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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916175
Clone id YMU001_000084_B11
Library
Length 332
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000084_B11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TGTTTCTTGGATTGTGGCTTCAAGGTTAATACGAATAAATAGTCACCCTTTTAAAAATCC
TTCTTTATGACGTTTGAGAGGGGGAATGTGGGAACACACCCGGTGGGAACACACCCGGCA
CAACAAAGGCCTCTCTATAGCTCACAGTATCCACATCCCCCCTATCCTCTTAGAAAACAC
CTTCAAAAACACACTTTACACTAGCAGACCACCGNCTACTCTTTTCCCAATGCCTACACA
CTCCACAAGTCCACCATACCATGCACACCTACTGTCACATTCCCTCTCCACCCTTACACA
TGCACACAGCCTCTCAATCTCACTCTCTCACA
■■Homology search results ■■ -
sp_hit_id Q09690
Definition sp|Q09690|POM1_SCHPO Dual specificity protein kinase pom1 OS=Schizosaccharomyces pombe
Align length 30
Score (bit) 32.0
E-value 0.99
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916175|Adiantum capillus-veneris mRNA, clone:
YMU001_000084_B11.
         (332 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q09690|POM1_SCHPO Dual specificity protein kinase pom1 OS=Sch...    32   0.99 
sp|P38898|YH17_YEAST Putative uncharacterized protein YHR217C OS...    31   1.7  
sp|O35601|FYB_MOUSE FYN-binding protein OS=Mus musculus GN=Fyb P...    30   2.9  
sp|Q9JKS6|PCLO_RAT Protein piccolo OS=Rattus norvegicus GN=Pclo ...    29   6.4  
sp|O00570|SOX1_HUMAN SOX-1 protein OS=Homo sapiens GN=SOX1 PE=2 ...    29   8.4  
sp|Q4VGL6|RC3H1_MOUSE Roquin OS=Mus musculus GN=Rc3h1 PE=1 SV=1        29   8.4  
sp|Q8IZD9|DOCK3_HUMAN Dedicator of cytokinesis protein 3 OS=Homo...    29   8.4  
sp|Q9QWK5|BIR1A_MOUSE Baculoviral IAP repeat-containing protein ...    29   8.4  

>sp|Q09690|POM1_SCHPO Dual specificity protein kinase pom1
           OS=Schizosaccharomyces pombe GN=pom1 PE=1 SV=1
          Length = 1087

 Score = 32.0 bits (71), Expect = 0.99
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +2

Query: 77  RGGMWEHTRWEHTRHNKGLSIAHSIHIPPI 166
           R G W HT +  T H +  SI +   IPP+
Sbjct: 242 RSGSWRHTNFHSTSHPRAASIGNKSGIPPV 271


>sp|P38898|YH17_YEAST Putative uncharacterized protein YHR217C
           OS=Saccharomyces cerevisiae GN=YHR217C PE=5 SV=1
          Length = 153

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
 Frame = +1

Query: 136 YSSQYPHPPYPL---RKHLQKHTLH*QTTXYSFPNAYTLHKSTIPCTPTVTFPLHPYTCT 306
           YS  Y H P+P      H   HT     T    P+ +T H  T P TPT      P+T  
Sbjct: 14  YSDIYIHTPHPHPHPHPHTPTHTHPHTPTPTPHPHPHTPHPHTTP-TPTPHHTHTPHTTL 72

Query: 307 QPLNLTL 327
             L+L L
Sbjct: 73  SNLSLNL 79


>sp|O35601|FYB_MOUSE FYN-binding protein OS=Mus musculus GN=Fyb PE=1
           SV=2
          Length = 819

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = +1

Query: 100 PVGTHPAQQRPLYSSQYPHPPYP 168
           P  THPA Q PL +S   HPP P
Sbjct: 383 PPPTHPASQPPLPASHPAHPPVP 405


>sp|Q9JKS6|PCLO_RAT Protein piccolo OS=Rattus norvegicus GN=Pclo PE=1
            SV=1
          Length = 5085

