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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916134
Clone id YMU001_000083_E08
Library
Length 499
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000083_E08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TGTAAGACCAAGGCTAAATGAGGGATATAACCCTAAGTAAATTCAAGTGGAAGACTAAGC
AGGCATCCATCACCTTACAAGCATCATCATGGTCCATACTTCAAAGTTTTGGAATCCATG
GGATTGGGAGCCAGTTAGCAAGGCAGCAGGAGAAAAATGTCACGGTACAAACAAAGAGGA
ACAAGGTTCAGCAAAGAATAGTGAAGTAGGACATGCCTATTACAACCTATATGCTTGTTT
GTGTGTGTGTGTGGCTATGAAAGCTACATGGTGTAGTATGTGCAAGTATCGTATGTGAGT
GCGTGTATCATTGAAAGCGGAATGGAGTCTTGCAGTGCTTAGCATGGGATGGAGTGCCCA
TTAGCAAATCAGAGGATGTGGACATCTAGGTATCCCCAAGGGGTGTAGTACTGGCATACA
GAAGGGATCGCGGTGCAGGGCCCACATTGAAGCAAGCATGAACCATGCAGCTATCTTGTC
TATGTAGAATTGGTTTAGA
■■Homology search results ■■ -
sp_hit_id Q7Z340
Definition sp|Q7Z340|ZN551_HUMAN Zinc finger protein 551 OS=Homo sapiens
Align length 64
Score (bit) 31.6
E-value 2.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916134|Adiantum capillus-veneris mRNA, clone:
YMU001_000083_E08.
         (499 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q7Z340|ZN551_HUMAN Zinc finger protein 551 OS=Homo sapiens GN...    32   2.1  
sp|P38898|YH17_YEAST Putative uncharacterized protein YHR217C OS...    30   6.3  
sp|Q6T393|SPT20_RAT Spermatogenesis-associated protein 20 OS=Rat...    30   6.3  

>sp|Q7Z340|ZN551_HUMAN Zinc finger protein 551 OS=Homo sapiens
           GN=ZNF551 PE=1 SV=3
          Length = 670

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 19/64 (29%), Positives = 29/64 (45%)
 Frame = -1

Query: 454 CFNVGPAPRSLLYASTTPLGDT*MSTSSDLLMGTPSHAKHCKTPFRFQ*YTHSHTILAHT 275
           C    PAP  LL    TP G+   S+SS  +    +   + K     +  +H HT++ H 
Sbjct: 183 CGEAFPAPTDLLQHEATPSGEEPHSSSSKHIQAFFNAKSYYKWGEYRKASSHKHTLVQHQ 242

Query: 274 TPCS 263
           + CS
Sbjct: 243 SVCS 246


>sp|P38898|YH17_YEAST Putative uncharacterized protein YHR217C
           OS=Saccharomyces cerevisiae GN=YHR217C PE=5 SV=1
          Length = 153

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = -1

Query: 355 TPSHAK-HCKTPFRFQ*YTHSHTILAHTTPCSFHSHTHT 242
           TP+H   H  TP     + H HT   HTTP     HTHT
Sbjct: 32  TPTHTHPHTPTPTP---HPHPHTPHPHTTPTPTPHHTHT 67


>sp|Q6T393|SPT20_RAT Spermatogenesis-associated protein 20 OS=Rattus
           norvegicus GN=Spata20 PE=1 SV=1
          Length = 789

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 16/51 (31%), Positives = 20/51 (39%), Gaps = 11/51 (21%)
 Frame = +2

Query: 95  HTSKFWNPWDWEPVSKAAGEK-----------CHGTNKEEQGSAKNSEVGH 214
           H    W PW  E   KA  E            CH  +  E+ S +N E+GH
Sbjct: 81  HNPVDWYPWGQEAFDKAKKENKPIFLSVGYSTCHWCHMMEEESFQNEEIGH 131
tr_hit_id Q0GNK9
Definition tr|Q0GNK9|Q0GNK9_9ZZZZ Putative uncharacterized protein OS=uncultured organism
Align length 35
Score (bit) 33.5
E-value 1.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916134|Adiantum capillus-veneris mRNA, clone:
YMU001_000083_E08.
         (499 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q0GNK9|Q0GNK9_9ZZZZ Putative uncharacterized protein OS=uncul...    34   1.8  
tr|B2AP62|B2AP62_PODAN Predicted CDS Pa_7_460 OS=Podospora anser...    35   2.0  
tr|A8NQX6|A8NQX6_BRUMA T-cell receptor beta chain ANA 11, putati...    28   2.5  
tr|B4N8T4|B4N8T4_DROWI GK10970 OS=Drosophila willistoni GN=GK109...    27   5.4  
tr|A8P087|A8P087_BRUMA T-cell receptor beta chain ANA 11, putati...    29   6.5  
tr|A9V5H0|A9V5H0_MONBE Predicted protein OS=Monosiga brevicollis...    31   6.8  
tr|A8NHV5|A8NHV5_BRUMA T-cell receptor beta chain ANA 11, putati...    29   9.0  

>tr|Q0GNK9|Q0GNK9_9ZZZZ Putative uncharacterized protein
           OS=uncultured organism PE=4 SV=1
          Length = 140

 Score = 33.5 bits (75), Expect(2) = 1.8
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -1

Query: 340 KHCKTPFRFQ*YTHSHTILAHTTPCSFHSHTHTQT 236
           ++C TP     +TH+HT     TP   H+HTHT T
Sbjct: 43  RYCHTPHT---HTHTHTHTHTHTPTHTHTHTHTHT 74



 Score = 20.8 bits (42), Expect(2) = 1.8
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -3

