BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916174|Adiantum capillus-veneris mRNA, clone:
YMU001_000084_B10.
         (434 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O69582|COX3_MYCLE Probable cytochrome c oxidase subunit 3 OS=...    31   2.5  
sp|P72667|RSME_SYNY3 Ribosomal RNA small subunit methyltransfera...    30   5.6  
sp|Q73YM3|COX3_MYCPA Probable cytochrome c oxidase subunit 3 OS=...    29   7.3  
sp|Q8BM55|TM214_MOUSE Transmembrane protein 214 OS=Mus musculus ...    29   9.6  
sp|Q8LPK5|CESA8_ARATH Cellulose synthase A catalytic subunit 8 [...    29   9.6  

>sp|O69582|COX3_MYCLE Probable cytochrome c oxidase subunit 3
           OS=Mycobacterium leprae GN=ctaE PE=3 SV=1
          Length = 202

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = +2

Query: 140 VPFLLSLARATFSKWTSFYIAPCQIQCSALLRILWHPLVVSWCGQFPPLSHLR 298
           + F+  LAR T SK+T     P Q   S ++   WH + + W   F  +  +R
Sbjct: 155 IAFIFLLARTTMSKFT-----PAQATASIVVSYYWHFVDIVWIALFTVIYFIR 202


>sp|P72667|RSME_SYNY3 Ribosomal RNA small subunit methyltransferase
           E OS=Synechocystis sp. (strain PCC 6803) GN=rsmE PE=3
           SV=1
          Length = 303

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +3

Query: 270 VNFLLSPIFVIHNSLPSVFSLPI 338
           V F+LSPI V  N  PS+ SLP+
Sbjct: 32  VQFVLSPILVSTNLTPSILSLPV 54


>sp|Q73YM3|COX3_MYCPA Probable cytochrome c oxidase subunit 3
           OS=Mycobacterium paratuberculosis GN=ctaE PE=3 SV=1
          Length = 203

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 16/53 (30%), Positives = 24/53 (45%)
 Frame = +2

Query: 140 VPFLLSLARATFSKWTSFYIAPCQIQCSALLRILWHPLVVSWCGQFPPLSHLR 298
           V F+  LAR   SK+T     P Q   S ++   WH + + W   F  +  +R
Sbjct: 156 VAFIFLLARTAMSKFT-----PAQATASIVVSYYWHFVDIVWIALFTVIYFIR 203


>sp|Q8BM55|TM214_MOUSE Transmembrane protein 214 OS=Mus musculus
           GN=Tmem214 PE=2 SV=1
          Length = 687

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = -1

Query: 140 LQEDSGGGSRTTTLETSCRNLVERVKG 60
           L++ SGG     T +T+C+ L++R +G
Sbjct: 451 LKKGSGGSEHVLTCDTACKGLLQRARG 477


>sp|Q8LPK5|CESA8_ARATH Cellulose synthase A catalytic subunit 8
           [UDP-forming] OS=Arabidopsis thaliana GN=CESA8 PE=1 SV=1
          Length = 985

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 11/35 (31%), Positives = 22/35 (62%)
 Frame = -2

Query: 112 GQQLWKPHVETW*SESRAERQANKYKPNPKNTRRQ 8
           G  +WK  VE+W  + + ++++ K K +PK T+ +
Sbjct: 110 GNPIWKNRVESW--KDKKDKKSKKKKKDPKATKAE 142

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916174|Adiantum capillus-veneris mRNA, clone:
YMU001_000084_B10.
         (434 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******