BP916230
Clone id YMU001_000084_G12
Library
Length 104
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000084_G12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTGACGATCCCATGCGCCGCAGTATTGAGCCAAGAGACCCTAAGTCTTTGTATATCAGTG
AATGGCAAGCTCACCATTATCAAGTACCCTTTCTCATCTTCATA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916230|Adiantum capillus-veneris mRNA, clone:
YMU001_000084_G12.
(104 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id A9U0L8
Definition tr|A9U0L8|A9U0L8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 34
Score (bit) 62.4
E-value 1.0e-08
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916230|Adiantum capillus-veneris mRNA, clone:
YMU001_000084_G12.
(104 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9U0L8|A9U0L8_PHYPA Predicted protein OS=Physcomitrella paten... 62 1e-08
tr|B6SV12|B6SV12_MAIZE SLT1 protein OS=Zea mays PE=2 SV=1 57 4e-07
tr|Q9FQY3|Q9FQY3_TOBAC SLT1 protein OS=Nicotiana tabacum PE=2 SV=1 57 5e-07
tr|Q10NA2|Q10NA2_ORYSJ SLT1 protein, putative, expressed (Putati... 56 8e-07
tr|Q0DT06|Q0DT06_ORYSJ Os03g0277100 protein (Fragment) OS=Oryza ... 56 8e-07
tr|A2XF46|A2XF46_ORYSI Putative uncharacterized protein OS=Oryza... 56 8e-07
tr|A7PNK9|A7PNK9_VITVI Chromosome chr8 scaffold_23, whole genome... 55 1e-06
tr|A7NZ35|A7NZ35_VITVI Chromosome chr6 scaffold_3, whole genome ... 55 1e-06
tr|Q943K6|Q943K6_ORYSJ cDNA clone:J023034F22, full insert sequen... 55 2e-06
tr|A2WWU6|A2WWU6_ORYSI Putative uncharacterized protein OS=Oryza... 55 2e-06
tr|B8A2M5|B8A2M5_MAIZE Putative uncharacterized protein OS=Zea m... 54 3e-06
tr|B8A1F4|B8A1F4_MAIZE Putative uncharacterized protein OS=Zea m... 54 3e-06
tr|Q3EBL0|Q3EBL0_ARATH Uncharacterized protein At2g37570.2 OS=Ar... 54 4e-06
tr|O80926|O80926_ARATH Expressed protein (Putative uncharacteriz... 54 4e-06
tr|B6SV01|B6SV01_MAIZE Putative uncharacterized protein OS=Zea m... 54 4e-06
tr|A7PIX0|A7PIX0_VITVI Chromosome chr13 scaffold_17, whole genom... 54 4e-06
tr|A5AGE0|A5AGE0_VITVI Putative uncharacterized protein OS=Vitis... 54 4e-06
tr|B6SW94|B6SW94_MAIZE SLT1 protein OS=Zea mays PE=2 SV=1 52 2e-05
tr|Q9LHA9|Q9LHA9_ARATH Genomic DNA, chromosome 3, BAC clone: T16... 52 2e-05
tr|Q5ZEI0|Q5ZEI0_ORYSJ cDNA clone:J023009J05, full insert sequen... 49 1e-04
tr|A2ZPB5|A2ZPB5_ORYSJ Putative uncharacterized protein OS=Oryza... 49 1e-04
tr|A2WKR0|A2WKR0_ORYSI Putative uncharacterized protein OS=Oryza... 49 1e-04
tr|B8A038|B8A038_MAIZE Putative uncharacterized protein OS=Zea m... 49 2e-04
tr|B6U1W7|B6U1W7_MAIZE SLT1 protein OS=Zea mays PE=2 SV=1 49 2e-04
tr|Q9LZ54|Q9LZ54_ARATH Putative uncharacterized protein T22P11_7... 46 0.001
tr|Q9C5N0|Q9C5N0_ARATH Putative uncharacterized protein At5g0248... 46 0.001

>tr|A9U0L8|A9U0L8_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_200096 PE=4 SV=1
Length = 489

Score = 62.4 bits (150), Expect = 1e-08
Identities = 26/34 (76%), Positives = 31/34 (91%)
Frame = -1

Query: 104 YEDEKGYLIMVSLPFTDIQRLRVSWLNTAAHGIV 3
YED+KGYL+MVSLPF D+QRLRVSW NTA HG++
Sbjct: 362 YEDDKGYLVMVSLPFIDMQRLRVSWRNTATHGVL 395


>tr|B6SV12|B6SV12_MAIZE SLT1 protein OS=Zea mays PE=2 SV=1
Length = 520

Score = 57.4 bits (137), Expect = 4e-07
Identities = 25/34 (73%), Positives = 29/34 (85%)
Frame = -1

