BP916173
Clone id YMU001_000084_B08
Library
Length 492
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000084_B08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ATGGGATGCATTACACTTGTTACATGATGCTTCAATTGGCTCTCAAGTGAATGAAGCTTT
TCTACAACGCCAATGTATTACGGCTTGGGAGAAATCCGGTGGGTCACGCTTCATACATTA
CACCACCTATATTGCCCCCAACGACAAAACCATGTTCTTCGCTGAGAGAGGAAACCGTAC
TCACACTTACATGCTTGAGCCTATTCCCTTGTCCGCGATACGCACTATCGCAGCAATTCG
GCTTAGCTCCCATTTCCTTCGATTCGAGATAGGGCGTCGGGGCAATGGAGAAGAGTCAAA
TCGATTGTGCACATTATGCTCACTGCAAGTTCGAGAGTCTGAGTACCACACACTACTAGA
GTGCTCAGCTTTTGATCACATCTGAACTTGCTTCTCTCACATTTTCAGCCATAACTTAGA
CCTACACACTTTCCTCTCCCAGCCAAAGTGTGGGCTCTCCATTGCGACTCTCATCACTAC
AATTTTGGAGCA
■■Homology search results ■■ -
sp_hit_id P53882
Definition sp|P53882|YNR6_YEAST Uncharacterized protein YNL176C OS=Saccharomyces cerevisiae
Align length 106
Score (bit) 32.7
E-value 0.92
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916173|Adiantum capillus-veneris mRNA, clone:
YMU001_000084_B08.
(492 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P53882|YNR6_YEAST Uncharacterized protein YNL176C OS=Saccharo... 33 0.92
sp|A5DSF0|YME2_LODEL Mitochondrial escape protein 2 OS=Lodderomy... 31 3.5
sp|Q9LIE4|ZDHC8_ARATH Probable S-acyltransferase At3g22180 OS=Ar... 30 4.5
sp|Q925N6|IGSF1_RAT Immunoglobulin superfamily member 1 OS=Rattu... 30 7.8

>sp|P53882|YNR6_YEAST Uncharacterized protein YNL176C
OS=Saccharomyces cerevisiae GN=YNL176C PE=1 SV=1
Length = 636

Score = 32.7 bits (73), Expect = 0.92
Identities = 31/106 (29%), Positives = 51/106 (48%)
Frame = +3

Query: 174 TVLTLTCLSLFPCPRYALSQQFGLAPISFDSR*GVGAMEKSQIDCAHYAHCKFESLSTTH 353
++L + LSL Y+ ++ F SFDSR + + + Y + S+S T
Sbjct: 169 SLLVSSSLSLSLSSSYSDTKLF-----SFDSRSSIFSPSTPTVISPSYTY--LSSISATS 221

Query: 354 Y*SAQLLITSELASLTFSAIT*TYTLSSPSQSVGSPLRLSSLQFWS 491
+ Q+ TSEL+S FS I+ T+S+ + S R +S F+S
Sbjct: 222 F---QISTTSELSSSWFSTISSPSTISNKDTTCPSSSRNTSTSFYS 264


>sp|A5DSF0|YME2_LODEL Mitochondrial escape protein 2 OS=Lodderomyces
elongisporus GN=YME2 PE=3 SV=1
Length = 862

Score = 30.8 bits (68), Expect = 3.5
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = +2

Query: 47 VNEAFLQRQCITAWEKSGGSRFIHYTTYIAPNDKTMFFAERGNRTHTYMLEPIPLSAIRT 226
V A + CIT + +GG IH P KT F E + +HT + PI L+ + T
Sbjct: 238 VRAAICAKHCITGMQLNGGKTTIH--IQYVPVKKTNFIIEMIS-SHTKIALPIILALLAT 294

Query: 227 IAAI 238
A +
Sbjct: 295 FAVL 298


>sp|Q9LIE4|ZDHC8_ARATH Probable S-acyltransferase At3g22180
OS=Arabidopsis thaliana GN=At3g22180 PE=1 SV=2
Length = 706

