BP916188
Clone id YMU001_000084_C12
Library
Length 417
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000084_C12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CAAAAACAAACACTTCTTGTTTTCCATATCACCATTCATTTGAGCCTCCTACAATTTTCA
TGTGAGAGTTCCGGCATAAGCACTCATCCAAAATGTTAAACAAGAACTTTTCACCTACTT
TCTAACTTACACTATCAAACTCAGTACATTTATTGGCTTCTTGTGATTGTCCACAAACAA
ATCCATCTTGCTTCTTCTTGAAAGCCTTTTGAGTACAAAGTGTAACTTCTTTGGCAAATG
AACTCTCCCTATCAATCAAGTGATAGTCGTCAACTAGTTTTTCAGCTGGGTTGTATGAAC
ACCCATATCAGTATTTGTAAGTTTTCGACATATGAACCTCCTCAAGCTTTATTTTTCTTC
TTCCGTTGACTCTTACATAGCAATTTCGGCTATGGATGTAGAATCCTGACGCCTTTG
■■Homology search results ■■ -
sp_hit_id Q0VBV7
Definition sp|Q0VBV7|K1377_MOUSE Uncharacterized protein KIAA1377 OS=Mus musculus
Align length 79
Score (bit) 31.2
E-value 1.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916188|Adiantum capillus-veneris mRNA, clone:
YMU001_000084_C12.
(417 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q0VBV7|K1377_MOUSE Uncharacterized protein KIAA1377 OS=Mus mu... 31 1.7
sp|Q9RQJ2|PAD_PORGI Peptidylarginine deiminase OS=Porphyromonas ... 29 8.4

>sp|Q0VBV7|K1377_MOUSE Uncharacterized protein KIAA1377 OS=Mus
musculus GN=Kiaa1377 PE=2 SV=1
Length = 1103

Score = 31.2 bits (69), Expect = 1.7
Identities = 19/79 (24%), Positives = 33/79 (41%)
Frame = -3

Query: 394 HSRNCYVRVNGRRKIKLEEVHMSKTYKY*YGCSYNPAEKLVDDYHLIDRESSFAKEVTLC 215
H ++ R+N +++K + T K + +KL++D HL D + F EV
Sbjct: 181 HQKHLVRRINRNKEMKENNIANLATNKNVFQLKLEETQKLLEDQHLSDLQ-KFCDEVNQI 239

Query: 214 TQKAFKKKQDGFVCGQSQE 158
T D G+ +E
Sbjct: 240 TNSETLSSIDSLEAGEREE 258


>sp|Q9RQJ2|PAD_PORGI Peptidylarginine deiminase OS=Porphyromonas
gingivalis GN=PG_1424 PE=1 SV=1
Length = 556

Score = 28.9 bits (63), Expect = 8.4
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Frame = -3

Query: 382 CYVRVNGRRKIKLEEVHMSKTYKY*YG-CSYNPAEKLVDDYHLIDRESSFAKEVTLCTQK 206
CY R+NG K ++ M T Y Y N +K+ +Y++ ++S KE
Sbjct: 397 CYYRINGSGSFKAADMTMESTGHYTYSFTGLNKNDKV--EYYISAADNSGRKET-----Y 449

Query: 205 AFKKKQDGFVCGQSQEANKCT 143
F + D F E N CT
Sbjct: 450 PFIGEPDPFKFTCMNETNTCT 470


tr_hit_id Q483L8
Definition tr|Q483L8|Q483L8_COLP3 Putative uncharacterized protein OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681)
Align length 40
Score (bit) 34.7
E-value 2.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916188|Adiantum capillus-veneris mRNA, clone:
YMU001_000084_C12.
(417 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q483L8|Q483L8_COLP3 Putative uncharacterized protein OS=Colwe... 35 2.4
tr|B3LBQ9|B3LBQ9_PLAKH Putative uncharacterized protein OS=Plasm... 33 7.1

>tr|Q483L8|Q483L8_COLP3 Putative uncharacterized protein
OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681)
GN=CPS_2018 PE=4 SV=1
Length = 274

Score = 34.7 bits (78), Expect = 2.4
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 6/40 (15%)
Frame = -1

Query: 249 GRVHLPKKLHFVLKRLSRRS------KMDLFVDNHKKPIN 148
G VH PKK ++++KR +RS ++ FV NH K +N
Sbjct: 134 GSVHFPKKCYYMIKRGDKRSINPCIYRLSYFVKNHSKNLN 173


>tr|B3LBQ9|B3LBQ9_PLAKH Putative uncharacterized protein
OS=Plasmodium knowlesi (strain H) GN=PKH_140860 PE=4
SV=1
Length = 1552

Score = 33.1 bits (74), Expect = 7.1
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 7/57 (12%)
Frame = -3

Query: 229 EVTLCTQKAF------KKKQDGFVCGQSQEANKC-TEFDSVS*KVGEKFLFNILDEC 80
+V LCT K KKK++GF E N C TE+ ++ + +K+L +L+ C
Sbjct: 553 QVWLCTSKYMFKIVVSKKKREGFYLNDYTEVNDCETEYANLKPSLTKKYLSKMLEAC 609