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 7/33 (21%)
 Frame = +1

Query: 91   GTHPVGTHPAQQRPLY-------SSQYPHPPYP 168
            G+ PV THP++ RP +       S+Q P PP P
Sbjct: 2325 GSLPVSTHPSKSRPFFRSSSLDISAQPPPPPPP 2357


>sp|O00570|SOX1_HUMAN SOX-1 protein OS=Homo sapiens GN=SOX1 PE=2
           SV=2
          Length = 391

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +1

Query: 82  GNVGTHPVGTHPAQQRPLYSSQYPHPPYPLRKH 180
           G  G HP   HPA   P +   +PH P P+ ++
Sbjct: 218 GAGGAHP-HAHPAHPHPHHPHAHPHNPQPMHRY 249


>sp|Q4VGL6|RC3H1_MOUSE Roquin OS=Mus musculus GN=Rc3h1 PE=1 SV=1
          Length = 1130

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 4/30 (13%)
 Frame = +1

Query: 91  GTHPVGTHPAQQRPLYSSQYPH----PPYP 168
           G +PV  HPAQ RP Y    P+    PP P
Sbjct: 716 GYYPVAPHPAQIRPSYPRDPPYSRLPPPQP 745


>sp|Q8IZD9|DOCK3_HUMAN Dedicator of cytokinesis protein 3 OS=Homo
           sapiens GN=DOCK3 PE=1 SV=1
          Length = 2030

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +2

Query: 62  SL*RLRGGMWEHTRWEHTRHNKGLSIAHSIHIPPILLENTFKNTLY 199
           SL  LRG M +  R      N+GL+I   +  P +++    +N LY
Sbjct: 380 SLQLLRGDMEQIRRENPMIFNRGLAITRKLGFPDVIMPGDIRNDLY 425


>sp|Q9QWK5|BIR1A_MOUSE Baculoviral IAP repeat-containing protein 1a
           OS=Mus musculus GN=Naip1 PE=2 SV=2
          Length = 1403

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
 Frame = +2

Query: 137 IAHSIHI--PPILLENTFKNTLYTSRPPXT 220
           ++H +H+     LLENT+KN  Y + PP T
Sbjct: 808 VSHLLHLVDETELLENTYKNEDYVNHPPGT 837
tr_hit_id A8YBY7|A8YBY7_MICAE Similarity with the tr|Q9PFN1
Definition tr|A8YBY7|A8YBY7_MICAE Similarity with the tr|Q9PFN1|Q9PFN1 OS=Microcystis aeruginosa PCC 7806
Align length 76
Score (bit) 37.7
E-value 0.29
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916175|Adiantum capillus-veneris mRNA, clone:
YMU001_000084_B11.
         (332 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A8YBY7|A8YBY7_MICAE Similarity with the tr|Q9PFN1|Q9PFN1 OS=M...    38   0.29 
tr|B6KW54|B6KW54_TOXGO Putative uncharacterized protein OS=Toxop...    37   0.50 
tr|Q8T0B2|Q8T0B2_DROME LD14125p OS=Drosophila melanogaster GN=ni...    35   2.5  
tr|Q7KMJ6|Q7KMJ6_DROME Spenito, isoform A OS=Drosophila melanoga...    35   2.5  
tr|B4P267|B4P267_DROYA GE19164 OS=Drosophila yakuba GN=GE19164 P...    35   2.5  
tr|B6MW54|B6MW54_BRAFL Putative uncharacterized protein OS=Branc...    34   4.2  
tr|B4QF78|B4QF78_DROSI GD10528 OS=Drosophila simulans GN=GD10528...    34   4.2  
tr|B4LKR2|B4LKR2_DROVI GJ20116 OS=Drosophila virilis GN=GJ20116 ...    34   4.2  
tr|B4J7V6|B4J7V6_DROGR GH20604 OS=Drosophila grimshawi GN=GH2060...    34   4.2  
tr|B3N9B3|B3N9B3_DROER GG23320 OS=Drosophila erecta GN=GG23320 P...    34   4.2  
tr|A1CU10|A1CU10_ASPCL Putative uncharacterized protein OS=Asper...    34   4.2  
tr|Q32LT5|Q32LT5_DANRE Zgc:123299 OS=Danio rerio GN=zgc:123299 P...    33   5.5  
tr|Q99PS7|Q99PS7_RAT Histidine-rich glycoprotein 2 OS=Rattus nor...    33   5.5  
tr|Q1DZZ0|Q1DZZ0_COCIM Putative uncharacterized protein OS=Cocci...    33   5.5  
tr|Q0GPE9|Q0GPE9_SOYBN BZIP transcription factor bZIP28 OS=Glyci...    33   7.2  
tr|B4KQW7|B4KQW7_DROMO GI20446 OS=Drosophila mojavensis GN=GI204...    33   7.2  
tr|A6VPG4|A6VPG4_ACTSZ Phosphatidylglycerophosphatase OS=Actinob...    33   9.4  
tr|Q16PL9|Q16PL9_AEDAE Perlecan OS=Aedes aegypti GN=AAEL011604 P...    33   9.4  
tr|Q1DN98|Q1DN98_COCIM Putative uncharacterized protein OS=Cocci...    33   9.4  

