| BP916181 |
| Clone id |
YMU001_000084_C05 |
| Library |
YMU01 |
| Length |
560 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000084_C05. |
| Accession |
BP916181 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
- |
| Sequence |
GAAGGAAGAACATTCGAATGGAGTGGCAGACAAAGAACCGAAGGGAACTGTTGAGGCTCC
AACCAAGTTTCTTGATTCGACAGAATTGTCAAGCGTACAAACAGGGGATGATGCGTCTAC
AAACCAGAATGAGTTGGGTTCTCACCCGGAAGATGGTGAAAAGGAAAACCTGGGGTCTGG
AAAATTTACGTCTGTTGTGGTGTTAGTGGACCCACCCAGAAGTGGGTTGCATCCTGTGGC
GCTAAAACTGCTTAGAACACATGAGAGGATTCACAGATTAGTGTACGTGTCATGCAATCC
AGACACTCTTCTAGCTAATGCTGTGGAGCTCTGCACACCAAGTGGAACAGGGGATCCTGG
AAAAGGAGCAGGGCAAAGGGGGGGACCCTGGAGGAGGAGTGCGGTGGGGCTTGCTCGACA
GCGTGTCAAGTCGATGCCCACGTCCAGTCCTTTCTCACCAGTTAAAGCTGTGGCTGTTGA
CATGTTTCCACGCACTCCTCACTGTGAGATGATAATGCTGATGGAAAGATGACATTTTAT
TGTGCAGGAGCTGTTCTATG |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q8IZ69 |
| Definition |
sp|Q8IZ69|TRM2A_HUMAN tRNA (uracil-5-)-methyltransferase homolog A OS=Homo sapiens |
| Align length |
113 |
| Score (bit) |
85.1 |
| E-value |
2.0e-16 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A7NZI6 |
| Definition |
tr|A7NZI6|A7NZI6_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera |
| Align length |
150 |
| Score (bit) |
154.0 |
| E-value |
3.0e-36 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916181|Adiantum capillus-veneris mRNA, clone:
YMU001_000084_C05.
(560 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A7NZI6|A7NZI6_VITVI Chromosome chr6 scaffold_3, whole genome ... 154 3e-36
tr|Q7XXI8|Q7XXI8_ORYSJ OSJNBa0094O15.14 protein OS=Oryza sativa ... 149 8e-35
tr|B8AU79|B8AU79_ORYSI Putative uncharacterized protein OS=Oryza... 149 8e-35
tr|Q9SKM5|Q9SKM5_ARATH Putative RNA methyltransferase OS=Arabido... 148 2e-34
tr|Q8L7S3|Q8L7S3_ARATH At2g28450/T1B3.3 OS=Arabidopsis thaliana ... 148 2e-34
tr|A9T094|A9T094_PHYPA Predicted protein OS=Physcomitrella paten... 148 2e-34
tr|Q01G39|Q01G39_OSTTA tRNA uracil-5-methyltransferase and relat... 93 9e-18
tr|A4RRI9|A4RRI9_OSTLU Predicted protein OS=Ostreococcus lucimar... 92 1e-17
tr|Q5XIQ6|Q5XIQ6_RAT HpaII tinys locus 9c OS=Rattus norvegicus G... 87 8e-16
tr|Q3UYU2|Q3UYU2_MOUSE Putative uncharacterized protein OS=Mus m... 87 8e-16
tr|Q3UJM1|Q3UJM1_MOUSE Putative uncharacterized protein OS=Mus m... 87 8e-16
tr|Q05BM5|Q05BM5_MOUSE HpaII tinys locus 9c OS=Mus musculus GN=T... 87 8e-16
tr|B5MCP2|B5MCP2_HUMAN Putative uncharacterized protein TRMT2A O... 85 2e-15
tr|B5MC50|B5MC50_HUMAN Putative uncharacterized protein TRMT2A (... 85 2e-15
tr|B6KHN4|B6KHN4_TOXGO Putative uncharacterized protein OS=Toxop... 82 2e-14
tr|B7PPI6|B7PPI6_IXOSC tRNA uracil-5-methyltransferase, putative... 82 3e-14