Score = 30.4 bits (67), Expect = 4.5
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +2

Query: 278 RGNGEESNRLCTLCSLQVRESEYHTLLECSAFDHI*TCFSH 400
+GN EE+ CTLC+ +VR+ H C + D CF H
Sbjct: 165 QGNSEEA-LFCTLCNCEVRKFSKH----CRSCDKCVDCFDH 200


>sp|Q925N6|IGSF1_RAT Immunoglobulin superfamily member 1 OS=Rattus
norvegicus GN=Igsf1 PE=2 SV=1
Length = 1320

Score = 29.6 bits (65), Expect = 7.8
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 9/55 (16%)
Frame = +3

Query: 180 LTLTCLSLFPCPRYALSQQFGLAPISFDSR*G---------VGAMEKSQIDCAHY 317
+TL C +F R+AL Q+ AP+ F S G VGA + C +Y
Sbjct: 875 VTLRCQGIFQGMRFALLQEGAHAPLQFQSASGTSVDFLLHTVGAEDFGNYSCVYY 929


tr_hit_id A0KJC8
Definition tr|A0KJC8|A0KJC8_AERHH ImcF family protein OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240)
Align length 45
Score (bit) 33.1
E-value 7.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916173|Adiantum capillus-veneris mRNA, clone:
YMU001_000084_B08.
(492 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A0KJC8|A0KJC8_AERHH ImcF family protein OS=Aeromonas hydrophi... 33 7.1
tr|Q0PZG0|Q0PZG0_AERHY VasK OS=Aeromonas hydrophila GN=vasK PE=4... 33 7.1
tr|B4J167|B4J167_DROGR GH17153 OS=Drosophila grimshawi GN=GH1715... 33 9.3

>tr|A0KJC8|A0KJC8_AERHH ImcF family protein OS=Aeromonas hydrophila
subsp. hydrophila (strain ATCC 7966 / NCIB 9240)
GN=AHA_1845 PE=4 SV=1
Length = 1161

Score = 33.1 bits (74), Expect = 7.1
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2

Query: 146 KTMFFAERGNRTHTYMLEPIPLSAIRTIAAIRLSSHFLRFEIGRR 280
+ +FF+++GN + LEPI L+A + + + L L + GRR
Sbjct: 1020 RQIFFSQQGNLEVQFALEPIELTANKRRSVLNLDGQLLEYAHGRR 1064


>tr|Q0PZG0|Q0PZG0_AERHY VasK OS=Aeromonas hydrophila GN=vasK PE=4 SV=1
Length = 1161

Score = 33.1 bits (74), Expect = 7.1
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2

Query: 146 KTMFFAERGNRTHTYMLEPIPLSAIRTIAAIRLSSHFLRFEIGRR 280
+ +FF+++GN + LEPI L+A + + + L L + GRR
Sbjct: 1020 RQIFFSQQGNLEVQFALEPIELTANKRRSVLNLDGQLLEYAHGRR 1064


>tr|B4J167|B4J167_DROGR GH17153 OS=Drosophila grimshawi GN=GH17153
PE=4 SV=1
Length = 322

Score = 32.7 bits (73), Expect = 9.3
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 7/96 (7%)
Frame = +3

Query: 204 FPCPR-YALSQQFGLAPISFDSR*GV-----GAMEKSQI-DCAHYAHCKFESLSTTHY*S 362
+PCP Y +Q G PI R G ++++ QI A AH F LS HY +
Sbjct: 70 YPCPSSYNTTQYLGSRPIPLRGRGGAPTSHGASLQQLQIVPSAIDAHAPFAQLSHIHYMT 129

Query: 363 AQLLITSELASLTFSAIT*TYTLSSPSQSVGSPLRL 470
L T+ A+ + +A + T T + S +RL
Sbjct: 130 NNPLTTASSAASSAAAASTTATTTPRSHHSQQDMRL 165