BP916228 |
Clone id |
YMU001_000084_G09 |
Library |
YMU01 |
Length |
534 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000084_G09. |
Accession |
BP916228 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3805Contig1 |
Sequence |
GAATGAGCTTTTTGGCTTAAGGCTTATAATTATTGACCTTGAGGGTTCCTGCTTAATGGC TTAATTAGGCTGACGTTCGTAATTAAGAAGCTGTCGATCACCAAGAAGATCATCAACAAT TTGCGGCAATATGGCGCTTACAGAGATGGGATTTTATTGCTTTCTGCTCAAACTGGTGTA ATGGGTGTTTTCTGTGAATGGAAGCAGTAGTGCTAGTACGGTAGAAGCAGCTAGGCAACA GAACTCACCTTATAGAGACCATGAGAAGCTGCTGCTGCCTTTTGCAGGCTTACAGAAATG AGGATTATTGTCTTAGTTTTGGATGGGTGTCTTGTGAATATGGGTACTAGTTGTGAGGAC GAAGGTGGACGGAAGCAGCAGGAAAAAGAGCTCATCTCAAAGAGGAAAACTGCTGCTGCG GAGATGGCGGCATCTTGCGCGCAACGATGACAGAGTTAACGACCTCATCGGTGGGGTGGA ACTCAGAGAGGACCTCGAAACCGGGTTCCAACAGCATGTCGTTGTGGACGATGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9XGI7 |
Definition |
sp|Q9XGI7|NAS_SOLLC Nicotianamine synthase OS=Solanum lycopersicum |
Align length |
25 |
Score (bit) |
47.8 |
E-value |
3.0e-05 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PRR6 |
Definition |
tr|A7PRR6|A7PRR6_VITVI Chromosome chr14 scaffold_27, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
25 |
Score (bit) |
47.8 |
E-value |
0.0004 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916228|Adiantum capillus-veneris mRNA, clone: YMU001_000084_G09. (534 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PRR6|A7PRR6_VITVI Chromosome chr14 scaffold_27, whole genom... 48 4e-04 tr|A5B0Y3|A5B0Y3_VITVI Putative uncharacterized protein OS=Vitis... 48 4e-04 tr|A2Q2X7|A2Q2X7_MEDTR Nicotianamine synthase OS=Medicago trunca... 45 0.002 tr|A3DUI9|A3DUI9_MALXI Nicotianamine synthase OS=Malus xiaojinen... 45 0.003 tr|Q8GU17|Q8GU17_THLCA Nicotianamine synthase OS=Thlaspi caerule... 44 0.005 tr|Q6L5P3|Q6L5P3_ARATH Nicotianamine synthase OS=Arabidopsis tha... 43 0.009 tr|Q8LT19|Q8LT19_MAIZE ZmNAS2 protein OS=Zea mays GN=ZmNAS2 PE=2... 43 0.012 tr|Q10MJ0|Q10MJ0_ORYSJ Nicotianamine synthase 2, putative, expre... 42 0.015 tr|B8AMH0|B8AMH0_ORYSI Putative uncharacterized protein OS=Oryza... 42 0.015 tr|Q70II1|Q70II1_ARAHA Putative nicotianamine synthase OS=Arabid... 42 0.020 tr|B6U2X3|B6U2X3_MAIZE Nicotianamine synthase 3 OS=Zea mays PE=2... 42 0.026 tr|A7Q6G7|A7Q6G7_VITVI Chromosome chr11 scaffold_56, whole genom... 41 0.034 tr|A5BHX9|A5BHX9_VITVI Putative uncharacterized protein OS=Vitis... 41 0.034 tr|B4FAC0|B4FAC0_MAIZE Putative uncharacterized protein OS=Zea m... 41 0.044 tr|Q8S9C5|Q8S9C5_MAIZE ZmNAS1 protein OS=Zea mays GN=ZmNAS1 PE=2... 40 0.057 tr|Q3S4I5|Q3S4I5_TRIMO Nicotianamine sythase 3 (Fragment) OS=Tri... 40 0.075 tr|Q10MI8|Q10MI8_ORYSJ Nicotianamine synthase 1, putative, expre... 39 0.17 tr|Q8LT22|Q8LT22_MAIZE Nicotianamine synthase 3 OS=Zea mays GN=Z... 37 0.63 tr|B6TZC0|B6TZC0_MAIZE Nicotianamine synthase 3 OS=Zea mays PE=2... 36 1.1 tr|Q0UEH5|Q0UEH5_PHANO Putative uncharacterized protein OS=Phaeo... 33 7.0 tr|Q11QZ7|Q11QZ7_CYTH3 Putative uncharacterized protein OS=Cytop... 33 9.3
>tr|A7PRR6|A7PRR6_VITVI Chromosome chr14 scaffold_27, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022605001 PE=4 SV=1 Length = 308
Score = 47.8 bits (112), Expect = 4e-04 Identities = 21/25 (84%), Positives = 23/25 (92%) Frame = -3
Query: 502 GFEVLSEFHPTDEVVNSVIVARKMP 428 GFEVLS FHPTDEV+NSV+VARK P Sbjct: 249 GFEVLSIFHPTDEVINSVVVARKFP 273
