BP916212 |
Clone id |
YMU001_000084_F02 |
Library |
YMU01 |
Length |
549 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000084_F02. |
Accession |
BP916212 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3672Contig1 |
Sequence |
ATCTTTAACTGTGAGGCATCCTTTTCTCTTTTGGAAAACCCTGACTTCTTTAGTAGCGAG CGTTTTGGTGAACTCTGCTGCACTGCTGGAAATTCCTGAGTGTCATCTGCCGCATGAACA CTGTGGGAGTTCTCCTTCAACCATCTGACTTCTTCTTCCTTTGCTTGTAACTTGCTGTTC AAAGTCTTGAGGTCAGATTCAAGTTGAGAGATCCTTTCCTCTTGCCGAGCTTCCAAAACC TCATGTAAACGCTTTGCTAAGGCTCTAGGAGAAACTGCGTAGTTTCGAACATGAAGGTCC TCATGCGATGAGCTGCTGCTATCTTCATCTGAGTCGACTTCAACTTCATGAGGAATGCCA AGGATTGTCAACTCACCTTGCACCAAATTTCCGACCTCCCCACACTCGCTAGATCCAGTG CTTTTATTTTGAAGCTTCCGGTCATCTCCATCACCCAAGCTTAACTCCATTCTCTCAAGC TCAGCCCCAAGCTCTCTTTCGAGCTTCAACATATCCTTCGAGGGTACATGCTCTAGAGTT GATGTGGCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8CS97 |
Definition |
sp|Q8CS97|RELA_STAES GTP pyrophosphokinase OS=Staphylococcus epidermidis (strain ATCC 12228) |
Align length |
53 |
Score (bit) |
33.9 |
E-value |
0.53 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A5B073 |
Definition |
tr|A5B073|A5B073_VITVI Putative uncharacterized protein OS=Vitis vinifera |
Align length |
156 |
Score (bit) |
79.7 |
E-value |
9.0e-14 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916212|Adiantum capillus-veneris mRNA, clone: YMU001_000084_F02. (549 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A5B073|A5B073_VITVI Putative uncharacterized protein OS=Vitis... 80 9e-14 tr|A7PDA5|A7PDA5_VITVI Chromosome chr17 scaffold_12, whole genom... 72 1e-11 tr|A9T3T2|A9T3T2_PHYPA Predicted protein OS=Physcomitrella paten... 64 7e-09 tr|A9STT0|A9STT0_PHYPA Predicted protein OS=Physcomitrella paten... 61 4e-08 tr|A7P2F2|A7P2F2_VITVI Chromosome chr1 scaffold_5, whole genome ... 59 2e-07 tr|A9RY29|A9RY29_PHYPA Predicted protein OS=Physcomitrella paten... 59 2e-07 tr|A9SSC4|A9SSC4_PHYPA Predicted protein OS=Physcomitrella paten... 58 4e-07 tr|Q2QN77|Q2QN77_ORYSJ Expressed protein (Putative uncharacteriz... 57 6e-07 tr|A2ZLY9|A2ZLY9_ORYSI Putative uncharacterized protein OS=Oryza... 57 6e-07 tr|Q2QN76|Q2QN76_ORYSJ Os12g0576300 protein OS=Oryza sativa subs... 55 2e-06 tr|Q0DE18|Q0DE18_ORYSJ Os06g0184200 protein OS=Oryza sativa subs... 54 7e-06 tr|B6SVT0|B6SVT0_MAIZE Putative uncharacterized protein OS=Zea m... 54 7e-06 tr|Q9FNR0|Q9FNR0_ARATH Emb|CAB62613.1 OS=Arabidopsis thaliana GN... 53 1e-05 tr|Q0WPB4|Q0WPB4_ARATH Putative uncharacterized protein At5g6104... 53 1e-05 tr|Q6NQ99|Q6NQ99_ARATH At4g31805 (Putative uncharacterized prote... 52 3e-05 tr|Q5SMN8|Q5SMN8_ORYSJ Putative uncharacterized protein P0554A06... 52 3e-05 tr|B8B3I8|B8B3I8_ORYSI Putative uncharacterized protein OS=Oryza... 