BP916196 |
Clone id |
YMU001_000084_D09 |
Library |
YMU01 |
Length |
311 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000084_D09. |
Accession |
BP916196 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GCTACATCATCTTGTCACGACGGCATGTAGCATATCCTCTGTAACATGACCGCAATTTGT GAGGTCAAGTTTAAGAGTATGTTGAAAAGCCTCATCAACCACTGACATGTGCACCGGAGG TAGCTCTATCCTTAGTTCATGCAAACCCCCTACTAATCTGGTTAGCGGGTGGTTTTCCTT TGGGCATGTAATCTGTACTGTAGCCTCCCCATTTTTCATGTGAATGTTAACATGTTGCAT CGTACCAGCAGATGGAGAGTTGGCCCCCTCTTTGGTCTGCGAAATGGCCGACACTTCGCC CCCATCTGCAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9LNJ5 |
Definition |
sp|Q9LNJ5|BH013_ARATH Transcription factor bHLH13 OS=Arabidopsis thaliana |
Align length |
85 |
Score (bit) |
40.0 |
E-value |
0.004 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LLA6 |
Definition |
tr|B8LLA6|B8LLA6_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
68 |
Score (bit) |
54.3 |
E-value |
3.0e-06 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916196|Adiantum capillus-veneris mRNA, clone: YMU001_000084_D09. (311 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LLA6|B8LLA6_PICSI Putative uncharacterized protein OS=Picea... 54 3e-06 tr|A9SFN9|A9SFN9_PHYPA Predicted protein OS=Physcomitrella paten... 49 1e-04 tr|B8LLU3|B8LLU3_PICSI Putative uncharacterized protein OS=Picea... 44 0.005 tr|B4FY42|B4FY42_MAIZE Putative uncharacterized protein OS=Zea m... 43 0.007 tr|Q41102|Q41102_PHAVU Phaseolin G-box binding protein PG2 (Frag... 41 0.034 tr|Q400L2|Q400L2_CATRO MYC2 OS=Catharanthus roseus GN=myc2 PE=2 ... 40 0.045 tr|A7PC89|A7PC89_VITVI Chromosome chr2 scaffold_11, whole genome... 39 0.13 tr|Q700C0|Q700C0_SOLTU MYC transcription factor (Fragment) OS=So... 39 0.17 tr|Q27IK8|Q27IK8_PEA G-box element binding protein OS=Pisum sati... 39 0.17 tr|Q5N8F6|Q5N8F6_ORYSJ BHLH protein-like (Os01g0705700 protein) ... 38 0.22 tr|Q41101|Q41101_PHAVU Phaseolin G-box binding protein PG1 OS=Ph... 38 0.22 tr|A2ZX10|A2ZX10_ORYSJ Putative uncharacterized protein OS=Oryza... 38 0.22 tr|A2WU88|A2WU88_ORYSI Putative uncharacterized protein OS=Oryza... 38 0.22 tr|Q4JKA7|Q4JKA7_RHEAU Basic helix-loop-helix transcription fact... 38 0.29 tr|Q25BJ5|Q25BJ5_BRAOL Basic helix-loop-helix (BHLH) family tran... 38 0.29 tr|A7QWE9|A7QWE9_VITVI Chromosome undetermined scaffold_203, who... 37 0.38 tr|Q700B9|Q700B9_SOLTU MYC transcription factor (Fragment) OS=So... 37 0.65 tr|A6NAB4|A6NAB4_VITVI Myc2 bHLH protein OS=Vitis vinifera GN=My... 37 0.65 tr|Q9AYK0|Q9AYK0_ORYSA Putative MYC transcription factor OS=Oryz... 36 0.85 tr|Q6QJB9|Q6QJB9_ORYSA MYC protein OS=Oryza sativa PE=2 SV=1 36 0.85 tr|Q336P5|Q336P5_ORYSJ Os10g0575000 protein OS=Oryza sativa subs... 36 0.85 tr|B8BIE0|B8BIE0_ORYSI Putative uncharacterized protein OS=Oryza... 