>tr|A8YBY7|A8YBY7_MICAE Similarity with the tr|Q9PFN1|Q9PFN1
           OS=Microcystis aeruginosa PCC 7806 GN=IPF_4558 PE=4 SV=1
          Length = 146

 Score = 37.7 bits (86), Expect = 0.29
 Identities = 29/76 (38%), Positives = 32/76 (42%)
 Frame = +1

Query: 73  FERGNVGTHPVGTHPAQQRPLYSSQYPHPPYPLRKHLQKHTLH*QTTXYSFPNAYTLHKS 252
           +  G V T P   HP    P  +   PHP  P   H   HTLH  T     P  YTLH +
Sbjct: 6   YPSGIVKTTPHTPHPTPHTPHPTPYTPHPT-PYTPHPTPHTLH-PTPHTLHPTPYTLHPT 63

Query: 253 TIPCTPTVTFPLHPYT 300
             P TP  T    PYT
Sbjct: 64  --PYTPHPT----PYT 73


>tr|B6KW54|B6KW54_TOXGO Putative uncharacterized protein
           OS=Toxoplasma gondii ME49 GN=TGME49_012620 PE=4 SV=1
          Length = 194

 Score = 37.0 bits (84), Expect = 0.50
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
 Frame = +1

Query: 100 PVGTHPAQQRPLYSSQYPHPPYPLRKHLQKHTLH*QTT---XYSFPNAYTLHKSTIPCTP 270
           PV T  +Q  P  ++  PHP  P+R+   +HT     T    +S     T H ++IP TP
Sbjct: 106 PVNTLSSQHTPQNATPLPHPHSPIRR--TRHTASVFPTPVQTFSDTRRDTRHHTSIPPTP 163

Query: 271 TVTFPLHPY 297
            +T   HP+
Sbjct: 164 DITRTSHPH 172


>tr|Q8T0B2|Q8T0B2_DROME LD14125p OS=Drosophila melanogaster GN=nito
           PE=2 SV=1
          Length = 589

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 24/69 (34%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
 Frame = +1

Query: 97  HPVGTHPAQQRPLYSSQYPHPPY--PLRKHLQKHTLH*QTTXYSFPNAYTLHKSTIPCTP 270
           HP   HP   RPL+   YPHPP   PL +    H LH     ++ P+ Y       P  P
Sbjct: 26  HPHAVHPRDYRPLH-HDYPHPPRGPPLHRGGHPHHLH----GHAPPHQYA------PMRP 74

Query: 271 TVTFPLHPY 297
               P  PY
Sbjct: 75  LAPRPHAPY 83


>tr|Q7KMJ6|Q7KMJ6_DROME Spenito, isoform A OS=Drosophila
           melanogaster GN=nito PE=1 SV=1
          Length = 793

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 24/69 (34%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
 Frame = +1

Query: 97  HPVGTHPAQQRPLYSSQYPHPPY--PLRKHLQKHTLH*QTTXYSFPNAYTLHKSTIPCTP 270
           HP   HP   RPL+   YPHPP   PL +    H LH     ++ P+ Y       P  P
Sbjct: 230 HPHAVHPRDYRPLH-HDYPHPPRGPPLHRGGHPHHLH----GHAPPHQYA------PMRP 278

