BP916168 |
Clone id |
YMU001_000084_B02 |
Library |
YMU01 |
Length |
497 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000084_B02. |
Accession |
BP916168 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GTGCATCACTTGCTCTTGCTGATGCGGGAATTGTTATGTATGACCTGGTTTCGGCTGTCT CCTTGAACTCTTTTGACACAAAGCTGCTTCTGGATGCAACATTGGATGAAGAGAATAGCC AGGATGGAAGCTTGATGCTAGCGTGCATGACGTCTCGAAATGAAATCACTCATCTATCGT TATCAGGGGAGTGGCCTCAAGGGAAGCTTTCTGAGGGGTTGAAGTTGTGTCTGGATGCAT GCAATAAACTGGCGGGGCTCATGAGAGTAACCTTGAAGGAGTCGATGGGTGCCGAAGCGT GAAATGAATAATAATCAATCTGATCAGATACAGGTGTGTCCTTTAGGGCATTTTGTGTGA GTGGTTGCTACTTCCTCATTGGAGAGCATTCGATGGTTTGTTGCTTGAGCGTAACAAATA GTCAAATCTTGTTTTTGGCTCTGCAGCTCCGTATATCTGTTTAGAGGAACACAGATACCC TTGACAGAAATGAGCCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6P0I8 |
Definition |
sp|Q6P0I8|EXOS6_DANRE Exosome complex exonuclease MTR3 OS=Danio rerio |
Align length |
107 |
Score (bit) |
61.2 |
E-value |
2.0e-09 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9PH32 |
Definition |
tr|A9PH32|A9PH32_POPTR Putative uncharacterized protein OS=Populus trichocarpa |
Align length |
97 |
Score (bit) |
116.0 |
E-value |
5.0e-25 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916168|Adiantum capillus-veneris mRNA, clone: YMU001_000084_B02. (497 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9PH32|A9PH32_POPTR Putative uncharacterized protein OS=Popul... 116 5e-25 tr|A9PJ38|A9PJ38_POPJC Putative uncharacterized protein OS=Popul... 115 9e-25 tr|Q75LC8|Q75LC8_ORYSJ cDNA, clone: J065066D11, full insert sequ... 110 3e-23 tr|A5BI33|A5BI33_VITVI Putative uncharacterized protein (Chromos... 110 3e-23 tr|A2XNZ0|A2XNZ0_ORYSI Putative uncharacterized protein OS=Oryza... 110 4e-23 tr|Q69UI6|Q69UI6_ORYSJ Os08g0116800 protein OS=Oryza sativa subs... 108 1e-22 tr|A2YQN5|A2YQN5_ORYSI Putative uncharacterized protein OS=Oryza... 108 1e-22 tr|Q9SZS4|Q9SZS4_ARATH Putative uncharacterized protein F27G19.9... 105 2e-21 tr|Q8GWJ0|Q8GWJ0_ARATH Putative uncharacterized protein At4g2749... 105 2e-21 tr|A2RVK7|A2RVK7_ARATH At4g27490 OS=Arabidopsis thaliana PE=2 SV=1 105 2e-21 tr|Q64B50|Q64B50_9ARCH Ribonuclease PH OS=uncultured archaeon GZ... 68 2e-10 tr|Q647V6|Q647V6_9ARCH Ribonuclease PH OS=uncultured archaeon GZ... 68 3e-10 tr|Q6MZC1|Q6MZC1_9ARCH Ribonuclease PH OS=uncultured archaeon GN... 67 4e-10 tr|Q64CA7|Q64CA7_9ARCH Ribonuclease PH OS=uncultured archaeon GZ... 67 5e-10 tr|Q64D55|Q64D55_9ARCH Ribonuclease PH OS=uncultured archaeon GZ... 66 8e-10 tr|Q55BB0|Q55BB0_DICDI Putative uncharacterized protein OS=Dicty... 