BP916236
Clone id YMU001_000084_H08
Library
Length 561
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000084_H08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CGAAGCCGAGAGGAAATCTGTGGACACCACCACCACCACCCCCACACCTTTTGGTTGCCA
CCTACTATGCCTAGGCGCAGAGCACTACCTCATTATTTATAACAGAATGGCGCAGTGACC
AACATCCAAAGGATTGACATGCATGTCACCTTCCCTACTAGAGGGGGCCAATATAGTGGA
TTTCATCATTGGGCAAGAGAGAAATCTCACTTGCTCACATCTTTCACACTTCCACTAGTA
CCATACCTAGATCTACCTTTCTATGGCTCATCCATCACTTACACAACACCCACATATACA
CTCCACCTTAACTTTACACATGAGCTAGCACTCTGTCTTACATGCATCAGTCATCAACAA
CTTTCCAAACACCACACTCAAGCTAGATAATCAAGTTGTATCCACTTCATGGGAACTTAC
CTTCAAACCATGCATTAGAATTAGAGGCTATGACTACATGGATAGAAAAGTGGTGGGACA
CAACTCTTTGAATATGTAATCTTTGATTAATGCAAATCTCTTCTATATGTGCTCCTACTT
CGTCTCTCTCTCTCTCTCTCT
■■Homology search results ■■ -
sp_hit_id Q28PL3
Definition sp|Q28PL3|CTAA_JANSC Heme A synthase OS=Jannaschia sp. (strain CCS1)
Align length 46
Score (bit) 31.6
E-value 2.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916236|Adiantum capillus-veneris mRNA, clone:
YMU001_000084_H08.
(561 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q28PL3|CTAA_JANSC Heme A synthase OS=Jannaschia sp. (strain C... 32 2.8
sp|Q50724|Y3401_MYCTU Uncharacterized glycosyl hydrolase Rv3401/... 31 4.7
sp|O60107|SNX41_SCHPO Sorting nexin-41 OS=Schizosaccharomyces po... 31 4.7
sp|Q49736|Y392_MYCLE Uncharacterized glycosyl hydrolase ML0392 O... 30 6.2
sp|P75441|Y337_MYCPN Uncharacterized protein MG241 homolog OS=My... 30 6.2
sp|O27880|IORA_METTH Indolepyruvate oxidoreductase subunit iorA ... 30 6.3
sp|P57646|Y586_BUCAI UPF0341 protein BU586 OS=Buchnera aphidicol... 30 8.2

>sp|Q28PL3|CTAA_JANSC Heme A synthase OS=Jannaschia sp. (strain
CCS1) GN=ctaA PE=3 SV=1
Length = 379

Score = 31.6 bits (70), Expect = 2.8
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -2

Query: 170 WPPLVGKVTCMSILWMLVTAPFCYK**GSALRLGIVGGNQKVWGWW 33
W +G V + + +L T G L LG++GG Q V GWW
Sbjct: 121 WARFLGVVWAVGFVGLLATKSVPVGWTGRLLLLGVLGGLQGVAGWW 166


>sp|Q50724|Y3401_MYCTU Uncharacterized glycosyl hydrolase
Rv3401/MT3509 OS=Mycobacterium tuberculosis GN=Rv3401
PE=3 SV=1
Length = 786

Score = 30.8 bits (68), Expect = 4.7
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2

Query: 335 VLHASVINNFPNTTLKLDNQVVSTSWEL-TFKPCIRIRGYDYMDRKVVGHNSLN 493
+LH + + +P +K + V++ W+ F P + R DY +R++V +SL+
Sbjct: 575 LLHEAYVRLYPAQVIKQADLVLAMQWQSHAFTPEQKARNVDYYERRMVRDSSLS 628


>sp|O60107|SNX41_SCHPO Sorting nexin-41 OS=Schizosaccharomyces pombe
GN=snx41 PE=1 SV=1
Length = 586

Score = 30.8 bits (68), Expect = 4.7
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = +2

Query: 137 TCMSPSLLEGANIVDFIIGQERNLTCSHLSHFH*YHT*IYLSMA--HPSLTQHPHIHSTL 310
TC+ P L + I+D++I +N S + ++L HP L L
Sbjct: 120 TCLVPPLPDKHKIMDYLINVTKNQRMSRMLEERKRLLQLFLRRVAQHPILGLSEVFRKFL 179

Query: 311 TLHMS*HSVLHASVINNFPNTTLK 382
+ H+S VLH+ I+ P LK
Sbjct: 180 SRHVSWKEVLHSPPISCLPKDLLK 203


>sp|Q49736|Y392_MYCLE Uncharacterized glycosyl hydrolase ML0392
OS=Mycobacterium leprae GN=ML0392 PE=3 SV=1
Length = 792

Score = 30.4 bits (67), Expect = 6.2
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2

Query: 338 LHASVINNFPNTTLKLDNQVVSTSWEL-TFKPCIRIRGYDYMDRKVVGHNSLN 493
LH + + +P +K + V++ W+ F P + R DY +R++V +SL+
Sbjct: 576 LHEAYVRLYPAQVIKQADLVLAMQWQSHAFTPEQKARNVDYYERRMVRDSSLS 628


>sp|P75441|Y337_MYCPN Uncharacterized protein MG241 homolog
OS=Mycoplasma pneumoniae GN=MPN_337 PE=4 SV=1
Length = 621

Score = 30.4 bits (67), Expect = 6.2
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Frame = +2