Query: 271 TVTFPLHPY 297
               P  PY
Sbjct: 279 LAPRPHAPY 287


>tr|B4P267|B4P267_DROYA GE19164 OS=Drosophila yakuba GN=GE19164 PE=4
           SV=1
          Length = 774

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 24/69 (34%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
 Frame = +1

Query: 97  HPVGTHPAQQRPLYSSQYPHPPY--PLRKHLQKHTLH*QTTXYSFPNAYTLHKSTIPCTP 270
           HP   HP   RPL+   YPHPP   PL +    H LH     ++ P+ Y       P  P
Sbjct: 211 HPHAVHPRDYRPLH-HDYPHPPRGPPLHRGGHPHHLH----GHAPPHQYA------PMRP 259

Query: 271 TVTFPLHPY 297
               P  PY
Sbjct: 260 LAPRPHAPY 268


>tr|B6MW54|B6MW54_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_87484 PE=4 SV=1
          Length = 471

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 16/79 (20%)
 Frame = +1

Query: 130 PLYSSQY-------PH-PPYPL---RKHLQKHTLH*QTTXYSFPNAYTLHKSTIPCTPTV 276
           PL++S+Y       PH P  PL   + ++Q +T     T       Y + +ST+P  PTV
Sbjct: 78  PLFNSEYNIQPCTAPHRPTVPLSNSKYNIQSYTAPPPPTVLLSNRKYHIQQSTVPHRPTV 137

Query: 277 -----TFPLHPYTCTQPLN 318
                 + + P TCT P N
Sbjct: 138 PLSDSEYNIQPCTCTTPSN 156


>tr|B4QF78|B4QF78_DROSI GD10528 OS=Drosophila simulans GN=GD10528
           PE=4 SV=1
          Length = 768

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
 Frame = +1

Query: 97  HPVGTHPAQQRPLYSSQYPHPPY--PLRKHLQKHTLH*QTTXYSFPNAYTLHKSTIPCTP 270
           HP   HP   RPL+   YPHPP   P+ +    H LH     ++ P+ Y       P  P
Sbjct: 211 HPHAVHPRDYRPLH-HDYPHPPRGPPMHRGGHPHHLH----GHAPPHQYA------PMRP 259

Query: 271 TVTFPLHPY 297
               P  PY
Sbjct: 260 LAPRPHAPY 268


>tr|B4LKR2|B4LKR2_DROVI GJ20116 OS=Drosophila virilis GN=GJ20116
           PE=4 SV=1
          Length = 793

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
 Frame = +1

Query: 73  FERGNVGTHPVGTHPAQQRPLYSSQYPHPPY--PLRK---HLQKHTLH 201
           ++R     HP   HP + RP++  +YPHPP   P+ +   H   H LH
Sbjct: 220 YDRYGPPIHPHAVHPREYRPMH-HEYPHPPRGPPMHRGHPHAHPHHLH 266


>tr|B4J7V6|B4J7V6_DROGR GH20604 OS=Drosophila grimshawi GN=GH20604
           PE=4 SV=1
          Length = 793

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
 Frame = +1

Query: 73  FERGNVGTHPVGTHPAQQRPLYSSQYPHPPY--PLRK---HLQKHTLH 201
           ++R     HP   HP + RP++  +YPHPP   P+ +   H   H LH
Sbjct: 220 YDRYGPPLHPHAAHPREYRPMH-HEYPHPPRGPPMHRGHPHTHPHHLH 266


>tr|B3N9B3|B3N9B3_DROER GG23320 OS=Drosophila erecta GN=GG23320 PE=4
           SV=1
          Length = 774

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
 Frame = +1

Query: 97  HPVGTHPAQQRPLYSSQYPHPPY--PLRKHLQKHTLH*QTTXYSFPNAYTLHKSTIPCTP 270
           HP   HP   RPL+   YPHPP   PL +    H +H     ++ P+ Y       P  P
Sbjct: 211 HPHAVHPRDYRPLH-HDYPHPPRGPPLHRGGHPHHIH----GHAPPHQYA------PMRP 259

Query: 271 TVTFPLHPY 297
               P  PY
Sbjct: 260 LAPRPHAPY 268