BP916166
Clone id YMU001_000084_A10
Library
Length 482
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000084_A10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TCTGGCACACCATCTGAACGCAATTGAAACCTGCATTGTTCTCCAAAACCAGCTGACGAT
CCTGCATCAAAACGCTGTTGAAGCCATTTAATACACCAGCACTCGCCTTGCTGAAACCTG
AATTAACTTTACTGCTAGCCGCACTCTCCAAACTGCAGCCAACCCCATTTCCCTCGATTA
CTTTCTTCATCATCAAAGCCCATGTCAAGGAGATCACTCTTAGTTTCACGTAAGCGTTCC
AAATTATCCAGGCCTTTCTGCATTTCATGGTTTGCTTTGTTGAACTCAAAACCCCCTCTC
ATTGTGACACCACTGTCCAGCGTACCATCCAAACCTTCAATCTCTTTGGAATCACCTCCT
AATTCAGCCCCAAGGCACATGTCAAATATCAGGCTCTTGCTTTCTGGAGGAATCATGTTG
TGTGCAGGAACATCTGCTTTTCGTCCACTTTTGCCACTTGCATTCCCTTGATCTAGCGCA
TT
■■Homology search results ■■ -
sp_hit_id Q9Z398
Definition sp|Q9Z398|PMP9_CHLPN Probable outer membrane protein pmp9 OS=Chlamydia pneumoniae
Align length 66
Score (bit) 33.1
E-value 0.68
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916166|Adiantum capillus-veneris mRNA, clone:
YMU001_000084_A10.
(482 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9Z398|PMP9_CHLPN Probable outer membrane protein pmp9 OS=Chl... 33 0.68
sp|Q5AZM3|SEC31_EMENI Protein transport protein sec31 OS=Emerice... 32 2.0
sp|Q09ME5|RPOA_CITSI DNA-directed RNA polymerase subunit alpha O... 31 3.4
sp|Q8EUM5|GRPE_MYCPE Protein grpE OS=Mycoplasma penetrans GN=grp... 31 3.4
sp|A0LLA4|RECA_SYNFM Protein recA OS=Syntrophobacter fumaroxidan... 30 5.7
sp|P03332|GAG_MLVMO Gag polyprotein OS=Moloney murine leukemia v... 30 5.7
sp|Q4I327|BFR2_GIBZE Protein BFR2 OS=Gibberella zeae GN=BFR2 PE=... 30 5.7
sp|Q5BKY6|YV018_HUMAN Putative uncharacterized protein DKFZp434K... 30 7.5
sp|P18192|PGLR1_PECCC Endo-polygalacturonase OS=Pectobacterium c... 30 7.5
sp|Q8NQV3|GPDA_CORGL Glycerol-3-phosphate dehydrogenase [NAD(P)+... 30 7.5
sp|A4QDT3|GPDA_CORGB Glycerol-3-phosphate dehydrogenase [NAD(P)+... 30 7.5
sp|P03333|GAG_MLVAB Gag polyprotein OS=Abelson murine leukemia v... 30 7.5
sp|Q8R2Q6|TECT3_MOUSE Tectonic-3 OS=Mus musculus GN=Tctn3 PE=2 SV=1 29 9.8
sp|O75325|LRRN2_HUMAN Leucine-rich repeat neuronal protein 2 OS=... 29 9.8
sp|P32594|GAG_MSVMT Gag polyprotein OS=Moloney murine sarcoma vi... 29 9.8
sp|P03334|GAG_MSVMO Gag polyprotein OS=Moloney murine sarcoma vi... 29 9.8
sp|P26806|GAG_MLVFF Gag polyprotein OS=Friend murine leukemia vi... 29 9.8
sp|Q923L3|CSMD1_MOUSE CUB and sushi domain-containing protein 1 ... 29 9.8

>sp|Q9Z398|PMP9_CHLPN Probable outer membrane protein pmp9
OS=Chlamydia pneumoniae GN=pmp9 PE=2 SV=1
Length = 928