36 0.85 tr|A3C7K7|A3C7K7_ORYSJ Putative uncharacterized protein OS=Oryza... 36 0.85 tr|Q9ZPN6|Q9ZPN6_MAIZE Transcription factor MYC7E (Fragment) OS=... 35 1.4 tr|B6TSQ0|B6TSQ0_MAIZE DNA binding protein OS=Zea mays PE=2 SV=1 35 1.9 tr|B1N8M0|B1N8M0_BRAOG MYC OS=Brassica oleracea var. gemmifera P... 35 2.5 tr|B5YLJ3|B5YLJ3_THAPS Predicted protein OS=Thalassiosira pseudo... 34 4.2 tr|A9SFN7|A9SFN7_PHYPA Predicted protein OS=Physcomitrella paten... 34 4.2 tr|A9VBS9|A9VBS9_MONBE Predicted protein OS=Monosiga brevicollis... 34 4.2 tr|B0CXT8|B0CXT8_LACBS Predicted protein (Fragment) OS=Laccaria ... 34 4.2
>tr|B8LLA6|B8LLA6_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 590
Score = 54.3 bits (129), Expect = 3e-06 Identities = 23/68 (33%), Positives = 44/68 (64%) Frame = -3
Query: 231 VNIHMKNGEATVQITCPKENHPLTRLVGGLHELRIELPPVHMSVVDEAFQHTLKLDLTNC 52 +++ M +GEATV+++CPKE+HP+ R++ L L++++ ++S +E HT + L Sbjct: 510 IDVQMMSGEATVRVSCPKESHPVGRVMLALQRLQLDVHHANISAANENILHTFVIKLGGA 569
Query: 51 GHVTEDML 28 +T+D L Sbjct: 570 QVLTKDQL 577
>tr|A9SFN9|A9SFN9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_164647 PE=4 SV=1 Length = 800
Score = 49.3 bits (116), Expect = 1e-04 Identities = 26/95 (27%), Positives = 51/95 (53%) Frame = -3
Query: 288 AISQTKEGANSPSAGTMQHVNIHMKNGEATVQITCPKENHPLTRLVGGLHELRIELPPVH 109 +++ T N+PS GT + +H+ EA ++I C K++ L +++ L ELR+E+ + Sbjct: 682 SVNSTSISGNAPS-GTKPTIAVHILGQEAMIRINCLKDSVALLQMMMALQELRLEVRHSN 740
Query: 108 MSVVDEAFQHTLKLDLTNCGHVTEDMLHAVVTR*C 4 S + H + + + H T++ L A++ R C Sbjct: 741 TSTTQDMVLHIVIVKIEPTEHYTQEQLCAILERSC 775
>tr|B8LLU3|B8LLU3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 582
Score = 43.5 bits (101), Expect = 0.005 Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 1/67 (1%) Frame = -3
Query: 207 EATVQITCPKENHPLTRLVGGLHELRIELPPVHMSVV-DEAFQHTLKLDLTNCGHVTEDM 31 EA ++I C K NHP+ RL+ L EL +E+ +S V D T+ + +T G TE+ Sbjct: 511 EAIIRIQCTKHNHPVARLMTALQELDLEVLHASISTVKDSLIIQTVIVKMTR-GLYTEEQ 569
Query: 30 LHAVVTR 10 LHA++ + Sbjct: 570 LHALLCK 576
>tr|B4FY42|B4FY42_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 349
Score = 43.1 bits (100), Expect = 0.007 Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 5/88 (5%) Frame = -3
Query: 267 GANSPSAGTMQHVNIHMKNGEATVQITCPKENHPLTRLVGGLHELRIELPPVHMSV--VD 94 GA + + V + M G A++++ + L +LV GLH+LRI PP+H++V VD Sbjct: 246 GAAGAAGSAVADVEVTMVEGHASLKVLARRRPKQLLKLVAGLHQLRI--PPLHLNVTTVD 303
Query: 93 EAFQHTLKL---DLTNCGHVTEDMLHAV 19 +T L D +N G V ED+ AV Sbjct: 304 AMVLYTFSLKVEDDSNMGSV-EDIAAAV 330
>tr|Q41102|Q41102_PHAVU Phaseolin G-box binding protein PG2 (Fragment) OS=Phaseolus vulgaris GN=PG2 PE=2 SV=1 Length = 614
Score = 40.8 bits (94), Expect = 0.034 Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 7/79 (8%) Frame = -3
