BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916178|Adiantum capillus-veneris mRNA, clone:
YMU001_000084_C02.
         (481 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q1QGE2|RS20_NITHX 30S ribosomal protein S20 OS=Nitrobacter ha...    31   3.3  
sp|Q9I2Q2|METH_PSEAE Methionine synthase OS=Pseudomonas aerugino...    30   5.6  
sp|Q3SMV1|RS20_NITWN 30S ribosomal protein S20 OS=Nitrobacter wi...    30   7.4  
sp|Q9ZEM5|LIFO2_BURCE Lipase chaperone OS=Burkholderia cepacia G...    29   9.6  

>sp|Q1QGE2|RS20_NITHX 30S ribosomal protein S20 OS=Nitrobacter
           hamburgensis (strain X14 / DSM 10229) GN=rpsT PE=3 SV=1
          Length = 88

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 17/30 (56%), Positives = 22/30 (73%), Gaps = 2/30 (6%)
 Frame = -3

Query: 251 MQGSLRVVESAIA--DRDATIFALRHALQE 168
           M+GS+R+VE AIA  DRDA I A++ A  E
Sbjct: 28  MRGSVRIVEEAIAKGDRDAAIQAMKRAEPE 57


>sp|Q9I2Q2|METH_PSEAE Methionine synthase OS=Pseudomonas aeruginosa
           GN=metH PE=3 SV=1
          Length = 1234

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = -3

Query: 230 VESAIADRDATIFALRHALQEKSKIIDG 147
           + S + DR A + AL+HAL+E+  I+DG
Sbjct: 1   MSSPLTDRSARLQALQHALRERILILDG 28


>sp|Q3SMV1|RS20_NITWN 30S ribosomal protein S20 OS=Nitrobacter
           winogradskyi (strain Nb-255 / ATCC 25391) GN=rpsT PE=3
           SV=1
          Length = 88

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 16/30 (53%), Positives = 22/30 (73%), Gaps = 2/30 (6%)
 Frame = -3

Query: 251 MQGSLRVVESAIA--DRDATIFALRHALQE 168
           M+G++R+VE AIA  DRDA I A++ A  E
Sbjct: 28  MRGTVRIVEEAIAKGDRDAAIQAMKRAEPE 57


>sp|Q9ZEM5|LIFO2_BURCE Lipase chaperone OS=Burkholderia cepacia
           GN=lifO PE=3 SV=1
          Length = 344

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 9/93 (9%)
 Frame = -3

Query: 362 IKERGEEQESRQVIATIELGAELSA---------ATHQCHSATYATMQGSLRVVESAIAD 210
           +++ G   ++ +   T  LG E +A         A+ Q   A YAT +  +     +  D
Sbjct: 252 LQKSGATPDAMRAQLTQTLGPEAAARVAQMQQDDASWQSRYADYATQRAEIESAGLSPQD 311

Query: 209 RDATIFALRHALQEKSKIIDGPQSLDAGTSGSA 111
           RDA I ALR     K        SLD G +GSA
Sbjct: 312 RDAQIAALRQRTFTKPGEAVRAASLDRG-AGSA 343

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916178|Adiantum capillus-veneris mRNA, clone:
YMU001_000084_C02.
         (481 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A4RVV7|A4RVV7_OSTLU Predicted protein OS=Ostreococcus lucimar...    35   2.4  
tr|B5J7V0|B5J7V0_9RHOB Site-specific recombinase, phage integras...    34   4.1  
tr|Q6ES34|Q6ES34_ORYSJ Os09g0413600 protein OS=Oryza sativa subs...    33   9.2  
tr|A8IEW8|A8IEW8_CHLRE Predicted protein (Fragment) OS=Chlamydom...    33   9.2  
tr|B7P812|B7P812_IXOSC Angiomotin, putative OS=Ixodes scapularis...    33   9.2  

>tr|A4RVV7|A4RVV7_OSTLU Predicted protein OS=Ostreococcus lucimarinus
            (strain CCE9901) GN=OSTLU_31113 PE=4 SV=1
          Length = 1345

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 23/79 (29%), Positives = 40/79 (50%)
 Frame = -3

Query: 359  KERGEEQESRQVIATIELGAELSAATHQCHSATYATMQGSLRVVESAIADRDATIFALRH 180
            K +  EQ     +AT EL AEL++   +  + + A  Q     V  A ++ +A + + R 
Sbjct: 775  KSKALEQAQASSVATSELEAELASTRSELEAKSKALEQAQASSV--ATSELEAELASTRS 832

Query: 179  ALQEKSKIIDGPQSLDAGT 123
             L+ KSK ++  Q+L + T
Sbjct: 833  ELEAKSKALEQAQALSSET 851



 Score = 34.3 bits (77), Expect = 3.2
 Identities = 23/80 (28%), Positives = 39/80 (48%)
 Frame = -3

