BP916239
Clone id YMU001_000084_H11
Library
Length 389
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000084_H11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTGTTCGTTGGAAATAAAAACTTGTGGAAACTTCTTTTCCCCATTCCTCCTAAATATGTA
CAATACCCCCATATTAGCTAGCTATCAAGTGGAGGGCAAGATTACGAGGAGGCTACATTA
TTGTTTACCACATTGCCCTATTGCATATACAAGGCCCTTGGGTACAAAGCATTCAAAAAG
TTGTTCAAAAGCATGTGCACTGCGTCCTACGCATTCACCACCACTCCACCGTTAGGATGA
AGAAACTGGCCAGTGTAGTATGAAGCATCCTCGGAGGCCAGGAAGACATAGGAAGGCCCA
ATCTCAGATGGCTGTGCAGCCCTCTTCATAGGAACTTCATCTCCAAAGCTCTCCACCTTC
TCCCCGGAAAATGAGGAAGGGATGAGAGG
■■Homology search results ■■ -
sp_hit_id Q5KTS5
Definition sp|Q5KTS5|GRDH_DAUCA Glucose and ribitol dehydrogenase OS=Daucus carota
Align length 52
Score (bit) 78.2
E-value 1.0e-14
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916239|Adiantum capillus-veneris mRNA, clone:
YMU001_000084_H11.
(389 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5KTS5|GRDH_DAUCA Glucose and ribitol dehydrogenase OS=Daucus... 78 1e-14
sp|Q75KH3|GRDH_ORYSJ Glucose and ribitol dehydrogenase homolog O... 77 2e-14
sp|Q9MA93|GRDH2_ARATH Glucose and ribitol dehydrogenase homolog ... 75 8e-14
sp|Q9FZ42|GRDH1_ARATH Glucose and ribitol dehydrogenase homolog ... 75 1e-13
sp|P40397|YHXC_BACSU Uncharacterized oxidoreductase yhxC OS=Baci... 69 6e-12
sp|O07575|YHDF_BACSU Uncharacterized oxidoreductase yhdF OS=Baci... 55 8e-08
sp|Q10216|YAY8_SCHPO Uncharacterized oxidoreductase C4H3.08 OS=S... 55 8e-08
sp|P80873|GS39_BACSU General stress protein 39 OS=Bacillus subti... 55 8e-08
sp|P0AG84|YGHA_ECOLI Uncharacterized oxidoreductase yghA OS=Esch... 52 1e-06
sp|P0AG85|YGHA_ECO57 Uncharacterized oxidoreductase yghA OS=Esch... 52 1e-06
sp|P40398|YHXD_BACSU Uncharacterized oxidoreductase yhxD OS=Baci... 40 0.004
sp|P17611|NODG_AZOBR Nodulation protein G OS=Azospirillum brasil... 40 0.004
sp|P57432|FABG_BUCAI 3-oxoacyl-[acyl-carrier-protein] reductase ... 40 0.004
sp|Q8K9J5|FABG_BUCAP 3-oxoacyl-[acyl-carrier-protein] reductase ... 39 0.006
sp|P50167|ARDH_PICST D-arabinitol 2-dehydrogenase [ribulose-form... 39 0.006
sp|P66782|Y1385_MYCBO Uncharacterized oxidoreductase Mb1385 OS=M... 39 0.011
sp|P66781|Y1350_MYCTU Uncharacterized oxidoreductase Rv1350/MT13... 39 0.011
sp|Q89AG9|FABG_BUCBP 3-oxoacyl-[acyl-carrier-protein] reductase ... 38 0.014
sp|P51831|FABG_BACSU 3-oxoacyl-[acyl-carrier-protein] reductase ... 38 0.014
sp|P50165|TRNH_DATST Tropinone reductase homolog OS=Datura stram... 38 0.018
sp|Q8CQD2|BUTA_STAES Acetoin(diacetyl) reductase OS=Staphylococc... 37 0.024
sp|Q5HKG6|BUTA_STAEQ Acetoin(diacetyl) reductase OS=Staphylococc... 37 0.024
sp|Q99MZ7|PECR_MOUSE Peroxisomal trans-2-enoyl-CoA reductase OS=... 37 0.031
sp|Q8CPI3|FABG_STAES 3-oxoacyl-[acyl-carrier-protein] reductase ... 37 0.031
sp|Q5HPW0|FABG_STAEQ 3-oxoacyl-[acyl-carrier-protein] reductase ... 37 0.031
sp|O67610|FABG_AQUAE 3-oxoacyl-[acyl-carrier-protein] reductase ... 37 0.031
sp|P43066|ARDH_CANAL D-arabinitol 2-dehydrogenase [ribulose-form... 37 0.031
sp|P39644|YWFH_BACSU Bacilysin biosynthesis oxidoreductase ywfH ... 37 0.040
sp|P37440|UCPA_ECOLI Oxidoreductase ucpA OS=Escherichia coli (st... 37 0.040
sp|P55336|FABG_VIBHA 3-oxoacyl-[acyl-carrier-protein] reductase ... 37 0.040

