=Zea m...    42   0.020
tr|A7NWE2|A7NWE2_VITVI Chromosome chr5 scaffold_2, whole genome ...    41   0.034
tr|A7PG96|A7PG96_VITVI Chromosome chr6 scaffold_15, whole genome...    40   0.044
tr|Q9M8J9|Q9M8J9_ARATH F28L1.13 protein OS=Arabidopsis thaliana ...    40   0.058
tr|B6TV51|B6TV51_MAIZE Speckle-type POZ protein OS=Zea mays PE=2...    40   0.058
tr|B4FTH6|B4FTH6_MAIZE Putative uncharacterized protein OS=Zea m...    39   0.098
tr|Q9SRV1|Q9SRV1_ARATH F20H23.23 protein (AT3g03740/F20H23_23) O...    39   0.13 
tr|Q8LGI9|Q8LGI9_ARATH Putative uncharacterized protein OS=Arabi...    39   0.13 
tr|B0FUP7|B0FUP7_ARALY At3g03740-like protein (Fragment) OS=Arab...    39   0.13 

>tr|A9TCQ8|A9TCQ8_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_143618 PE=4 SV=1
          Length = 396

 Score = 48.5 bits (114), Expect = 2e-04
 Identities = 27/64 (42%), Positives = 37/64 (57%)
 Frame = +1

Query: 1   VIRSDGYEHLKESCPSLQCELLKXXXXXXXXXXXXIPVVVNKKAIIEVPALDGADANGRR 180
           V+ S+G+E+L++SCP+LQ ELLK              V+ N+   +     DGADA GRR
Sbjct: 333 VMHSEGFEYLRDSCPTLQSELLK-TVAGVYEEGVGTGVISNRNRSVWGQMSDGADAGGRR 391

Query: 181 VRSR 192
           VR R
Sbjct: 392 VRPR 395


>tr|A9T0Y5|A9T0Y5_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_217835 PE=4 SV=1
          Length = 402

 Score = 47.8 bits (112), Expect = 3e-04
 Identities = 26/64 (40%), Positives = 38/64 (59%)
 Frame = +1

Query: 1   VIRSDGYEHLKESCPSLQCELLKXXXXXXXXXXXXIPVVVNKKAIIEVPALDGADANGRR 180
           V++S+G+E+L++SCP+LQ ELLK              V+ N+   +     DG DA+GRR
Sbjct: 339 VMQSEGFEYLRDSCPTLQSELLK-TVAGVCEESVVTGVISNRNRSVWGQLSDGTDASGRR 397

Query: 181 VRSR 192
           VR R
Sbjct: 398 VRPR 401


>tr|A9TWM0|A9TWM0_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_226178 PE=4 SV=1
          Length = 401

 Score = 47.4 bits (111), Expect = 4e-04
 Identities = 27/64 (42%), Positives = 36/64 (56%)
 Frame = +1

Query: 1   VIRSDGYEHLKESCPSLQCELLKXXXXXXXXXXXXIPVVVNKKAIIEVPALDGADANGRR 180
           V+ S+G+E+L++SCP+LQ ELLK              V  N+   +     DGADA GRR
Sbjct: 338 VMHSEGFEYLRDSCPTLQSELLK-TVAGVYEEGVGTGVTSNRNRSVWGQLSDGADAGGRR 396

Query: 181 VRSR 192
           VR R
Sbjct: 397 VRPR 400


>tr|A9NUQ7|A9NUQ7_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 411

 Score = 44.7 bits (104), Expect = 0.002
 Identities = 27/64 (42%), Positives = 31/64 (48%)
 Frame = +1

Query: 1   VIRSDGYEHLKESCPSLQCELLKXXXXXXXXXXXXIPVVVNKKAIIEVPALDGADANGRR 180
           V+RS G+E+LKE CP LQ ELLK                  K   +     DG D NGRR
Sbjct: 352 VMRSKGFEYLKEKCPLLQSELLKTVAHFEDDCSSG-----GKTRSVWAQLSDGTDINGRR 406

Query: 181 VRSR 192
           VR R
Sbjct: 407 VRPR 410


>tr|B4FQ32|B4FQ32_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 428

 Score = 43.9 bits (102), Expect = 0.004
 Identities = 23/64 (35%), Positives = 35/64 (54%)
 Frame = +1

