BP916186 |
Clone id |
YMU001_000084_C10 |
Library |
YMU01 |
Length |
463 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000084_C10. |
Accession |
BP916186 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL10Contig1 |
Sequence |
CGGGCACGACAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAA GGTCCCCTCAATGCTCTAGCGCCCGCACCGGATATGGACCGAACTGTCTCACGACGTTCT GAACCCAGCTCACGTACCGCTTTAGTGGGCGAACAGCCCAACCCTTGGGACGTACTACCG CCCCAGGTGGCGAAGAGCCGACATCGAGGTGCCAAACCTTCCCGTCGATGTGAACTCTTG GGGAAGATCAGCCTGTTATCCTTAGAGTAACTTTTATCCGTTGAGCGACGGCCCTTCCAC TTGGAACCGTCGGATCACTAAGGCCGACTTTCGTCCCTGCTCGACTGGTAGGTCTCGCAG TCAAGCTCCCTTCTGCCTTTGCACTCGTAGGCTGATTTCCGTCCAGCCTGAGGAAACCTT TGCGCGCCTCCGTTACTCTTTNGGGAGGCCTACGCCCCATAGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9PLI5 |
Definition |
sp|Q9PLI5|Y114_CHLMU Uncharacterized protein TC_0114 OS=Chlamydia muridarum |
Align length |
80 |
Score (bit) |
92.0 |
E-value |
1.0e-18 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916186|Adiantum capillus-veneris mRNA, clone: YMU001_000084_C10. (463 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9PLI5|Y114_CHLMU Uncharacterized protein TC_0114 OS=Chlamydi... 92 1e-18 sp|P70906|VLP18_BORHE Variable large protein 18 OS=Borrelia herm... 33 0.60 sp|O94925|GLSK_HUMAN Glutaminase kidney isoform, mitochondrial O... 33 0.77 sp|Q8C7E9|CSTFT_MOUSE Cleavage stimulation factor 64 kDa subunit... 31 2.2 sp|Q4U0G1|CLAP1_XENLA CLIP-associating protein 1 OS=Xenopus laev... 31 3.0 sp|P13264|GLSK_RAT Glutaminase kidney isoform, mitochondrial OS=... 30 5.0 sp|O10312|Y054_NPVOP Uncharacterized 42.5 kDa protein OS=Orgyia ... 30 5.1 sp|Q5SZD1|CF141_HUMAN Uncharacterized protein C6orf141 OS=Homo s... 30 6.5 sp|A0PT76|LEXA_MYCUA LexA repressor OS=Mycobacterium ulcerans (s... 29 8.7
>sp|Q9PLI5|Y114_CHLMU Uncharacterized protein TC_0114 OS=Chlamydia muridarum GN=TC_0114 PE=4 SV=2 Length = 122
Score = 92.0 bits (227), Expect = 1e-18 Identities = 46/80 (57%), Positives = 49/80 (61%) Frame = +1
Query: 79 APAPDMDRTVSRRSEPSSRTALVGEQPNPWDVLPPQVAKSRHRGAKPSRRCXXXXXXXXX 258 AP D D+TVSRR EPSSRTAL+GEQPNPWD+L PQ A SRHRGAKP RR Sbjct: 43 APTKDRDQTVSRRFEPSSRTALIGEQPNPWDLLQPQDAMSRHRGAKPPRRYELLVAISLL 102
Query: 259 XXXXXXXXXRRPFHLEPSDH 318 RR FH P DH Sbjct: 103 SPEYLLSVKRRRFHFPPPDH 122
>sp|P70906|VLP18_BORHE Variable large protein 18 OS=Borrelia hermsii GN=vlp18 PE=3 SV=1 Length = 360
Score = 33.1 bits (74), Expect = 0.60 Identities = 16/40 (40%), Positives = 23/40 (57%) Frame = -1
Query: 403 DGNQPTSAKAEGSLTARPTSRAGTKVGLSDPTVPSGRAVA 284 +G+Q A A+G+ TA ++ GTK LS+ P AVA Sbjct: 250 EGDQALGAAADGTTTAMSFAKGGTKDNLSNANTPKAAAVA 289
>sp|O94925|GLSK_HUMAN Glutaminase kidney isoform, mitochondrial OS=Homo sapiens GN=GLS PE=1 SV=1 Length = 669
Score = 32.7 bits (73), Expect = 0.77 Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 6/69 (8%) Frame = -3