66 1e-09 tr|Q5XQ92|Q5XQ92_9ARCH Ribonuclease PH OS=uncultured archaeon GZ... 66 1e-09 tr|Q649Q0|Q649Q0_9ARCH Ribonuclease PH OS=uncultured archaeon GZ... 65 1e-09 tr|Q64DM6|Q64DM6_9ARCH Ribonuclease PH OS=uncultured archaeon GZ... 65 2e-09 tr|B5XC68|B5XC68_SALSA Exosome complex exonuclease MTR3 OS=Salmo... 64 4e-09 tr|A8MA84|A8MA84_CALMQ Exosome complex exonuclease 1 OS=Caldivir... 61 3e-08 tr|B7R2K9|B7R2K9_9EURY Exosome complex exonuclease 1 OS=Thermoco... 61 3e-08 tr|Q4T603|Q4T603_TETNG Chromosome undetermined SCAF9013, whole g... 61 3e-08 tr|Q2NEX5|Q2NEX5_METST Putative exosome complex, exonuclease 1 s... 59 2e-07 tr|B5IVS6|B5IVS6_9EURY Exosome complex exonuclease 1 OS=Thermoco... 59 2e-07 tr|B6YSI2|B6YSI2_THEON 3'-5' exoribonuclease OS=Thermococcus onn... 58 3e-07 tr|Q0W2Y8|Q0W2Y8_UNCMA Putative exosome complex exonuclease 1 OS... 57 4e-07 tr|A1RXQ6|A1RXQ6_THEPD Ribosomal RNA-processing protein RRP41/SK... 57 5e-07 tr|A3MUP1|A3MUP1_PYRCJ Ribosomal RNA-processing protein RRP41/SK... 57 6e-07 tr|Q12ZB7|Q12ZB7_METBU Ribosomal RNA-processing protein RRP41/SK... 55 1e-06
>tr|A9PH32|A9PH32_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 257
Score = 116 bits (291), Expect = 5e-25 Identities = 56/97 (57%), Positives = 74/97 (76%) Frame = +3
Query: 3 ASLALADAGIVMYDLVSAVSLNSFDTKLLLDATLDEENSQDGSLMLACMTSRNEITHLSL 182 ASLALADAGI+MYDLV+ VS++ L++D L+EE+ QDGSLM+ CM SR E+T LS+ Sbjct: 158 ASLALADAGIMMYDLVAGVSVSCLGRNLIIDPILEEESFQDGSLMITCMPSRYEVTQLSI 217
Query: 183 SGEWPQGKLSEGLKLCLDACNKLAGLMRVTLKESMGA 293 +GEW KL+E ++LCLDAC+KL +MR LKE+ A Sbjct: 218 TGEWSTAKLNEAMQLCLDACSKLDKIMRACLKEAASA 254
>tr|A9PJ38|A9PJ38_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 257
Score = 115 bits (289), Expect = 9e-25 Identities = 56/97 (57%), Positives = 73/97 (75%) Frame = +3
Query: 3 ASLALADAGIVMYDLVSAVSLNSFDTKLLLDATLDEENSQDGSLMLACMTSRNEITHLSL 182 ASLALADAGI+MYDLV+ VS++ L++D L+EE+ QDGSLM+ CM SR E+T LS+ Sbjct: 158 ASLALADAGIMMYDLVAGVSVSCLGRNLIIDPILEEESFQDGSLMITCMPSRYEVTQLSI 217
Query: 183 SGEWPQGKLSEGLKLCLDACNKLAGLMRVTLKESMGA 293 +GEW KL+E + LCLDAC+KL +MR LKE+ A Sbjct: 218 TGEWSTAKLNEAMHLCLDACSKLDKIMRACLKEAASA 254