Query: 282 SQTKEGANSPSAGTMQ-----HVNIHMKNGEATVQITCPKENHPLTRLVGGLHELRIELP 118 + TK G NS + Q +++ + +A ++I C K+NHP RL+ L EL +++ Sbjct: 514 NHTKHGGNSNIKSSNQALIDLDIDVKIIGWDAMIRIQCSKKNHPAARLMAALMELDLDVH 573
Query: 117 PVHMSVVDEAF--QHTLKL 67 +SVV++ Q T+K+ Sbjct: 574 HASVSVVNDLMIQQATVKM 592
>tr|Q400L2|Q400L2_CATRO MYC2 OS=Catharanthus roseus GN=myc2 PE=2 SV=1 Length = 699
Score = 40.4 bits (93), Expect = 0.045 Identities = 22/79 (27%), Positives = 45/79 (56%), Gaps = 3/79 (3%) Frame = -3
Query: 294 VSAISQTKEGANSPSAGTMQ-HVNIHMKNGEATVQITCPKENHPLTRLVGGLHELRIELP 118 +S+ Q + +N S G + +++ + EA +++ K NHP R++G L +L +EL Sbjct: 594 LSSPDQDLKSSNKQSVGNLDMDIDVKIIGREAMIRVQSSKNNHPAARVMGALKDLDLELL 653
Query: 117 PVHMSVVDEAF--QHTLKL 67 +SVV++ Q+T+++ Sbjct: 654 HASVSVVNDLMIQQNTVRM 672
>tr|A7PC89|A7PC89_VITVI Chromosome chr2 scaffold_11, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00015763001 PE=4 SV=1 Length = 501
Score = 38.9 bits (89), Expect = 0.13 Identities = 18/57 (31%), Positives = 36/57 (63%), Gaps = 2/57 (3%) Frame = -3
Query: 231 VNIHMKNGEATVQITCPKENHPLTRLVGGLHELRIELPPVHMSVVDEAF--QHTLKL 67 +++ + +A ++I C K+NHP +L+G L EL +++ +SVV++ Q T+K+ Sbjct: 423 IDVKIIGWDAMIRIQCSKKNHPAAKLMGALKELDLDVNHASVSVVNDLMIQQATVKM 479
>tr|Q700C0|Q700C0_SOLTU MYC transcription factor (Fragment) OS=Solanum tuberosum GN=jamyc2 PE=2 SV=1 Length = 692
Score = 38.5 bits (88), Expect = 0.17 Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 2/74 (2%) Frame = -3
Query: 231 VNIHMKNGEATVQITCPKENHPLTRLVGGLHELRIELPPVHMSVVDEAF--QHTLKLDLT 58 +++ + +A + I C K+NHP RL+ L EL +++ +SVV++ Q T+K+ Sbjct: 610 IDVKIIGWDAMIGIQCNKKNHPAARLMAALMELDLDVHHASVSVVNDLMIQQATVKM--- 666
Query: 57 NCGHVTEDMLHAVV 16 H TE+ L + Sbjct: 667 GSRHYTEEQLRVAL 680
>tr|Q27IK8|Q27IK8_PEA G-box element binding protein OS=Pisum sativum GN=GBF PE=2 SV=1 Length = 646
Score = 38.5 bits (88), Expect = 0.17 Identities = 16/74 (21%), Positives = 41/74 (55%) Frame = -3
Query: 231 VNIHMKNGEATVQITCPKENHPLTRLVGGLHELRIELPPVHMSVVDEAFQHTLKLDLTNC 52 +++ + +A ++I C K+NHP +L+ L EL +++ +SVV++ +++ + Sbjct: 568 IDVKIMGWDAMIRIQCSKKNHPAAKLMAALKELDLDVNHASVSVVNDLMIQQASINMGSR 627
Query: 51 GHVTEDMLHAVVTR 10 + E +L + ++ Sbjct: 628 FYTQEQLLSVLSSK 641
>tr|Q5N8F6|Q5N8F6_ORYSJ BHLH protein-like (Os01g0705700 protein) OS=Oryza sativa subsp. japonica GN=P0692C11.13 PE=4 SV=1 Length = 460
Score = 38.1 bits (87), Expect = 0.22 Identities = 18/74 (24%), Positives = 38/74 (51%) Frame = -3
Query: 231 VNIHMKNGEATVQITCPKENHPLTRLVGGLHELRIELPPVHMSVVDEAFQHTLKLDLTNC 52 V + E +++T P + HP++R+ + E +I + ++V D+A HTL + Sbjct: 378 VEVKAMQDEVVLRVTTPLDEHPISRVFHAMRESQISVVASDVAVSDDAVTHTLMVRSAGP 437
Query: 51 GHVTEDMLHAVVTR 10 +T + + A ++R Sbjct: 438 ERLTAETVLAAMSR 451
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