52 3e-05 tr|A3B918|A3B918_ORYSJ Putative uncharacterized protein OS=Oryza... 52 3e-05 tr|Q6K8Z2|Q6K8Z2_ORYSJ Os02g0795200 protein OS=Oryza sativa subs... 50 6e-05 tr|A2XAJ0|A2XAJ0_ORYSI Putative uncharacterized protein OS=Oryza... 50 6e-05 tr|Q9LEV1|Q9LEV1_ARATH Putative uncharacterized protein T30N20_1... 45 0.002 tr|Q67WY8|Q67WY8_ORYSJ Os06g0648500 protein OS=Oryza sativa subs... 40 0.062 tr|A3BE35|A3BE35_ORYSJ Putative uncharacterized protein OS=Oryza... 40 0.062 tr|A2YFM5|A2YFM5_ORYSI Putative uncharacterized protein OS=Oryza... 40 0.062 tr|Q5AFK1|Q5AFK1_CANAL Putative uncharacterized protein CTR9 (Pu... 40 0.062 tr|B6SZ36|B6SZ36_MAIZE Putative uncharacterized protein OS=Zea m... 38 0.40 tr|A7PT03|A7PT03_VITVI Chromosome chr8 scaffold_29, whole genome... 37 0.52 tr|A5C568|A5C568_VITVI Putative uncharacterized protein OS=Vitis... 37 0.52 tr|A2BGR2|A2BGR2_DANRE Novel protein similar to mouse microtubul... 37 0.68 tr|Q820Q3|Q820Q3_NITEU Phage integrase:Chain length determinant ... 37 0.68
>tr|A5B073|A5B073_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038161 PE=4 SV=1 Length = 748
Score = 79.7 bits (195), Expect = 9e-14 Identities = 57/156 (36%), Positives = 79/156 (50%), Gaps = 4/156 (2%) Frame = -2
Query: 521 SKDMLKLERELGAELERMELSLGDGD-DRKLQNKSTGSSECGEVGNLVQGELTILGIPXX 345 S+ M K+E EL AELER+ELS+ +RKL N + V ++ QGEL + + Sbjct: 425 SELMSKIEAELEAELERLELSMNSSCLERKLSNLVELDPDI--VADVAQGELXVEMVGRQ 482
Query: 344 XXXXXXXXXXXXXXXDLHVRNYAVSPRALAKRLHEVLEARQEERISQLESDLKTLNSKLQ 165 H NYAVSPR L+ RLHEV+++R EER+ +LE++L+ N KLQ Sbjct: 483 TGGQDDSYQDVSSTSTTHSANYAVSPRELSLRLHEVIQSRLEERVKELETELQNSNRKLQ 542
Query: 164 AKEEEVRWLKENSHSVHAADDTQEFP---AVQQSSP 66 E E E TQ P V++S+P Sbjct: 543 FMESERLTCYEEFADSILGSSTQRTPIALPVEESNP 578
>tr|A7PDA5|A7PDA5_VITVI Chromosome chr17 scaffold_12, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016202001 PE=4 SV=1 Length = 497
Score = 72.4 bits (176), Expect = 1e-11 Identities = 52/147 (35%), Positives = 73/147 (49%), Gaps = 4/147 (2%) Frame = -2
Query: 494 ELGAELERMELSLGDGD-DRKLQNKSTGSSECGEVGNLVQGELTILGIPXXXXXXXXXXX 318 +L AELER+ELS+ +RKL N + V ++ QGEL + + Sbjct: 183 KLEAELERLELSMNSSCLERKLSNLVELDPDI--VADVAQGELKVEMVGRQTGGQDDSYQ 240
Query: 317 XXXXXXDLHVRNYAVSPRALAKRLHEVLEARQEERISQLESDLKTLNSKLQAKEEEVRWL 138 H NYAVSPR L+ RLHEV+++R EER+ +LE++L+ N KLQ E E Sbjct: 241 DVSSTSTTHSANYAVSPRELSLRLHEVIQSRLEERVKELETELQNSNRKLQFMESERLTC 300
Query: 137 KENSHSVHAADDTQEFP---AVQQSSP 66 E TQ P V++S+P Sbjct: 301 YEEFADSILGSSTQRTPIALPVEESNP 327
>tr|A9T3T2|A9T3T2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_87705 PE=4 SV=1 Length = 1147
Score = 63.5 bits (153), Expect = 7e-09 Identities = 44/127 (34%), Positives = 67/127 (52%) Frame = -2