Query: 104 YEDEKGYLIMVSLPFTDIQRLRVSWLNTAAHGIV 3
YED++GYLIMVSLPF D QR++VSW NT HGIV
Sbjct: 392 YEDDQGYLIMVSLPFVDQQRVKVSWRNTLTHGIV 425


>tr|Q9FQY3|Q9FQY3_TOBAC SLT1 protein OS=Nicotiana tabacum PE=2 SV=1
Length = 501

Score = 57.0 bits (136), Expect = 5e-07
Identities = 22/34 (64%), Positives = 30/34 (88%)
Frame = -1

Query: 104 YEDEKGYLIMVSLPFTDIQRLRVSWLNTAAHGIV 3
YED++GYLI++SLPF D+QR++VSW NT HGI+
Sbjct: 373 YEDDEGYLIIISLPFVDLQRVKVSWRNTLTHGII 406


>tr|Q10NA2|Q10NA2_ORYSJ SLT1 protein, putative, expressed (Putative
uncharacterized protein) OS=Oryza sativa subsp. japonica
GN=LOC_Os03g16910 PE=4 SV=1
Length = 539

Score = 56.2 bits (134), Expect = 8e-07
Identities = 24/34 (70%), Positives = 29/34 (85%)
Frame = -1

Query: 104 YEDEKGYLIMVSLPFTDIQRLRVSWLNTAAHGIV 3
YED KGYLI++SLPF DIQR++VSW NT +GIV
Sbjct: 415 YEDSKGYLIIISLPFADIQRVKVSWKNTLTNGIV 448


>tr|Q0DT06|Q0DT06_ORYSJ Os03g0277100 protein (Fragment) OS=Oryza
sativa subsp. japonica GN=Os03g0277100 PE=4 SV=1
Length = 242

Score = 56.2 bits (134), Expect = 8e-07
Identities = 24/34 (70%), Positives = 29/34 (85%)
Frame = -1

Query: 104 YEDEKGYLIMVSLPFTDIQRLRVSWLNTAAHGIV 3
YED KGYLI++SLPF DIQR++VSW NT +GIV
Sbjct: 118 YEDSKGYLIIISLPFADIQRVKVSWKNTLTNGIV 151


>tr|A2XF46|A2XF46_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_10988 PE=4 SV=1
Length = 451

Score = 56.2 bits (134), Expect = 8e-07
Identities = 24/34 (70%), Positives = 29/34 (85%)
Frame = -1

Query: 104 YEDEKGYLIMVSLPFTDIQRLRVSWLNTAAHGIV 3
YED KGYLI++SLPF DIQR++VSW NT +GIV
Sbjct: 327 YEDSKGYLIIISLPFADIQRVKVSWKNTLTNGIV 360


>tr|A7PNK9|A7PNK9_VITVI Chromosome chr8 scaffold_23, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00021302001
PE=4 SV=1
Length = 497

Score = 55.5 bits (132), Expect = 1e-06
Identities = 22/34 (64%), Positives = 29/34 (85%)
Frame = -1

Query: 104 YEDEKGYLIMVSLPFTDIQRLRVSWLNTAAHGIV 3
YED +GYLI++SLPF D+QR++VSW NT HGI+
Sbjct: 370 YEDVEGYLIIISLPFVDLQRVKVSWRNTLTHGII 403


>tr|A7NZ35|A7NZ35_VITVI Chromosome chr6 scaffold_3, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00024356001
PE=4 SV=1
Length = 500

Score = 55.5 bits (132), Expect = 1e-06
Identities = 21/34 (61%), Positives = 30/34 (88%)
Frame = -1

Query: 104 YEDEKGYLIMVSLPFTDIQRLRVSWLNTAAHGIV 3
YEDE+GYLI++SLPF D++R++V+W NT HG+V
Sbjct: 373 YEDEEGYLIIISLPFADLKRVKVTWWNTLTHGVV 406


>tr|Q943K6|Q943K6_ORYSJ cDNA clone:J023034F22, full insert sequence
OS=Oryza sativa subsp. japonica GN=P0031D11.42 PE=2 SV=1
Length = 521

Score = 54.7 bits (130), Expect = 2e-06
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = -1

Query: 104 YEDEKGYLIMVSLPFTDIQRLRVSWLNTAAHGIV 3
YED++GYLIMVSLPF D Q+++VSW N+ HGIV
Sbjct: 393 YEDDQGYLIMVSLPFVDQQKVKVSWRNSLTHGIV 426


>tr|A2WWU6|A2WWU6_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_04376 PE=4 SV=1
Length = 521

Score = 54.7 bits (130), Expect = 2e-06
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = -1

Query: 104 YEDEKGYLIMVSLPFTDIQRLRVSWLNTAAHGIV 3
YED++GYLIMVSLPF D Q+++VSW N+ HGIV
Sbjct: 393 YEDDQGYLIMVSLPFVDQQKVKVSWRNSLTHGIV 426