Score = 33.1 bits (74), Expect = 0.68
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = -2

Query: 244 IWNAYVKLRVISLTWALMMKKVIEGNGVGCSLES----AASSKVNSGFSKASAGVLNGFN 77
+W ++V +R I A +++ E G+ C S S+K+N GF SAG + G
Sbjct: 615 LWGSFVDVRSIQQLVATKVRQSQETRGIWCEGISNFFHKDSTKINKGFRHISAGYVVGAT 674

Query: 76 SVLMQD 59
+ L D
Sbjct: 675 TTLASD 680


>sp|Q5AZM3|SEC31_EMENI Protein transport protein sec31 OS=Emericella
nidulans GN=sec31 PE=3 SV=1
Length = 1275

Score = 31.6 bits (70), Expect = 2.0
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1

Query: 280 LNSKPPLIVTPLSSVPSKPSISLESPPNSAPRHMS 384
L++ PP P ++VP PS+ +PP S PR S
Sbjct: 1027 LSAVPPPPANPYAAVPQSPSVGSMAPPASIPRGSS 1061


>sp|Q09ME5|RPOA_CITSI DNA-directed RNA polymerase subunit alpha
OS=Citrus sinensis GN=rpoA PE=3 SV=1
Length = 328

Score = 30.8 bits (68), Expect = 3.4
Identities = 17/67 (25%), Positives = 32/67 (47%)
Frame = -2

Query: 205 TWALMMKKVIEGNGVGCSLESAASSKVNSGFSKASAGVLNGFNSVLMQDRQLVLENNAGF 26
T + M++V+ G G + A S K+ +S G+ + +LM + +VL +N
Sbjct: 44 TIGIAMRRVLLGEIEGTCITRAKSEKIPHEYSTI-VGIQESVHEILMNLKDIVLRSNLYG 102

Query: 25 NCVQMVC 5
C ++C
Sbjct: 103 TCDALIC 109


>sp|Q8EUM5|GRPE_MYCPE Protein grpE OS=Mycoplasma penetrans GN=grpE
PE=3 SV=1
Length = 235

Score = 30.8 bits (68), Expect = 3.4
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = -1

Query: 287 EFNKANHEMQKGLDNL--ERLRETKSDLLDMGFDD 189
EF++ N + QK +N+ E L E +SDL D FDD
Sbjct: 11 EFHEKNQQSQKDNNNVKKENLHEDQSDLNDANFDD 45


>sp|A0LLA4|RECA_SYNFM Protein recA OS=Syntrophobacter fumaroxidans
(strain DSM 10017 / MPOB) GN=recA PE=3 SV=1
Length = 343

Score = 30.0 bits (66), Expect = 5.7
Identities = 19/71 (26%), Positives = 34/71 (47%)
Frame = -1

Query: 419 NMIPPESKSLIFDMCLGAELGGDSKEIEGLDGTLDSGVTMRGGFEFNKANHEMQKGLDNL 240
N I P + + FD+ G G S+E + LD ++SG + G ++ + + +G +N
Sbjct: 251 NKIAPPFREVEFDVVYGR---GISREGDILDLAVESGAIEKSGTWYSYSGERLGQGRENA 307

Query: 239 ERLRETKSDLL 207
+ DLL
Sbjct: 308 KNFLREHPDLL 318


>sp|P03332|GAG_MLVMO Gag polyprotein OS=Moloney murine leukemia
virus GN=gag PE=1 SV=4
Length = 538

Score = 30.0 bits (66), Expect = 5.7
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Frame = +1

Query: 253 PFCISWFALLNSKPPLI------VTPLSSVPSKPSISLESPPNSAPR 375
P+ ++W AL PP + P PS PS+ LE P ++ PR
Sbjct: 81 PYIVTWEALAFDPPPWVKPFVHPKPPPPLPPSAPSLPLEPPRSTPPR 127