Query: 347 SVINNFPNTTLKLDNQVVSTSWELTFKPCIRIRGYDYMDRKVVGHNSLNM*SLINAN--- 517
S++NN K + + + W +T+ I ++ +DY K+ N N SL+ +N
Sbjct: 437 SIVNN------KFKSAIHNIVWTITYSKAIMLKAFDY--SKIFEQNRTNDPSLLRSNLNS 488

Query: 518 ---LFYMCSYFVSLSL 556
L Y+ YF + S+
Sbjct: 489 INRLRYLSEYFRTASV 504


>sp|O27880|IORA_METTH Indolepyruvate oxidoreductase subunit iorA
OS=Methanobacterium thermoautotrophicum GN=iorA PE=3
SV=1
Length = 618

Score = 30.4 bits (67), Expect = 6.3
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -1

Query: 231 KCERC-EQVRFLSCPMMKSTILAPSSREGDMHVNPLDVGHCAILL 100
KC+ C E +R L+CP M + REG++ ++PL C++ L
Sbjct: 567 KCDLCLECIRDLACPAMVT-------REGEVFIDPLKCRGCSVCL 604


>sp|P57646|Y586_BUCAI UPF0341 protein BU586 OS=Buchnera aphidicola
subsp. Acyrthosiphon pisum GN=BU586 PE=3 SV=1
Length = 246

Score = 30.0 bits (66), Expect = 8.2
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +1

Query: 160 RGGQYSGFHHWAREKSHLLTSFTLPLVPYLDLPFYGSSITYTTPTYTLH 306
RG Q HW + + HL+ + +L + L++P + Y P Y H
Sbjct: 130 RGYQDKKIGHWLQTRLHLIVNDSLKM---LEIPILQPDVIYLDPMYPFH 175


tr_hit_id A2Z2X6
Definition tr|A2Z2X6|A2Z2X6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica
Align length 7
Score (bit) 28.5
E-value 1.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916236|Adiantum capillus-veneris mRNA, clone:
YMU001_000084_H08.
(561 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A2Z2X6|A2Z2X6_ORYSI Putative uncharacterized protein OS=Oryza... 28 1.8
tr|Q4D6J3|Q4D6J3_TRYCR Trans-sialidase, putative OS=Trypanosoma ... 35 2.8
tr|B5MDL8|B5MDL8_HUMAN Putative uncharacterized protein FAM169B ... 34 4.7
tr|B3S460|B3S460_TRIAD Putative uncharacterized protein OS=Trich... 34 4.8
tr|Q7SGS5|Q7SGS5_NEUCR Putative uncharacterized protein OS=Neuro... 27 5.0

>tr|A2Z2X6|A2Z2X6_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_31969 PE=4 SV=1
Length = 320

Score = 28.5 bits (62), Expect(2) = 1.8
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = -2

Query: 44 WGWWWWC 24
W WWWWC
Sbjct: 8 WWWWWWC 14



Score = 26.2 bits (56), Expect(2) = 1.8
Identities = 5/7 (71%), Positives = 6/7 (85%)
Frame = -2

Query: 47 VWGWWWW 27
+W WWWW
Sbjct: 3 IWWWWWW 9


>tr|Q4D6J3|Q4D6J3_TRYCR Trans-sialidase, putative OS=Trypanosoma
cruzi GN=Tc00.1047053507819.30 PE=4 SV=1
Length = 787

Score = 35.0 bits (79), Expect = 2.8
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 10/85 (11%)
Frame = +1

Query: 94 YL*QNGAVTNIQRID--MHVTFPTRGGQYSGFHHWAREKSH--------LLTSFTLPLVP 243
YL N VTN +++D + +T P G + + WA H L+ S T+ P
Sbjct: 509 YLCLNATVTNAKKVDDGLQLTEPGSGAMWP-VNTWANNVRHVSLSHNFTLVASVTIEEAP 567

Query: 244 YLDLPFYGSSITYTTPTYTLHLNFT 318
D P G+ + T T+T+ + +T
Sbjct: 568 TADAPLLGAILGETNSTHTMGILYT 592


>tr|B5MDL8|B5MDL8_HUMAN Putative uncharacterized protein FAM169B
(Fragment) OS=Homo sapiens GN=FAM169B PE=4 SV=1
Length = 246

Score = 34.3 bits (77), Expect = 4.7
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2

Query: 218 HLSHFH*YHT*IYLSMAHPSLTQHPHIHSTLTLHMS*H-SVLHASVIN 358
HLS H+ IY S+ PS HP IH +H S H S+LH S I+
Sbjct: 76 HLSIPPSIHSSIYPSIIRPSSIHHPSIHPPSIIHPSIHPSILHPSSIH 123


>tr|B3S460|B3S460_TRIAD Putative uncharacterized protein
OS=Trichoplax adhaerens GN=TRIADDRAFT_58964 PE=4 SV=1
Length = 398

Score = 34.3 bits (77), Expect = 4.8
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1

Query: 214 LTSFTLPLVPYLDLPFYGSSITYTTPTYTLHL 309
+ ++ LP +P L +SIT+T PT+TLHL
Sbjct: 195 IVAYMLPAIPCFGLALLLTSITFTDPTFTLHL 226


>tr|Q7SGS5|Q7SGS5_NEUCR Putative uncharacterized protein
OS=Neurospora crassa GN=NCU08337 PE=4 SV=1
Length = 368

Score = 26.9 bits (58), Expect(2) = 5.0
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = -2

Query: 44 WGWWWWCP 21
W WWWW P
Sbjct: 310 WWWWWWWP 317



Score = 26.2 bits (56), Expect(2) = 5.0
Identities = 6/11 (54%), Positives = 6/11 (54%)
Frame = -2

Query: 59 GNQKVWGWWWW 27
G W WWWW
Sbjct: 306 GESSWWWWWWW 316