Query: 359 KERGEEQESRQVIATIELGAELSAATHQCHSATYATMQGSLRVVESAIADRDATIFALRH 180
           K +  EQ     +AT EL AEL++   +  + + A  Q     V  A ++ +A + + R 
Sbjct: 403 KSKALEQAQASSVATSELEAELASTRSELEAKSKALEQAQASSV--ATSELEAELASTRS 460

Query: 179 ALQEKSKIIDGPQSLDAGTS 120
            L+ KSK ++  Q+    TS
Sbjct: 461 ELEAKSKALEQAQASSVATS 480



 Score = 34.3 bits (77), Expect = 3.2
 Identities = 23/80 (28%), Positives = 39/80 (48%)
 Frame = -3

Query: 359 KERGEEQESRQVIATIELGAELSAATHQCHSATYATMQGSLRVVESAIADRDATIFALRH 180
           K +  EQ     +AT EL AEL++   +  + + A  Q     V  A ++ +A + + R 
Sbjct: 527 KSKALEQAQASSVATSELEAELASTRSELEAKSKALEQAQASSV--ATSELEAELASTRS 584

Query: 179 ALQEKSKIIDGPQSLDAGTS 120
            L+ KSK ++  Q+    TS
Sbjct: 585 ELEAKSKALEQAQASSVATS 604



 Score = 34.3 bits (77), Expect = 3.2
 Identities = 23/80 (28%), Positives = 39/80 (48%)
 Frame = -3

Query: 359 KERGEEQESRQVIATIELGAELSAATHQCHSATYATMQGSLRVVESAIADRDATIFALRH 180
           K +  EQ     +AT EL AEL++   +  + + A  Q     V  A ++ +A + + R 
Sbjct: 713 KSKALEQAQASSVATSELEAELASTRSELEAKSKALEQAQASSV--ATSELEAELASTRS 770

Query: 179 ALQEKSKIIDGPQSLDAGTS 120
            L+ KSK ++  Q+    TS
Sbjct: 771 ELEAKSKALEQAQASSVATS 790


>tr|B5J7V0|B5J7V0_9RHOB Site-specific recombinase, phage integrase
           family protein OS=Octadecabacter antarcticus 307
           GN=OA307_1642 PE=4 SV=1
          Length = 448

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = -2

Query: 129 RDFRKCYSMMISDFRLL*VGDMVGQGKRYRYKLLLGMHS 13
           RD+R  +S  +SD+  L +G + GQ    RY  LLG HS
Sbjct: 145 RDYRVTFSSCLSDWEHLPLGQLNGQMVATRYSKLLGQHS 183


>tr|Q6ES34|Q6ES34_ORYSJ Os09g0413600 protein OS=Oryza sativa subsp.
           japonica GN=P0643D11.22-1 PE=4 SV=1
          Length = 1136

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 9/83 (10%)
 Frame = -3

Query: 368 VVIKERGEEQESRQVIATIELGAELSAATHQCHSATYATMQG--------SLRVVESAIA 213
           VV++E  EE++SR+V+        + + TH     T    +G        ++RV ES + 
Sbjct: 194 VVMEEEEEEEQSREVVEAAAAAPMIVSTTHNYRFLTERDFRGFVKEPEAITVRVQESFVP 253

Query: 212 DRDATIFALRHALQ-EKSKIIDG 147
             +    A+  A Q E+ +++DG
Sbjct: 254 SPELEAVAVAAAAQPEERRVVDG 276


>tr|A8IEW8|A8IEW8_CHLRE Predicted protein (Fragment)
           OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_143981 PE=4
           SV=1
          Length = 290

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
 Frame = -3

Query: 353 RGEEQESRQVIATIE---LGAELSAATHQCHSATYATMQGSLRVVESAIADRDATIFALR 183
           R  E E + +I  +E   LGA  +A +H   SA  A M+   + + S  +DRD  + +LR
Sbjct: 51  RATESERQLLIVQVERLELGARRAAESHS--SALSAEMERRDQELGSIRSDRDEQVGSLR 108

Query: 182 HALQEKSKIIDGPQS 138
             L E ++ +DG ++
Sbjct: 109 RRLGETAEQLDGARA 123


>tr|B7P812|B7P812_IXOSC Angiomotin, putative OS=Ixodes scapularis
           GN=IscW_ISCW016798 PE=4 SV=1
          Length = 535

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
 Frame = -3

Query: 341 QESRQVIATIELGA-----ELSAATHQCHSATYATMQGSLRVVESAIADRDATIFALRHA 177
           QES ++IA +         +L AA  +C     A  +G L+ +ES +A++DA I  L+  
Sbjct: 361 QESEKLIAQVRSEKLKQMDDLYAAQRKC-----AEQEGKLKDLESRLAEKDAMIRVLQQH 415

Query: 176 LQEKSKII 153
            QEK  ++
Sbjct: 416 SQEKDAVL 423