>tr|Q75LC8|Q75LC8_ORYSJ cDNA, clone: J065066D11, full insert sequence OS=Oryza sativa subsp. japonica GN=OSJNBa0032G11.15 PE=2 SV=1 Length = 260
Score = 110 bits (276), Expect = 3e-23 Identities = 52/94 (55%), Positives = 74/94 (78%) Frame = +3
Query: 3 ASLALADAGIVMYDLVSAVSLNSFDTKLLLDATLDEENSQDGSLMLACMTSRNEITHLSL 182 ASLALADAGI+MYDLV++VS++ F +++D T DEE QDGSLM+A M +R EIT L+L Sbjct: 162 ASLALADAGIMMYDLVTSVSVSCFGKNIIIDPTSDEEAWQDGSLMVAYMPARKEITQLTL 221
Query: 183 SGEWPQGKLSEGLKLCLDACNKLAGLMRVTLKES 284 +GEW GK++ ++LC+DAC+KL ++R LK++ Sbjct: 222 TGEWSDGKITNAVELCMDACSKLCDILRERLKDA 255
>tr|A5BI33|A5BI33_VITVI Putative uncharacterized protein (Chromosome chr6 scaffold_3, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00024558001 PE=4 SV=1 Length = 254
Score = 110 bits (276), Expect = 3e-23 Identities = 51/97 (52%), Positives = 76/97 (78%) Frame = +3
Query: 3 ASLALADAGIVMYDLVSAVSLNSFDTKLLLDATLDEENSQDGSLMLACMTSRNEITHLSL 182 ASLALADAGI+MYDLV++VS++ L++D L+EE+ QDGSL++ CM SRNE+T L++ Sbjct: 155 ASLALADAGIMMYDLVASVSVSCLGKNLVIDPILEEESYQDGSLLITCMPSRNEVTQLTV 214
Query: 183 SGEWPQGKLSEGLKLCLDACNKLAGLMRVTLKESMGA 293 +GEW ++ E +++CL+AC+KLA ++R LKE+ A Sbjct: 215 NGEWSTPRVHEAMQICLEACSKLAKIIRSCLKETASA 251
>tr|A2XNZ0|A2XNZ0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_14290 PE=4 SV=1 Length = 260
Score = 110 bits (275), Expect = 4e-23 Identities = 52/94 (55%), Positives = 74/94 (78%) Frame = +3
Query: 3 ASLALADAGIVMYDLVSAVSLNSFDTKLLLDATLDEENSQDGSLMLACMTSRNEITHLSL 182 ASLALADAGI+MYDLV++VS++ F +++D T DEE QDGSLM+A M +R EIT L+L Sbjct: 162 ASLALADAGIMMYDLVTSVSVSCFGKNIIIDPTSDEEAWQDGSLMVAYMPARKEITQLTL 221
Query: 183 SGEWPQGKLSEGLKLCLDACNKLAGLMRVTLKES 284 +GEW GK++ ++LC+DAC+KL ++R LK++ Sbjct: 222 TGEWSDGKITNAVELCMDACSKLCDILREHLKDA 255
>tr|Q69UI6|Q69UI6_ORYSJ Os08g0116800 protein OS=Oryza sativa subsp. japonica GN=P0470F10.13 PE=2 SV=1 Length = 262
Score = 108 bits (270), Expect = 1e-22 Identities = 50/94 (53%), Positives = 74/94 (78%) Frame = +3
Query: 3 ASLALADAGIVMYDLVSAVSLNSFDTKLLLDATLDEENSQDGSLMLACMTSRNEITHLSL 182 ASLALADAGI++YDLV++VS++ F +++D T DEE QDGS+M+A M +R EIT L+L Sbjct: 164 ASLALADAGIMIYDLVTSVSVSCFGKNIIIDPTSDEEAWQDGSIMVAYMPARKEITQLTL 223
Query: 183 SGEWPQGKLSEGLKLCLDACNKLAGLMRVTLKES 284 +GEW GK++ ++LC+DAC+KL ++R LK++ Sbjct: 224 TGEWSDGKITNAVELCMDACSKLCDILRERLKDA 257