>sp|Q4I327|BFR2_GIBZE Protein BFR2 OS=Gibberella zeae GN=BFR2 PE=3
SV=1
Length = 538

Score = 30.0 bits (66), Expect = 5.7
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = -1

Query: 371 GAELGGDSKEIEGLDGTLDSGVTMRGGFEFNKANHEMQKGLDNLERLRETKSDLLDMGFD 192
GAELGG E E +D LD+ V G + ++ ++G + E E S+
Sbjct: 165 GAELGGSDSEDEEMDDGLDALVDGEGDSDDESDENDDEEGSGDDEEDDEDDSE------S 218

Query: 191 DEESNRGK 168
DEE ++ K
Sbjct: 219 DEEDSKAK 226


>sp|Q5BKY6|YV018_HUMAN Putative uncharacterized protein DKFZp434K191
OS=Homo sapiens PE=2 SV=1
Length = 102

Score = 29.6 bits (65), Expect = 7.5
Identities = 18/58 (31%), Positives = 24/58 (41%)
Frame = +2

Query: 308 HHCPAYHPNLQSLWNHLLIQPQGTCQISGSCFLEESCCVQEHLLFVHFCHLHSLDLAH 481
HHCP HP +L +P T + G + C H + H H +LDL H
Sbjct: 24 HHCPHLHP--------VLRRPTLT-DVEGCLQCLDVCGHPRHAVDAHLLHASALDLLH 72


>sp|P18192|PGLR1_PECCC Endo-polygalacturonase OS=Pectobacterium
carotovorum subsp. carotovorum GN=peh PE=3 SV=1
Length = 402

Score = 29.6 bits (65), Expect = 7.5
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -2

Query: 181 VIEGNGVGCSLESAASSKVNSGFSKASAGVLNGFNSVLMQDRQL 50
V++ NG GC A+S NSG G ++G V +QD+++
Sbjct: 117 VVDTNGKGCDAFITATSTTNSGI--YGPGTIDGQGGVKLQDKKV 158


>sp|Q8NQV3|GPDA_CORGL Glycerol-3-phosphate dehydrogenase [NAD(P)+]
OS=Corynebacterium glutamicum GN=gpsA PE=3 SV=1
Length = 332

Score = 29.6 bits (65), Expect = 7.5
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = -1

Query: 374 LGAELGGDSKEIEGLDGTLDSGVTMRGGFEFNKANHEMQKGLDNLERLRETKSDLLDMGF 195
LGA LG D+K GL G D T N++ E ++LE+ RE + + G
Sbjct: 225 LGATLGADAKTFSGLAGMGDLVATCSSPLSRNRSFGERLGQGESLEKAREATNGQVAEGV 284

Query: 194 DDEES 180
+S
Sbjct: 285 ISSQS 289


tr_hit_id B3KZ12
Definition tr|B3KZ12|B3KZ12_PLAKH Erythrocyte membrane protein, putative OS=Plasmodium knowlesi (strain H)
Align length 52
Score (bit) 35.0
E-value 1.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916166|Adiantum capillus-veneris mRNA, clone:
YMU001_000084_A10.
(482 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B3KZ12|B3KZ12_PLAKH Erythrocyte membrane protein, putative OS... 35 1.8
tr|B2J5S0|B2J5S0_NOSP7 K+-transporting ATPase, B subunit OS=Nost... 33 7.0
tr|B0XGH2|B0XGH2_CULQU 26S protease regulatory subunit 6a OS=Cul... 33 7.0
tr|A4H8E4|A4H8E4_LEIBR Putative uncharacterized protein OS=Leish... 33 7.0
tr|A9EVR3|A9EVR3_SORC5 Conserved carbohydrate-binding protein, R... 33 9.2

>tr|B3KZ12|B3KZ12_PLAKH Erythrocyte membrane protein, putative
OS=Plasmodium knowlesi (strain H) GN=PKH_010490 PE=4 SV=1
Length = 1769