Query: 512 MLKLERELGAELERMELSLGDGDDRKLQNKSTGSSECGEVGNLVQGELTILGIPXXXXXX 333 M LE EL AEL+ +L+ D Q + + V ++V G+L G+P Sbjct: 357 MADLEAELEAELD--QLTGRDSATMDSQYSAFDELDTDGVVSVVHGDLAPTGLPARVEES 414
Query: 332 XXXXXXXXXXXDLHVRNYAVSPRALAKRLHEVLEARQEERISQLESDLKTLNSKLQAKEE 153 + NYAVSPR L + LH++ +ARQ++ IS+LE DL+ SKLQ++++ Sbjct: 415 SDEDLSPPAQPAC-LNNYAVSPRELTRLLHKLQKARQDDLISELEEDLEAALSKLQSRDK 473
Query: 152 EVRWLKE 132 E+ LKE Sbjct: 474 ELEVLKE 480
>tr|A9STT0|A9STT0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_83900 PE=4 SV=1 Length = 1549
Score = 60.8 bits (146), Expect = 4e-08 Identities = 44/128 (34%), Positives = 65/128 (50%) Frame = -2
Query: 515 DMLKLERELGAELERMELSLGDGDDRKLQNKSTGSSECGEVGNLVQGELTILGIPXXXXX 336 +M LE EL AEL+ +L+ GD Q + + V ++V G+L G+P Sbjct: 767 EMADLEAELEAELD--QLTGGDSATVDSQYSAYDELDTDGVVSVVHGDLAPTGLPARIEE 824
Query: 335 XXXXXXXXXXXXDLHVRNYAVSPRALAKRLHEVLEARQEERISQLESDLKTLNSKLQAKE 156 + N AVSPR L + L ++ ARQ+E I++LE DLK SKL ++E Sbjct: 825 DSDEDLSPPTQAAC-LNNCAVSPRELTRLLRKLQAARQDELITELEEDLKAAQSKLLSRE 883
Query: 155 EEVRWLKE 132 +E+ LKE Sbjct: 884 KELELLKE 891
>tr|A7P2F2|A7P2F2_VITVI Chromosome chr1 scaffold_5, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00030034001 PE=4 SV=1 Length = 561
Score = 58.9 bits (141), Expect = 2e-07 Identities = 43/140 (30%), Positives = 66/140 (47%) Frame = -2
Query: 506 KLERELGAELERMELSLGDGDDRKLQNKSTGSSECGEVGNLVQGELTILGIPXXXXXXXX 327 K+E EL AELER+E ++ + + G + ++VQGEL + + Sbjct: 298 KIEAELEAELERLEQNMKASSSLERLSDFVGLDP-DFIADVVQGELRVDTLNRQPGEQSD 356
Query: 326 XXXXXXXXXDLHVRNYAVSPRALAKRLHEVLEARQEERISQLESDLKTLNSKLQAKEEEV 147 H NYAVSPR L+ RLHEV+++R E RI +LE+ L+ + + +E Sbjct: 357 SDLDVSGSSTHHSANYAVSPRELSLRLHEVIQSRLEARIIELEAALQNNQKRPHSMRQES 416
Query: 146 RWLKENSHSVHAADDTQEFP 87 +S + TQE P Sbjct: 417 IISTRELYSEVGSLSTQESP 436
>tr|A9RY29|A9RY29_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_161699 PE=4 SV=1 Length = 1693
Score = 58.5 bits (140), Expect = 2e-07 Identities = 42/137 (30%), Positives = 66/137 (48%) Frame = -2
Query: 542 STLEHVPSKDMLKLERELGAELERMELSLGDGDDRKLQNKSTGSSECGEVGNLVQGELTI 363 S E + M +LE EL AEL+ +L+ G+ Q + V +++ G+L Sbjct: 941 SEYESIQQDHMAELEAELEAELD--QLTGGESATMDSQYSVLDELDMDGVASVLYGDLAP 998
Query: 362 LGIPXXXXXXXXXXXXXXXXXDLHVRNYAVSPRALAKRLHEVLEARQEERISQLESDLKT 183 G+P + NYAVSPR L + L ++ ARQ+E I++LE DL+ Sbjct: 999 AGLPAGLEEDSDGDPSGPAQPAC-LNNYAVSPRELTRLLRKLQTARQDELITELEEDLEE 1057
Query: 182 LNSKLQAKEEEVRWLKE 132 SKL+ E+E+ K+ Sbjct: 1058 SQSKLRLMEKELEMWKD 1074
>tr|A9SSC4|A9SSC4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_233998 PE=4 SV=1 Length = 1520
Score = 57.8 bits (138), Expect = 4e-07 Identities = 43/137 (31%), Positives = 66/137 (48%) Frame = -2