>sp|Q5KTS5|GRDH_DAUCA Glucose and ribitol dehydrogenase OS=Daucus
carota GN=CAISE5 PE=2 SV=1
Length = 291

Score = 78.2 bits (191), Expect = 1e-14
Identities = 37/52 (71%), Positives = 42/52 (80%)
Frame = -1

Query: 389 PLIPSSFSGEKVESFGDEVPMKRAAQPSEIGPSYVFLASEDASYYTGQFLHP 234
PLIPSSF E+V+ FG EVPMKRA QP EI +YVFLAS D+SYY+GQ LHP
Sbjct: 232 PLIPSSFDEEEVKQFGSEVPMKRAGQPYEIATAYVFLASCDSSYYSGQVLHP 283


>sp|Q75KH3|GRDH_ORYSJ Glucose and ribitol dehydrogenase homolog
OS=Oryza sativa subsp. japonica GN=Os05g0140800 PE=2
SV=2
Length = 300

Score = 77.4 bits (189), Expect = 2e-14
Identities = 35/51 (68%), Positives = 42/51 (82%)
Frame = -1

Query: 389 PLIPSSFSGEKVESFGDEVPMKRAAQPSEIGPSYVFLASEDASYYTGQFLH 237
PLIP+SF+ EKV FG +VPM RA QPSE+ PS+VFLAS+DASY +GQ LH
Sbjct: 241 PLIPASFAEEKVRQFGSQVPMGRAGQPSEVAPSFVFLASDDASYMSGQMLH 291


>sp|Q9MA93|GRDH2_ARATH Glucose and ribitol dehydrogenase homolog 2
OS=Arabidopsis thaliana GN=At3g05260 PE=2 SV=1
Length = 289

Score = 75.5 bits (184), Expect = 8e-14
Identities = 36/53 (67%), Positives = 42/53 (79%), Gaps = 1/53 (1%)
Frame = -1

Query: 389 PLIPSSFSGEKVESFGDEVPMKRAAQPSEIGPSYVFLA-SEDASYYTGQFLHP 234
PLIP+SFS E ++ FG E PMKRAAQP E+ PSYVFLA + +SYYTGQ LHP
Sbjct: 229 PLIPASFSEEAIKQFGSETPMKRAAQPVEVAPSYVFLACNHCSSYYTGQILHP 281


>sp|Q9FZ42|GRDH1_ARATH Glucose and ribitol dehydrogenase homolog 1
OS=Arabidopsis thaliana GN=At1g54870 PE=1 SV=1
Length = 288

Score = 75.1 bits (183), Expect = 1e-13
Identities = 35/53 (66%), Positives = 44/53 (83%), Gaps = 1/53 (1%)
Frame = -1