>tr|A2YQN5|A2YQN5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_27604 PE=4 SV=1 Length = 262
Score = 108 bits (270), Expect = 1e-22 Identities = 50/94 (53%), Positives = 74/94 (78%) Frame = +3
Query: 3 ASLALADAGIVMYDLVSAVSLNSFDTKLLLDATLDEENSQDGSLMLACMTSRNEITHLSL 182 ASLALADAGI++YDLV++VS++ F +++D T DEE QDGS+M+A M +R EIT L+L Sbjct: 164 ASLALADAGIMIYDLVTSVSVSCFGKNIIIDPTSDEEAWQDGSIMVAYMPARKEITQLTL 223
Query: 183 SGEWPQGKLSEGLKLCLDACNKLAGLMRVTLKES 284 +GEW GK++ ++LC+DAC+KL ++R LK++ Sbjct: 224 TGEWSDGKITNAVELCMDACSKLCDILRERLKDA 257
>tr|Q9SZS4|Q9SZS4_ARATH Putative uncharacterized protein F27G19.90 (Putative uncharacterized protein AT4g27490) OS=Arabidopsis thaliana GN=F27G19.90 PE=2 SV=1 Length = 244
Score = 105 bits (261), Expect = 2e-21 Identities = 50/97 (51%), Positives = 70/97 (72%) Frame = +3
Query: 3 ASLALADAGIVMYDLVSAVSLNSFDTKLLLDATLDEENSQDGSLMLACMTSRNEITHLSL 182 ASLALADAGI+MYDL++AVS++ L++D +EE +DGS M+ CM SR EIT L++ Sbjct: 145 ASLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMPSRYEITQLTI 204
Query: 183 SGEWPQGKLSEGLKLCLDACNKLAGLMRVTLKESMGA 293 +GEW ++E ++LCLDA +KL +MR LK+S A Sbjct: 205 TGEWTTPNINEAMQLCLDASSKLGEIMRDCLKQSASA 241
>tr|Q8GWJ0|Q8GWJ0_ARATH Putative uncharacterized protein At4g27490/F27G19_90 OS=Arabidopsis thaliana GN=At4g27490/F27G19_90 PE=2 SV=1 Length = 140
Score = 105 bits (261), Expect = 2e-21 Identities = 50/97 (51%), Positives = 70/97 (72%) Frame = +3
Query: 3 ASLALADAGIVMYDLVSAVSLNSFDTKLLLDATLDEENSQDGSLMLACMTSRNEITHLSL 182 ASLALADAGI+MYDL++AVS++ L++D +EE +DGS M+ CM SR EIT L++ Sbjct: 41 ASLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMPSRYEITQLTI 100
Query: 183 SGEWPQGKLSEGLKLCLDACNKLAGLMRVTLKESMGA 293 +GEW ++E ++LCLDA +KL +MR LK+S A Sbjct: 101 TGEWTTPNINEAMQLCLDASSKLGEIMRDCLKQSASA 137
>tr|A2RVK7|A2RVK7_ARATH At4g27490 OS=Arabidopsis thaliana PE=2 SV=1 Length = 256
Score = 105 bits (261), Expect = 2e-21 Identities = 50/97 (51%), Positives = 70/97 (72%) Frame = +3
Query: 3 ASLALADAGIVMYDLVSAVSLNSFDTKLLLDATLDEENSQDGSLMLACMTSRNEITHLSL 182 ASLALADAGI+MYDL++AVS++ L++D +EE +DGS M+ CM SR EIT L++ Sbjct: 157 ASLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMPSRYEITQLTI 216
Query: 183 SGEWPQGKLSEGLKLCLDACNKLAGLMRVTLKESMGA 293 +GEW ++E ++LCLDA +KL +MR LK+S A Sbjct: 217 TGEWTTPNINEAMQLCLDASSKLGEIMRDCLKQSASA 253
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