tr|A5PKN1|A5PKN1_XENLA LOC100101284 protein OS=Xenopus laevis GN... 80 6e-14
tr|A7RLV9|A7RLV9_NEMVE Predicted protein OS=Nematostella vectens... 80 6e-14
tr|B1H336|B1H336_XENTR LOC100145545 protein OS=Xenopus tropicali... 79 1e-13
tr|B4LD33|B4LD33_DROVI GJ13518 OS=Drosophila virilis GN=GJ13518 ... 77 6e-13
tr|B3NDW6|B3NDW6_DROER GG13433 OS=Drosophila erecta GN=GG13433 P... 77 6e-13
tr|Q9VVV7|Q9VVV7_DROME CG3808 OS=Drosophila melanogaster GN=CG38... 77 8e-13
tr|Q95R49|Q95R49_DROME SD08036p OS=Drosophila melanogaster GN=CG... 77 8e-13
tr|Q29DJ3|Q29DJ3_DROPS GA17699 OS=Drosophila pseudoobscura pseud... 77 8e-13
tr|B5RIS0|B5RIS0_DROME FI05218p (Fragment) OS=Drosophila melanog... 77 8e-13
tr|B4IFY7|B4IFY7_DROSE GM14902 OS=Drosophila sechellia GN=GM1490... 77 8e-13
tr|B4H6T5|B4H6T5_DROPE GL21973 OS=Drosophila persimilis GN=GL219... 77 8e-13
tr|B4PH07|B4PH07_DROYA GE22531 OS=Drosophila yakuba GN=GE22531 P... 76 1e-12
tr|B4IU84|B4IU84_DROYA GE22791 OS=Drosophila yakuba GN=GE22791 P... 76 1e-12
tr|B3M7Q0|B3M7Q0_DROAN GF10790 OS=Drosophila ananassae GN=GF1079... 76 1e-12
>tr|A7NZI6|A7NZI6_VITVI Chromosome chr6 scaffold_3, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00024526001
PE=4 SV=1
Length = 815
Score = 154 bits (389), Expect = 3e-36
Identities = 79/150 (52%), Positives = 99/150 (66%), Gaps = 1/150 (0%)
Frame = +2
Query: 83 ELSSVQTGDDASTNQNELGSHPEDGEKENLGSGKFTSVVVLVDPPRSGLHPVALKLLRTH 262
E SS + S N+ G +DG N+ +F + V +VDPPR GLHP+ +K LRTH
Sbjct: 671 EGSSSHELESESKNELHNGCSSKDG---NISVRQFKNFVAIVDPPRGGLHPIVIKALRTH 727
Query: 263 ERIHRLVYVSCNPDTLLANAVELCTPSGTGDPGKGAGQRGGPWRR-SAVGLARQRVKSMP 439
+ RLVY+SCNP++L+ANA+ELCTPS RG WR S+ GLAR R KSMP
Sbjct: 728 ACLRRLVYISCNPESLVANAIELCTPSADKTEKGNKNNRG--WRNMSSAGLARHRAKSMP 785
Query: 440 TSSPFSPVKAVAVDMFPRTPHCEMIMLMER 529
S PF PVKA+AVD+FP TPHCEM+ML+ER
Sbjct: 786 NSEPFQPVKAMAVDLFPHTPHCEMVMLLER 815
>tr|Q7XXI8|Q7XXI8_ORYSJ OSJNBa0094O15.14 protein OS=Oryza sativa
subsp. japonica GN=OSJNBa0094O15.14 PE=4 SV=2
Length = 865
Score = 149 bits (377), Expect = 8e-35
Identities = 79/153 (51%), Positives = 100/153 (65%), Gaps = 1/153 (0%)
Frame = +2
Query: 74 DSTELSSVQTGDDASTNQNELGSHPEDGEKENLGSGKFTSVVVLVDPPRSGLHPVALKLL 253
+S +L +D T+ + GS + + + +F +V +VDPPR GLHP +K L
Sbjct: 718 ESVDLKVSDCLEDRKTSDD--GSSISNNDVTAATACQFEDIVAIVDPPRVGLHPTVIKAL 775
Query: 254 RTHERIHRLVYVSCNPDTLLANAVELCTPSGTGDPGKGAGQRGGPWR-RSAVGLARQRVK 430
RTH RI RLVY+SCNPD+L+ANA+ELCTPS K G RG WR S+ GLARQR K
Sbjct: 776 RTHPRIRRLVYISCNPDSLVANAIELCTPSSEKQE-KNKGNRG--WRTMSSAGLARQRTK 832
Query: 431 SMPTSSPFSPVKAVAVDMFPRTPHCEMIMLMER 529
SMP S PF P +A+AVD+FP T HCEM+ML ER
Sbjct: 833 SMPNSEPFVPKRAMAVDLFPHTSHCEMVMLFER 865