Query: 218 GLAPRCRLFATWGGS------TSQGLGCSPTKAVRELGSERRETVRSISGAGARALRGPF 57 G A RL WGG ++GL SP++ ++ELG +S A A GP Sbjct: 47 GPAAAARLHPWWGGGGWPAEPLARGLSSSPSEILQELGKGSTHPQPGVSPPAAPAAPGP- 105
Query: 56 PSTRGPGRT 30 GPG T Sbjct: 106 --KDGPGET 112
>sp|Q8C7E9|CSTFT_MOUSE Cleavage stimulation factor 64 kDa subunit, tau variant OS=Mus musculus GN=Cstf2t PE=1 SV=2 Length = 632
Score = 31.2 bits (69), Expect = 2.2 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 6/54 (11%) Frame = -3
Query: 182 GGSTSQGLGCSP--TKAVRELGSERRETVRSISGAGARA----LRGPFPSTRGP 39 GG S+G+ P T+ + G ERR ++ G A +RGP PS+RGP Sbjct: 421 GGRESRGMETRPMETEVLEPRGMERRMETCAMETRGMDARGLEMRGPGPSSRGP 474
>sp|Q4U0G1|CLAP1_XENLA CLIP-associating protein 1 OS=Xenopus laevis GN=clasp1 PE=2 SV=1 Length = 1468
Score = 30.8 bits (68), Expect = 3.0 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = -1
Query: 406 LDGNQPTSAKAEGSLTARPTSRAGTKVGLSDPTVPSGRA 290 +DGN+P+SA + S A T+R G +G + PS A Sbjct: 247 VDGNRPSSASSSASSKAPQTARRGVSLGTARRPGPSSAA 285
>sp|P13264|GLSK_RAT Glutaminase kidney isoform, mitochondrial OS=Rattus norvegicus GN=Gls PE=1 SV=2 Length = 674
Score = 30.0 bits (66), Expect = 5.0 Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 11/74 (14%) Frame = -3
Query: 218 GLAPRCRLFATWGGST------SQGLGCSPTKAVRELGS-----ERRETVRSISGAGARA 72 GL RL WGG S GL SP++ ++ELG ++++ + GA A Sbjct: 47 GLVAAARLHPWWGGGGRAKGPGSGGLSSSPSEILQELGKGGTPPQQQQQQQQQPGASPPA 106
Query: 71 LRGPFPSTRGPGRT 30 GP S PG T Sbjct: 107 APGPKDS---PGET 117
>sp|O10312|Y054_NPVOP Uncharacterized 42.5 kDa protein OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=ORF58 PE=4 SV=1 Length = 378
Score = 30.0 bits (66), Expect = 5.1 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = -1
Query: 208 LDVGSSPPGAVVRPKGWAVRPLKRYVSWVQN 116 L G +PPG ++ P V+ + RYV+W N Sbjct: 279 LSYGGAPPGHLMCPPRAIVKKIYRYVNWASN 309
>sp|Q5SZD1|CF141_HUMAN Uncharacterized protein C6orf141 OS=Homo sapiens GN=C6orf141 PE=2 SV=2 Length = 244
Score = 29.6 bits (65), Expect = 6.5 Identities = 23/57 (40%), Positives = 25/57 (43%) Frame = -3
Query: 278 DKSYSKDNRLIFPKSSHRREGLAPRCRLFATWGGSTSQGLGCSPTKAVRELGSERRE 108 D S S + FP+ R LAP R AT G S SQG G A R LG E Sbjct: 21 DSSRSLGDLGPFPREVGRGAPLAPGARNPATAGASRSQGGGHEDRTADRALGPRAGE 77
>sp|A0PT76|LEXA_MYCUA LexA repressor OS=Mycobacterium ulcerans (strain Agy99) GN=lexA PE=3 SV=1 Length = 244
Score = 29.3 bits (64), Expect = 8.7 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%) Frame = -1
Query: 433 TEARKGFLRLDGNQPTSAKAEG---SLTARPTSRAGTKVGLSDPT 308 T RKG+LR D N+P + G ++TA P + L +PT Sbjct: 79 TLERKGYLRRDPNRPRAVDVRGADDTVTAAPVTDVAGSDALPEPT 123
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q4EE25 |
Definition |
tr|Q4EE25|Q4EE25_LISMO Putative uncharacterized protein OS=Listeria monocytogenes str. 4b H7858 |
Align length |
111 |
Score (bit) |
180.0 |
E-value |
3.0e-44 |
Report |
|