>tr|A5B0Y3|A5B0Y3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020491 PE=4 SV=1 Length = 308
Score = 47.8 bits (112), Expect = 4e-04 Identities = 21/25 (84%), Positives = 23/25 (92%) Frame = -3
Query: 502 GFEVLSEFHPTDEVVNSVIVARKMP 428 GFEVLS FHPTDEV+NSV+VARK P Sbjct: 249 GFEVLSIFHPTDEVINSVVVARKFP 273
>tr|A2Q2X7|A2Q2X7_MEDTR Nicotianamine synthase OS=Medicago truncatula GN=MtrDRAFT_AC152185g32v2 PE=4 SV=1 Length = 282
Score = 45.4 bits (106), Expect = 0.002 Identities = 21/23 (91%), Positives = 22/23 (95%) Frame = -3
Query: 502 GFEVLSEFHPTDEVVNSVIVARK 434 GFEVLS FHPTDEV+NSVIVARK Sbjct: 251 GFEVLSIFHPTDEVINSVIVARK 273
>tr|A3DUI9|A3DUI9_MALXI Nicotianamine synthase OS=Malus xiaojinensis PE=2 SV=1 Length = 325
Score = 44.7 bits (104), Expect = 0.003 Identities = 18/23 (78%), Positives = 22/23 (95%) Frame = -3
Query: 502 GFEVLSEFHPTDEVVNSVIVARK 434 GFEVLS FHPTDEV+NS+++ARK Sbjct: 250 GFEVLSVFHPTDEVINSIVIARK 272
>tr|Q8GU17|Q8GU17_THLCA Nicotianamine synthase OS=Thlaspi caerulescens GN=nas1 PE=2 SV=1 Length = 321
Score = 43.9 bits (102), Expect = 0.005 Identities = 18/41 (43%), Positives = 28/41 (68%) Frame = -3
Query: 502 GFEVLSEFHPTDEVVNSVIVARKMPPSPQQQFSSLR*ALFP 380 GFEVLS +HPTD+V+NSV++++K+P + + L P Sbjct: 252 GFEVLSIYHPTDDVINSVVISKKLPVVSTENVGGVSCLLMP 292
>tr|Q6L5P3|Q6L5P3_ARATH Nicotianamine synthase OS=Arabidopsis thaliana GN=AtNAS4 PE=4 SV=1 Length = 324
Score = 43.1 bits (100), Expect = 0.009 Identities = 16/24 (66%), Positives = 23/24 (95%) Frame = -3
Query: 502 GFEVLSEFHPTDEVVNSVIVARKM 431 GFEVLS +HPTDEV+NS++++RK+ Sbjct: 253 GFEVLSVYHPTDEVINSIVISRKL 276
>tr|Q8LT19|Q8LT19_MAIZE ZmNAS2 protein OS=Zea mays GN=ZmNAS2 PE=2 SV=1 Length = 601
Score = 42.7 bits (99), Expect = 0.012 Identities = 20/45 (44%), Positives = 30/45 (66%) Frame = -3
Query: 532 IVHNDMLLEPGFEVLSEFHPTDEVVNSVIVARKMPPSPQQQFSSL 398 IV + + GF+VL+ +HP DEV+NSVI+ARK+ + S+L Sbjct: 245 IVDPEDIRRGGFDVLTVYHPDDEVINSVIIARKIDAHANTEVSAL 289
Score = 41.2 bits (95), Expect = 0.034 Identities = 19/34 (55%), Positives = 26/34 (76%) Frame = -3
Query: 532 IVHNDMLLEPGFEVLSEFHPTDEVVNSVIVARKM 431 IV + + GF+VL+ +HP DEV+NSVIVARK+ Sbjct: 523 IVDPEDIRRGGFDVLAVYHPDDEVINSVIVARKI 556
>tr|Q10MJ0|Q10MJ0_ORYSJ Nicotianamine synthase 2, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g19420 PE=4 SV=1 Length = 328
Score = 42.4 bits (98), Expect = 0.015 Identities = 20/36 (55%), Positives = 26/36 (72%) Frame = -3
Query: 532 IVHNDMLLEPGFEVLSEFHPTDEVVNSVIVARKMPP 425 IV + + GF+VL+ +HP DEV+NSVIVARK P Sbjct: 246 IVDLEDIRRGGFDVLAVYHPDDEVINSVIVARKADP 281
>tr|B8AMH0|B8AMH0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_11242 PE=4 SV=1 Length = 326
Score = 42.4 bits (98), Expect = 0.015 Identities = 20/36 (55%), Positives = 26/36 (72%) Frame = -3
Query: 532 IVHNDMLLEPGFEVLSEFHPTDEVVNSVIVARKMPP 425 IV + + GF+VL+ +HP DEV+NSVIVARK P Sbjct: 246 IVDLEDIRRGGFDVLAVYHPDDEVINSVIVARKADP 281
>tr|Q70II1|Q70II1_ARAHA Putative nicotianamine synthase OS=Arabidopsis halleri subsp. halleri GN=nas3 PE=2 SV=1 Length = 320
Score = 42.0 bits (97), Expect = 0.020 Identities = 16/25 (64%), Positives = 23/25 (92%) Frame = -3
Query: 502 GFEVLSEFHPTDEVVNSVIVARKMP 428 GFEVLS +HPTD+V+NSV++++K P Sbjct: 252 GFEVLSIYHPTDDVINSVVISKKHP 276
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