>tr|B8AU79|B8AU79_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_14559 PE=4 SV=1
Length = 805
Score = 149 bits (377), Expect = 8e-35
Identities = 79/153 (51%), Positives = 100/153 (65%), Gaps = 1/153 (0%)
Frame = +2
Query: 74 DSTELSSVQTGDDASTNQNELGSHPEDGEKENLGSGKFTSVVVLVDPPRSGLHPVALKLL 253
+S +L +D T+ + GS + + + +F +V +VDPPR GLHP +K L
Sbjct: 658 ESVDLKVSDCLEDRKTSDD--GSSISNNDVTAATACQFEDIVAIVDPPRVGLHPTVIKAL 715
Query: 254 RTHERIHRLVYVSCNPDTLLANAVELCTPSGTGDPGKGAGQRGGPWR-RSAVGLARQRVK 430
RTH RI RLVY+SCNPD+L+ANA+ELCTPS K G RG WR S+ GLARQR K
Sbjct: 716 RTHPRIRRLVYISCNPDSLVANAIELCTPSSEKQE-KNKGNRG--WRTMSSAGLARQRTK 772
Query: 431 SMPTSSPFSPVKAVAVDMFPRTPHCEMIMLMER 529
SMP S PF P +A+AVD+FP T HCEM+ML ER
Sbjct: 773 SMPNSEPFVPKRAMAVDLFPHTSHCEMVMLFER 805
>tr|Q9SKM5|Q9SKM5_ARATH Putative RNA methyltransferase OS=Arabidopsis
thaliana GN=At2g28450 PE=2 SV=1
Length = 850
Score = 148 bits (373), Expect = 2e-34
Identities = 72/124 (58%), Positives = 88/124 (70%)
Frame = +2
Query: 158 EKENLGSGKFTSVVVLVDPPRSGLHPVALKLLRTHERIHRLVYVSCNPDTLLANAVELCT 337
E E +F +VV +VDPPRSGLHP +K LRTH R+ RLVY+SCNP+TL+ANA+ELCT
Sbjct: 728 EPEKTTKPQFKNVVAIVDPPRSGLHPAVIKALRTHPRLKRLVYISCNPETLVANAIELCT 787
Query: 338 PSGTGDPGKGAGQRGGPWRRSAVGLARQRVKSMPTSSPFSPVKAVAVDMFPRTPHCEMIM 517
PS +P +G G + LAR R KSMPTS F PVKA+AVD+FP T HCEM+M
Sbjct: 788 PS-FDEPDRGNKNYRGRKKIGIAALARHRAKSMPTSEAFRPVKAMAVDLFPHTDHCEMVM 846
Query: 518 LMER 529
L+ER
Sbjct: 847 LLER 850
>tr|Q8L7S3|Q8L7S3_ARATH At2g28450/T1B3.3 OS=Arabidopsis thaliana
GN=At2g28450 PE=2 SV=1
Length = 809
Score = 148 bits (373), Expect = 2e-34
Identities = 72/124 (58%), Positives = 88/124 (70%)
Frame = +2
Query: 158 EKENLGSGKFTSVVVLVDPPRSGLHPVALKLLRTHERIHRLVYVSCNPDTLLANAVELCT 337
E E +F +VV +VDPPRSGLHP +K LRTH R+ RLVY+SCNP+TL+ANA+ELCT
Sbjct: 687 EPEKTTKPQFKNVVAIVDPPRSGLHPAVIKALRTHPRLKRLVYISCNPETLVANAIELCT 746
Query: 338 PSGTGDPGKGAGQRGGPWRRSAVGLARQRVKSMPTSSPFSPVKAVAVDMFPRTPHCEMIM 517
PS +P +G G + LAR R KSMPTS F PVKA+AVD+FP T HCEM+M
Sbjct: 747 PS-FDEPDRGNKNYRGRKKIGIAALARHRAKSMPTSEAFRPVKAMAVDLFPHTDHCEMVM 805
Query: 518 LMER 529
L+ER
Sbjct: 806 LLER 809
>tr|A9T094|A9T094_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_138354 PE=4 SV=1
Length = 764
Score = 148 bits (373), Expect = 2e-34
Identities = 77/152 (50%), Positives = 105/152 (69%), Gaps = 1/152 (0%)
Frame = +2
Query: 77 STELSSVQTGDDASTNQNELGSHPEDGEKENLGSG-KFTSVVVLVDPPRSGLHPVALKLL 253
S + S +TG ++N+ ++ + ++N S +F ++V +VDPPR GLH V L+ L
Sbjct: 615 SQKASEPETGKSEASNEEQVSTLVSPANQQNGDSRPRFNNIVAIVDPPRVGLHHVVLRTL 674
Query: 254 RTHERIHRLVYVSCNPDTLLANAVELCTPSGTGDPGKGAGQRGGPWRRSAVGLARQRVKS 433
R H+++ RLVY+SCNPD+LLANAVELC P G P + QRGG +R S +G AR+RVK+
Sbjct: 675 RLHKQLRRLVYISCNPDSLLANAVELCMPIKEG-PVEKQKQRGG-FRGSNLGHARRRVKT 732