Query: 542 STLEHVPSKDMLKLERELGAELERMELSLGDGDDRKLQNKSTGSSECGEVGNLVQGELTI 363 S E M +LE EL AEL+ +L+ + + Q + V ++V G+L Sbjct: 713 SQYETQQQHQMAELEAELEAELD--QLTGRESAAMESQYSVLDELDMDGVASVVYGDLEP 770
Query: 362 LGIPXXXXXXXXXXXXXXXXXDLHVRNYAVSPRALAKRLHEVLEARQEERISQLESDLKT 183 G+P + NYAVSPR L + L ++ ARQEE I++LE +L+ Sbjct: 771 TGLPAGVEEDSDDDLSALAQPAC-LNNYAVSPRELTRLLRKLQRARQEELITELEGELEA 829
Query: 182 LNSKLQAKEEEVRWLKE 132 SKLQ +E+E+ K+ Sbjct: 830 TQSKLQNREKELEMWKD 846
>tr|Q2QN77|Q2QN77_ORYSJ Expressed protein (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=LOC_Os12g38730 PE=4 SV=2 Length = 635
Score = 57.0 bits (136), Expect = 6e-07 Identities = 48/158 (30%), Positives = 70/158 (44%), Gaps = 7/158 (4%) Frame = -2
Query: 521 SKDMLKLERELGAELERMELSLGDGDDRKLQNKSTGSSECGEVGNLVQGELTILGI---- 354 S+ M K+E EL AEL R+EL++ + K Q E +G++VQGEL I Sbjct: 347 SEPMSKIEEELEAELARLELNI-TSNCLKEQTFDFSEVEQDLIGDIVQGELKIDTTHCDL 405
Query: 353 -PXXXXXXXXXXXXXXXXXDLHVRNYAVSPRALAKRLHEVLEARQEERISQLESDL--KT 183 H NY VSPR L+ RLH+V++ R EERI +LE+ L Sbjct: 406 ADHSSESAHGRDSRESSPDYTHDANYPVSPRDLSLRLHKVIQQRLEERIKELETTLAQSE 465
Query: 182 LNSKLQAKEEEVRWLKENSHSVHAADDTQEFPAVQQSS 69 + +++Q E + + QE P Q + Sbjct: 466 MQTQVQVMATEQILCERTCSDSDSGSPNQESPVYIQET 503
>tr|A2ZLY9|A2ZLY9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_38850 PE=4 SV=1 Length = 635
Score = 57.0 bits (136), Expect = 6e-07 Identities = 48/158 (30%), Positives = 70/158 (44%), Gaps = 7/158 (4%) Frame = -2
Query: 521 SKDMLKLERELGAELERMELSLGDGDDRKLQNKSTGSSECGEVGNLVQGELTILGI---- 354 S+ M K+E EL AEL R+EL++ + K Q E +G++VQGEL I Sbjct: 347 SEPMSKIEEELEAELARLELNI-TSNCLKEQTFDFSEVEQDLIGDIVQGELKIDTTHCDL 405
Query: 353 -PXXXXXXXXXXXXXXXXXDLHVRNYAVSPRALAKRLHEVLEARQEERISQLESDL--KT 183 H NY VSPR L+ RLH+V++ R EERI +LE+ L Sbjct: 406 ADHSSESAHGRDSRESSPDYTHDANYPVSPRDLSLRLHKVIQQRLEERIKELETTLAQSE 465
Query: 182 LNSKLQAKEEEVRWLKENSHSVHAADDTQEFPAVQQSS 69 + +++Q E + + QE P Q + Sbjct: 466 MQTQVQVMATEQILCERTCSDSDSGSPNQESPVYIQET 503
>tr|Q2QN76|Q2QN76_ORYSJ Os12g0576300 protein OS=Oryza sativa subsp. japonica GN=Os12g0576300 PE=4 SV=2 Length = 632
Score = 55.5 bits (132), Expect = 2e-06 Identities = 48/158 (30%), Positives = 72/158 (45%), Gaps = 7/158 (4%) Frame = -2
Query: 521 SKDMLKLERELGAELERMELSLGDGDDRKLQNKSTGSSECGEVGNLVQGELTILGI---- 354 S+ M K+E EL AEL R+EL++ L+ ++ SE +G++VQGEL I Sbjct: 347 SEPMSKIEEELEAELARLELNI---TSNCLKEQTFDFSE-DLIGDIVQGELKIDTTHCDL 402
Query: 353 -PXXXXXXXXXXXXXXXXXDLHVRNYAVSPRALAKRLHEVLEARQEERISQLESDL--KT 183 H NY VSPR L+ RLH+V++ R EERI +LE+ L Sbjct: 403 ADHSSESAHGRDSRESSPDYTHDANYPVSPRDLSLRLHKVIQQRLEERIKELETTLAQSE 462
Query: 182 LNSKLQAKEEEVRWLKENSHSVHAADDTQEFPAVQQSS 69 + +++Q E + + QE P Q + Sbjct: 463 MQTQVQVMATEQILCERTCSDSDSGSPNQESPVYIQET 500
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