Query: 389 PLIPSSFSGEKVESFGDEVPMKRAAQPSEIGPSYVFLA-SEDASYYTGQFLHP 234
PLIP+SF+ EK+++FG EVPMKRA QP E+ PSYVFLA + +SY+TGQ LHP
Sbjct: 228 PLIPASFNEEKIKNFGSEVPMKRAGQPIEVAPSYVFLACNHCSSYFTGQVLHP 280


>sp|P40397|YHXC_BACSU Uncharacterized oxidoreductase yhxC
OS=Bacillus subtilis GN=yhxC PE=3 SV=2
Length = 285

Score = 69.3 bits (168), Expect = 6e-12
Identities = 29/51 (56%), Positives = 41/51 (80%)
Frame = -1

Query: 389 PLIPSSFSGEKVESFGDEVPMKRAAQPSEIGPSYVFLASEDASYYTGQFLH 237
PLIP+SF+ + VE FG +VPM+R QP E+ PSY++LAS+D++Y TGQ +H
Sbjct: 226 PLIPASFAAKDVEVFGSDVPMERPGQPVEVAPSYLYLASDDSTYVTGQTIH 276


>sp|O07575|YHDF_BACSU Uncharacterized oxidoreductase yhdF
OS=Bacillus subtilis GN=yhdF PE=3 SV=1
Length = 289

Score = 55.5 bits (132), Expect = 8e-08
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = -1

Query: 389 PLIPSSFSGEKVESFGDEVPMKRAAQPSEIGPSYVFLASEDASYYTGQFLH 237
PLIP++F EKV+ G + PM R QP E +YV LAS+++SY TGQ +H
Sbjct: 230 PLIPATFPEEKVKQHGLDTPMGRPGQPVEHAGAYVLLASDESSYMTGQTIH 280


>sp|Q10216|YAY8_SCHPO Uncharacterized oxidoreductase C4H3.08
OS=Schizosaccharomyces pombe GN=SPAC4H3.08 PE=2 SV=1
Length = 286

Score = 55.5 bits (132), Expect = 8e-08
Identities = 26/52 (50%), Positives = 33/52 (63%)
Frame = -1

Query: 389 PLIPSSFSGEKVESFGDEVPMKRAAQPSEIGPSYVFLASEDASYYTGQFLHP 234
PL+ S+F EK+E D+VP+ R QP E+ Y+FLA D Y TGQ LHP
Sbjct: 228 PLVSSTFPKEKIE-LSDQVPLGRMGQPVEVASCYLFLACSDGGYMTGQTLHP 278


>sp|P80873|GS39_BACSU General stress protein 39 OS=Bacillus subtilis
GN=ydaD PE=1 SV=3
Length = 286

Score = 55.5 bits (132), Expect = 8e-08
Identities = 27/51 (52%), Positives = 33/51 (64%)
Frame = -1

Query: 389 PLIPSSFSGEKVESFGDEVPMKRAAQPSEIGPSYVFLASEDASYYTGQFLH 237
PLIP++F E V FG + PM R QP E YV LAS+++SY TGQ LH
Sbjct: 227 PLIPATFPEETVAQFGQDTPMGRPGQPVEHVGCYVLLASDESSYMTGQTLH 277


>sp|P0AG84|YGHA_ECOLI Uncharacterized oxidoreductase yghA
OS=Escherichia coli (strain K12) GN=yghA PE=1 SV=1
Length = 294

Score = 51.6 bits (122), Expect = 1e-06
Identities = 20/39 (51%), Positives = 30/39 (76%)
Frame = -1

Query: 362 EKVESFGDEVPMKRAAQPSEIGPSYVFLASEDASYYTGQ 246
+K+ FG + PMKRA QP+E+ P YV+LAS+++SY T +
Sbjct: 245 DKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAE 283


>sp|P0AG85|YGHA_ECO57 Uncharacterized oxidoreductase yghA
OS=Escherichia coli O157:H7 GN=yghA PE=3 SV=1
Length = 294

