BP916207
Clone id YMU001_000084_E09
Library
Length 242
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000084_E09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AAGCATACAGGACGAGAAGGCGCCGTTCCGAGCCAATAAAAGGTAGACAGAGAGGACGAG
AAGGCAGGTGATGAGATGGCGAGCATACATAATAGAGAAGATCAGTTGCTGAAATGGCAA
GAAGTTTCCTGCATAGAGACTATGATAGGTTTTCCTCACACTGCTGGGATCATGGCATCC
GCAAATTGGGTGGTGGGTTTCCTGGAGTCAAGAATAGAATCTGTAAGGAGTGCTTGTGGA
TT
■■Homology search results ■■ -
sp_hit_id Q01021
Definition sp|Q01021|UL17_SHV21 Gene 32 protein OS=Saimiriine herpesvirus 2 (strain 11)
Align length 25
Score (bit) 29.6
E-value 4.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916207|Adiantum capillus-veneris mRNA, clone:
YMU001_000084_E09.
(242 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q01021|UL17_SHV21 Gene 32 protein OS=Saimiriine herpesvirus 2... 30 4.9
sp|Q8K3H5|MYO3A_MOUSE Myosin IIIA OS=Mus musculus GN=Myo3a PE=2 ... 30 4.9
sp|Q8NEV4|MYO3A_HUMAN Myosin IIIA OS=Homo sapiens GN=MYO3A PE=1 ... 30 4.9
sp|Q6P3Q4|STK4_XENTR Serine/threonine-protein kinase 4 OS=Xenopu... 29 8.4
sp|Q6PA14|STK4_XENLA Serine/threonine-protein kinase 4 OS=Xenopu... 29 8.4

>sp|Q01021|UL17_SHV21 Gene 32 protein OS=Saimiriine herpesvirus 2
(strain 11) GN=32 PE=3 SV=1
Length = 441

Score = 29.6 bits (65), Expect = 4.9
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3

Query: 165 WDHGIRKLGGGFPGVKNRICKECLW 239
W+ G+ LG P +K +C+E +W
Sbjct: 359 WEEGVHTLGKSVPELKEDVCEEKMW 383


>sp|Q8K3H5|MYO3A_MOUSE Myosin IIIA OS=Mus musculus GN=Myo3a PE=2
SV=1
Length = 1613

Score = 29.6 bits (65), Expect = 4.9
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = -2

Query: 232 HSLQILFLTPGNPPPNLRMP*SQQCEENLS*SLC 131
H ++ LF P NPPP LR P E N S C
Sbjct: 234 HPMRALFKIPRNPPPKLRQPELWSAEFNDFISKC 267


>sp|Q8NEV4|MYO3A_HUMAN Myosin IIIA OS=Homo sapiens GN=MYO3A PE=1
SV=2
Length = 1616

Score = 29.6 bits (65), Expect = 4.9
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = -2

Query: 232 HSLQILFLTPGNPPPNLRMP*SQQCEENLS*SLC 131
H ++ LF P NPPP LR P E N S C
Sbjct: 234 HPMRALFKIPRNPPPKLRQPELWSAEFNDFISKC 267


>sp|Q6P3Q4|STK4_XENTR Serine/threonine-protein kinase 4 OS=Xenopus
tropicalis GN=stk4 PE=2 SV=1
Length = 485

Score = 28.9 bits (63), Expect = 8.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2

Query: 232 HSLQILFLTPGNPPPNLRMP 173
H ++ +F+ P NPPP R P
Sbjct: 228 HPMRAIFMIPSNPPPTFRKP 247


>sp|Q6PA14|STK4_XENLA Serine/threonine-protein kinase 4 OS=Xenopus
laevis GN=stk4 PE=2 SV=1
Length = 485

Score = 28.9 bits (63), Expect = 8.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2

Query: 232 HSLQILFLTPGNPPPNLRMP 173
H ++ +F+ P NPPP R P
Sbjct: 228 HPMRAIFMIPSNPPPTFRKP 247


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916207|Adiantum capillus-veneris mRNA, clone:
YMU001_000084_E09.
(242 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******