Score = 35.0 bits (79), Expect = 1.8
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = -2

Query: 172 GNGVGCSLESAASSKVNSGFSKASAGVLNGFNSVLMQDRQLVLENNAGFNCV 17
GNG CS + ++ K N +SK+ + ++ + +D ++ ENN+G N V
Sbjct: 1419 GNGNNCSSNNKSAMKTNGEYSKSGSKLMGNNQKLNKKDPLVMYENNSGNNSV 1470


>tr|B2J5S0|B2J5S0_NOSP7 K+-transporting ATPase, B subunit OS=Nostoc
punctiforme (strain ATCC 29133 / PCC 73102)
GN=Npun_R0301 PE=4 SV=1
Length = 701

Score = 33.1 bits (74), Expect = 7.0
Identities = 25/66 (37%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = -1

Query: 407 PESKSLI-FDMCLGAELGGDSKEIEGLD---GTLDSGVTMRGGFEFNKANHEMQKGLDNL 240
PE KS+I LGA DS + EG+D T SG + GG+E K E KG
Sbjct: 369 PEGKSIIRLAEKLGARFDFDSNQAEGVDFSAKTRMSGTNLPGGYEARKGAVEAIKGFVRS 428

Query: 239 ERLRET 222
R+T
Sbjct: 429 RNGRDT 434


>tr|B0XGH2|B0XGH2_CULQU 26S protease regulatory subunit 6a OS=Culex
quinquefasciatus GN=CpipJ_CPIJ018219 PE=4 SV=1
Length = 221

Score = 33.1 bits (74), Expect = 7.0
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1

Query: 286 SKPPLIVTPLSSVPSKPSISLESPPNSAP 372
S PL+V P S +PS+P +S + PP + P
Sbjct: 3 SSQPLVVPPQSMLPSQPLVSTQPPPQTMP 31


>tr|A4H8E4|A4H8E4_LEIBR Putative uncharacterized protein OS=Leishmania
braziliensis GN=LbrM16_V2.0180 PE=4 SV=1
Length = 4433

Score = 33.1 bits (74), Expect = 7.0
Identities = 27/101 (26%), Positives = 37/101 (36%), Gaps = 1/101 (0%)
Frame = -1

Query: 449 SGRKADVPAHNMIPPES-KSLIFDMCLGAELGGDSKEIEGLDGTLDSGVTMRGGFEFNKA 273
SG V AH ES S GA G ++ T D GV + +E +
Sbjct: 1252 SGSAVMVDAHGSACEESISSPTVPAATGARAGEAEVTFGTINSTGDGGVPILHSYESDSG 1311

Query: 272 NHEMQKGLDNLERLRETKSDLLDMGFDDEESNRGKWGWLQF 150
+ +K RLR L+ DD + +RG W F
Sbjct: 1312 HSSSRKRRRGRRRLRSLFGGLIPTTTDDSDDDRGDERWRPF 1352


>tr|A9EVR3|A9EVR3_SORC5 Conserved carbohydrate-binding protein, Rhs
family OS=Sorangium cellulosum (strain So ce56)
GN=sce4086 PE=4 SV=1
Length = 1367

Score = 32.7 bits (73), Expect = 9.2
Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 12/96 (12%)
Frame = -1

Query: 434 DVPAHNMIPPESKSLIFDMCLGAELGGDSKEIEGLDGTLDSGVTMRGGFEFNKA------ 273
D P H M+P E+ + LGG E+E DGT+ + G E A
Sbjct: 300 DHPGHTMLPGEAVYHPIERLSLRCLGGSRWEVEARDGTVREFAPVPGRPEARAALQRIRS 359

Query: 272 ---NHEMQKGLD---NLERLRETKSDLLDMGFDDEE 183
NHE+ D LE +R++ L+ + DDE+
Sbjct: 360 RCRNHEIVLAYDARGRLEWVRDSAGRLVWLEHDDED 395