BP916191 [AcEST]

BP916191
Clone id	YMU001_000084_D03
Library	YMU01
Length	563
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000084_D03.
Accession	BP916191
Tissue type	prothallium
Developmental stage	-
Contig ID	CL3250Contig1
Sequence	GAGATATACCTGGCAGGTACTCTATTCGCTTTTGTACATTGGCTTGTCTTCTTCGTCGTA TTTTTAATTGGTAATCGTTGCTTAAAGGAAGATGGTGAAGTTTGCACTCCCATTTAAGGA TTGATCACCTAATGCTACAAGTATGTATAAGTTTTCTTTCATGCTAATTTTGTCCCAACA TAAAGTTATTACTTGCCAATCCTACTTGACCAGCCTACATAATAGGCTGAAAACTTGAGG TTGCTAGATTGCTGTGCATGACCTTCTAGCTAAAGTGCTGGATGTTTTTAAGTCTTCTTT ATTTTGTTTCAATACTCTCGATGGATGGATGGCGAATCCCCATACTCACATCATGATGAT ATCATGCCAGCATACCTTATGCTTGTATATAACCAGTACCAATGTATGATATGGATATTT CTAAGTGTAGACTCTACATGTACTCTGTACTTAAGGTCATCAGCCCAAAGCAAATTTGGG TGTCTTAAGTGTACATCGCAGCGCCTCTATCTCACATAGCTTGTGCACTGGCATGCAAAC CAGCACTCTGATCTCTCCATCTG
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q6UY61
Definition	sp\|Q6UY61\|L_SABVB RNA-directed RNA polymerase OS=Sabia virus (isolate Human/Brasil/SPH114202/1990)
Align length	29
Score (bit)	30.0
E-value	8.2
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP916191\|Adiantum capillus-veneris mRNA, clone: YMU001_000084_D03. (563 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q6UY61\|L_SABVB RNA-directed RNA polymerase OS=Sabia virus (is... 30 8.2 sp\|Q8K448\|ABCA5_MOUSE ATP-binding cassette sub-family A member 5... 30 8.2 >sp\|Q6UY61\|L_SABVB RNA-directed RNA polymerase OS=Sabia virus (isolate Human/Brasil/SPH114202/1990) GN=L PE=3 SV=1 Length = 2212 Score = 30.0 bits (66), Expect = 8.2 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = -1 Query: 488 LRHPNLLWADDLKYRVHVESTLRNIHIIH 402 L +PNL WA K + H+E L HI+H Sbjct: 1712 LSNPNLFWAVKPKIQKHIEDRLSLNHILH 1740 >sp\|Q8K448\|ABCA5_MOUSE ATP-binding cassette sub-family A member 5 OS=Mus musculus GN=Abca5 PE=1 SV=2 Length = 1642 Score = 30.0 bits (66), Expect = 8.2 Identities = 18/58 (31%), Positives = 27/58 (46%) Frame = +1 Query: 250 CCAPXXXXAGCFVFFILFQYSRWMDGESPYSHHDDIMPAYLMLVYNQYQCMIWIFL 423 C A P GC + FI + E+ Y+ D ++ A +M QC++WIFL Sbjct: 1171 CIAIPIYPLLGCL-ISFIKGSWKNMPKNENTYNPWDRLLVAVIM---PYLQCILWIFL 1224
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	B2S142
Definition	tr\|B2S142\|B2S142_BORHD Putative uncharacterized protein OS=Borrelia hermsii (strain DAH)
Align length	60
Score (bit)	35.0
E-value	2.8
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP916191\|Adiantum capillus-veneris mRNA, clone: YMU001_000084_D03. (563 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|B2S142\|B2S142_BORHD Putative uncharacterized protein OS=Borre... 35 2.8 >tr\|B2S142\|B2S142_BORHD Putative uncharacterized protein OS=Borrelia hermsii (strain DAH) GN=BH0699A PE=4 SV=1 Length = 276 Score = 35.0 bits (79), Expect = 2.8 Identities = 19/60 (31%), Positives = 34/60 (56%) Frame = +2 Query: 143 MYKFSFMLILSQHKVITCQSYLTSLHNRLKTGCIAVHDLLAKVLDVFKSSLFCFNTLD 322 +YK+SF+ L++ + I C+ + + +L+ I L+K++ KSSLFC+N D Sbjct: 195 VYKWSFVYFLNEQEKIICEINNSGSNFKLR-----IYADFSLSKIIRELKSSLFCYNVTD 249