Query: 1   VIRSDGYEHLKESCPSLQCELLKXXXXXXXXXXXXIPVVVNKKAIIEVPALDGADANGRR 180
           VIR++G+++LK++CPSLQ E+L+            +     K   +     DG D +GRR
Sbjct: 369 VIRTEGFDYLKDNCPSLQSEILRTVAGCEEPCSSGL-----KSQSVWAQLSDGGDTSGRR 423

Query: 181 VRSR 192
           VR R
Sbjct: 424 VRPR 427


>tr|A7PU55|A7PU55_VITVI Chromosome chr7 scaffold_31, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00023662001
           PE=4 SV=1
          Length = 171

 Score = 43.5 bits (101), Expect = 0.005
 Identities = 26/64 (40%), Positives = 37/64 (57%)
 Frame = +1

Query: 1   VIRSDGYEHLKESCPSLQCELLKXXXXXXXXXXXXIPVVVNKKAIIEVPALDGADANGRR 180
           V+++DG+E+LKESCPS+  ELL+              V+V +        LDG+D NGRR
Sbjct: 114 VMQTDGFEYLKESCPSVLTELLEYVARVSEH-----SVIVCRHG--NEAILDGSDINGRR 166

Query: 181 VRSR 192
           V+ R
Sbjct: 167 VKQR 170


>tr|B6TPG4|B6TPG4_MAIZE Speckle-type POZ protein OS=Zea mays PE=2
           SV=1
          Length = 422

 Score = 43.1 bits (100), Expect = 0.007
 Identities = 23/64 (35%), Positives = 34/64 (53%)
 Frame = +1

Query: 1   VIRSDGYEHLKESCPSLQCELLKXXXXXXXXXXXXIPVVVNKKAIIEVPALDGADANGRR 180
           V+++DG+++L++SCPSL  ELL+                     +     LDG DANGRR
Sbjct: 366 VMQTDGFDYLQQSCPSLLTELLEYVAKAGEHSV--------SPCLYSTEVLDGGDANGRR 417

Query: 181 VRSR 192
           V+ R
Sbjct: 418 VKPR 421


>tr|B4FNG2|B4FNG2_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 426

 Score = 43.1 bits (100), Expect = 0.007
 Identities = 23/64 (35%), Positives = 34/64 (53%)
 Frame = +1

Query: 1   VIRSDGYEHLKESCPSLQCELLKXXXXXXXXXXXXIPVVVNKKAIIEVPALDGADANGRR 180
           V+++DG+++L++SCPSL  ELL+                     +     LDG DANGRR
Sbjct: 370 VMQTDGFDYLQQSCPSLLTELLEYVAKIGEHSV--------SPCLYSTEVLDGGDANGRR 421

Query: 181 VRSR 192
           V+ R
Sbjct: 422 VKPR 425


>tr|B4F9H2|B4F9H2_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 422

 Score = 43.1 bits (100), Expect = 0.007
 Identities = 23/64 (35%), Positives = 34/64 (53%)
 Frame = +1

Query: 1   VIRSDGYEHLKESCPSLQCELLKXXXXXXXXXXXXIPVVVNKKAIIEVPALDGADANGRR 180
           V+++DG+++L++SCPSL  ELL+                     +     LDG DANGRR
Sbjct: 366 VMQTDGFDYLQQSCPSLLTELLEYVAKAGEHSV--------SPCLYSTEVLDGGDANGRR 417

Query: 181 VRSR 192
           V+ R
Sbjct: 418 VKPR 421


>tr|Q8L765|Q8L765_ARATH Putative uncharacterized protein At5g19000
           OS=Arabidopsis thaliana GN=At5g19000 PE=2 SV=1
          Length = 407

 Score = 42.7 bits (99), Expect = 0.009
 Identities = 26/64 (40%), Positives = 38/64 (59%)
 Frame = +1

Query: 1   VIRSDGYEHLKESCPSLQCELLKXXXXXXXXXXXXIPVVVNKKAIIEVPALDGADANGRR 180
           V+++DG+++LKESCPSL  ELL+            + V  ++K I      DG DA+GRR
Sbjct: 349 VMQTDGFDYLKESCPSLLTELLQ---YVARLSEHSVIVSGHRKEIF----ADGCDASGRR 401

Query: 181 VRSR 192
           V+ R
Sbjct: 402 VKPR 405