Query: 434 MPTSSPFSPVKAVAVDMFPRTPHCEMIMLMER 529
+P S PF PVKA AVD+FP T HCEM+ML ER
Sbjct: 733 LPPSEPFRPVKACAVDLFPHTKHCEMVMLFER 764
>tr|Q01G39|Q01G39_OSTTA tRNA uracil-5-methyltransferase and related
tRNA-modifying enzymes (ISS) (Fragment) OS=Ostreococcus
tauri GN=Ot01g03940 PE=4 SV=1
Length = 652
Score = 93.2 bits (230), Expect = 9e-18
Identities = 49/116 (42%), Positives = 62/116 (53%)
Frame = +2
Query: 182 KFTSVVVLVDPPRSGLHPVALKLLRTHERIHRLVYVSCNPDTLLANAVELCTPSGTGDPG 361
+F VV +VDPPR GLH L LR +R+ RLVYVSCN T+ N ++LC P G G
Sbjct: 563 EFDDVVAIVDPPRGGLHRSVLTALRREKRLKRLVYVSCNSSTMAKNVIDLCAPQGYDGNG 622
Query: 362 KGAGQRGGPWRRSAVGLARQRVKSMPTSSPFSPVKAVAVDMFPRTPHCEMIMLMER 529
GA PF+PVKA+A+D+FP T H E I+L+ER
Sbjct: 623 GGA--------------------------PFAPVKAIALDLFPHTAHVEAIVLLER 652
>tr|A4RRI9|A4RRI9_OSTLU Predicted protein OS=Ostreococcus
lucimarinus (strain CCE9901) GN=OSTLU_48278 PE=4 SV=1
Length = 581
Score = 92.4 bits (228), Expect = 1e-17
Identities = 47/116 (40%), Positives = 62/116 (53%)
Frame = +2
Query: 182 KFTSVVVLVDPPRSGLHPVALKLLRTHERIHRLVYVSCNPDTLLANAVELCTPSGTGDPG 361
+F VV +VDPPR+GLH L LR R+ RLVYVSCN +T+ N ++LC P G G
Sbjct: 492 EFDDVVAIVDPPRAGLHRHVLSALRRENRLKRLVYVSCNANTMATNVIDLCVPQGADGNG 551
Query: 362 KGAGQRGGPWRRSAVGLARQRVKSMPTSSPFSPVKAVAVDMFPRTPHCEMIMLMER 529
G PF+PVKA+A+D+FP T H E ++L+ER
Sbjct: 552 GGV--------------------------PFTPVKALALDLFPHTAHVEAVLLLER 581
>tr|Q5XIQ6|Q5XIQ6_RAT HpaII tinys locus 9c OS=Rattus norvegicus
GN=Trmt2a PE=2 SV=1
Length = 615
Score = 86.7 bits (213), Expect = 8e-16
Identities = 49/113 (43%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
Frame = +2
Query: 194 VVVLVDPPRSGLHPVALKLLRTHERIHRLVYVSCNPDTLLANAVELC-TPSGTGDPGKGA 370
+V ++DPPR+GLH + +R E I RL+YVSCNP + N V+LC PS
Sbjct: 496 LVAVLDPPRAGLHSKVILAMRKAENIKRLLYVSCNPRAAMGNFVDLCRAPS--------- 546
Query: 371 GQRGGPWRRSAVGLARQRVKSMPTSSPFSPVKAVAVDMFPRTPHCEMIMLMER 529
RVK +PF PVKAVAVD+FP+TPHCEM++L ER
Sbjct: 547 ----------------NRVK----GTPFHPVKAVAVDLFPQTPHCEMLILFER 579
>tr|Q3UYU2|Q3UYU2_MOUSE Putative uncharacterized protein OS=Mus
musculus GN=Trmt2a PE=2 SV=1
Length = 613
Score = 86.7 bits (213), Expect = 8e-16
Identities = 49/113 (43%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
Frame = +2
Query: 194 VVVLVDPPRSGLHPVALKLLRTHERIHRLVYVSCNPDTLLANAVELC-TPSGTGDPGKGA 370
+V ++DPPR+GLH + +R E I RL+YVSCNP + N V+LC PS
Sbjct: 495 LVAVLDPPRAGLHSKVILAIRKAENIKRLLYVSCNPRAAMGNFVDLCRAPS--------- 545
Query: 371 GQRGGPWRRSAVGLARQRVKSMPTSSPFSPVKAVAVDMFPRTPHCEMIMLMER 529
RVK +PF PVKAVAVD+FP+TPHCEM++L ER
Sbjct: 546 ----------------NRVK----GTPFHPVKAVAVDLFPQTPHCEMLILFER 578
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