Query: 251 HTHTNKHIGCNRHVLLH 201
           HTHT+ H   + H   H
Sbjct: 67  HTHTHTHTHTHTHTHTH 83



 Score = 34.3 bits (77), Expect = 3.3
 Identities = 18/40 (45%), Positives = 22/40 (55%)
 Frame = -1

Query: 355 TPSHAKHCKTPFRFQ*YTHSHTILAHTTPCSFHSHTHTQT 236
           TP+H  H  T      +TH+HT   HTT    H+HTHT T
Sbjct: 62  TPTHT-HTHTHTHTHTHTHTHT---HTTHTHTHTHTHTHT 97


>tr|B2AP62|B2AP62_PODAN Predicted CDS Pa_7_460 OS=Podospora anserina
           PE=4 SV=1
          Length = 431

 Score = 35.0 bits (79), Expect = 2.0
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
 Frame = -1

Query: 406 TPLGDT*MSTSSDLLMGTPSHAK-----HCKTPFRFQ*YTHSHTILAHTTPCSFHSHTHT 242
           T   +T +ST +++L+ T +H       H +T    Q  TH HT     T    H+ THT
Sbjct: 131 TATAETLVSTITEVLIETETHTHVQTDTHLQTDTHLQTDTHFHTESHFHTDTQLHTETHT 190

Query: 241 QT 236
           QT
Sbjct: 191 QT 192


>tr|A8NQX6|A8NQX6_BRUMA T-cell receptor beta chain ANA 11, putative
           OS=Brugia malayi GN=Bm1_07880 PE=4 SV=1
          Length = 97

 Score = 28.1 bits (61), Expect(2) = 2.5
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -1

Query: 337 HCKTPFRFQ*YTHSHTILAHTTPCSFHSHTHTQTSI 230
           H  T  R   +TH+HT   HT   + H+HTHT T I
Sbjct: 32  HTHTHTRTHTHTHTHT---HTHTYT-HTHTHTHTHI 63



 Score = 25.8 bits (55), Expect(2) = 2.5
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -3

Query: 251 HTHTNKHIGCNRHVLLHYSLLNLVPLCLYRDIFL 150
           HTHT+ HI  + H   H + +++  L   +DIF+
Sbjct: 56  HTHTHTHIHTHTHTQTH-TYIHIHLLITIKDIFV 88


>tr|B4N8T4|B4N8T4_DROWI GK10970 OS=Drosophila willistoni GN=GK10970
           PE=4 SV=1
          Length = 685

 Score = 27.3 bits (59), Expect(2) = 5.4
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
 Frame = -1

Query: 367 LLMGTPSHAK-HCKTPFRFQ*YTHSHTILAHTTPCSFH--SHTHTQTSI 230
           +L G P+H   H         +TH+H + AHT P   H   H HT   +
Sbjct: 72  VLKGRPNHGHGHAHA------HTHAHQLAAHTHPVHAHVLPHPHTHAHL 114



 Score = 25.0 bits (53), Expect(2) = 5.4
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -3

Query: 254 PHTHTNKHIGCNRHVLLHYSLLNLVPLCLYRDIFL 150
           PH HT+ H+  + H L H  L    PL L   ++L
Sbjct: 106 PHPHTHAHLHAHTHHLQHLRLAPR-PLKLSAPVYL 139


>tr|A8P087|A8P087_BRUMA T-cell receptor beta chain ANA 11, putative
           (Fragment) OS=Brugia malayi GN=Bm1_13290 PE=4 SV=1
          Length = 133

 Score = 28.9 bits (63), Expect(2) = 6.5
 Identities = 14/34 (41%), Positives = 15/34 (44%)
 Frame = -1

Query: 337 HCKTPFRFQ*YTHSHTILAHTTPCSFHSHTHTQT 236
           H  T      YTH HT     T    H+HTHT T
Sbjct: 53  HIHTQIYVHIYTHIHTHTHTHTHTHTHTHTHTHT 86



 Score = 23.5 bits (49), Expect(2) = 6.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 251 HTHTNKHIGCNRHVLLH 201
           HTHT+ HI    H  +H
Sbjct: 101 HTHTHTHIHTQTHTHIH 117


>tr|A9V5H0|A9V5H0_MONBE Predicted protein OS=Monosiga brevicollis
           GN=33452 PE=4 SV=1
          Length = 1021

 Score = 31.2 bits (69), Expect(2) = 6.8
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -1

Query: 334 CKTPFRFQ*YTHSHTILAHTTPCSFHSHTHTQT 236
           C+T F    +TH+HT     T    H+HTHT T
Sbjct: 4   CQTFFNTNTHTHTHTHTHTHTHTHTHTHTHTHT 36



 Score = 20.8 bits (42), Expect(2) = 6.8
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -3

Query: 251 HTHTNKHIGCNRHVLLH 201
           HTHT+ H   + H   H
Sbjct: 29  HTHTHTHTHTHTHTHTH 45


>tr|A8NHV5|A8NHV5_BRUMA T-cell receptor beta chain ANA 11, putative
           (Fragment) OS=Brugia malayi GN=Bm1_02870 PE=4 SV=1
          Length = 90

 Score = 29.3 bits (64), Expect(2) = 9.0
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = -1

Query: 382 STSSDLLMGTPSHAKHCKTPFRFQ*YTHSHTILAHTTPCSFHSHTHTQT 236
           ++S  +L+     + H  T      +TH+HT     T    H+HTHT T
Sbjct: 3   NSSERVLISMQKISTHTHTHTHTHTHTHTHTHTHTHTHTHTHTHTHTHT 51



 Score = 22.7 bits (47), Expect(2) = 9.0
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 251 HTHTNKHIGCNRHVLLH 201
           HTHT+ H   + H  +H
Sbjct: 48  HTHTHTHTHTHTHTYIH 64