Score = 51.6 bits (122), Expect = 1e-06
Identities = 20/39 (51%), Positives = 30/39 (76%)
Frame = -1

Query: 362 EKVESFGDEVPMKRAAQPSEIGPSYVFLASEDASYYTGQ 246
+K+ FG + PMKRA QP+E+ P YV+LAS+++SY T +
Sbjct: 245 DKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAE 283


tr_hit_id Q9SQG0
Definition tr|Q9SQG0|Q9SQG0_CERRI Dormancy protein 1 OS=Ceratopteris richardii
Align length 52
Score (bit) 90.1
E-value 5.0e-17
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916239|Adiantum capillus-veneris mRNA, clone:
YMU001_000084_H11.
(389 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9SQG0|Q9SQG0_CERRI Dormancy protein 1 OS=Ceratopteris richar... 90 5e-17
tr|Q1IW02|Q1IW02_DEIGD Short-chain dehydrogenase/reductase SDR O... 83 6e-15
tr|Q9SQG1|Q9SQG1_CERRI Dormancy protein 2 OS=Ceratopteris richar... 83 8e-15
tr|B4AYA6|B4AYA6_9CHRO Short-chain dehydrogenase/reductase SDR O... 82 1e-14
tr|Q8YLW4|Q8YLW4_ANASP Oxidoreductase OS=Anabaena sp. (strain PC... 82 2e-14
tr|B1ZWK9|B1ZWK9_OPITP Short-chain dehydrogenase/reductase SDR O... 82 2e-14
tr|Q3MAE1|Q3MAE1_ANAVT Short-chain dehydrogenase/reductase SDR O... 81 3e-14
tr|B2J124|B2J124_NOSP7 Short-chain dehydrogenase/reductase SDR O... 80 4e-14
tr|A9RE07|A9RE07_PHYPA Predicted protein OS=Physcomitrella paten... 80 4e-14
tr|B7KJR4|B7KJR4_9CHRO Short-chain dehydrogenase/reductase SDR O... 80 5e-14
tr|A0ZKB6|A0ZKB6_NODSP Oxidoreductase OS=Nodularia spumigena CCY... 78 2e-13
tr|Q0DKV9|Q0DKV9_ORYSJ Os05g0140800 protein OS=Oryza sativa subs... 77 3e-13
tr|A3AZT5|A3AZT5_ORYSJ Putative uncharacterized protein OS=Oryza... 77 3e-13
tr|A2Y087|A2Y087_ORYSI Putative uncharacterized protein OS=Oryza... 77 3e-13
tr|B4FNZ9|B4FNZ9_MAIZE General stress protein 39 OS=Zea mays PE=... 77 6e-13
tr|Q6MCM3|Q6MCM3_PARUW Probable putative oxidoreductases OS=Prot... 76 7e-13
tr|Q11SR1|Q11SR1_CYTH3 Short-chain dehydrogenase/reductase, prob... 76 7e-13
tr|B8HQX7|B8HQX7_9CHRO Short-chain dehydrogenase/reductase SDR O... 76 7e-13
tr|A2U637|A2U637_BACCO Short-chain dehydrogenase/reductase SDR O... 76 7e-13
tr|B1X0R0|B1X0R0_CYAA5 Probable short-chain dehydrogenase/reduct... 76 1e-12
tr|B2EUB8|B2EUB8_9BACT Short-chain dehydrogenase/reductase SDR O... 75 2e-12
tr|B2HY96|B2HY96_ACIBC Dehydrogenase with different specificitie... 74 3e-12
tr|B0VBH3|B0VBH3_ACIBY Putative Short-chain dehydrogenase/reduct... 74 3e-12
tr|A3M4H1|A3M4H1_ACIBT Oxidoreductase OS=Acinetobacter baumannii... 74 3e-12
tr|B7H455|B7H455_ACIBA Short chain dehydrogenase family protein ... 74 3e-12
tr|Q8XH87|Q8XH87_CLOPE Oxidoreductase OS=Clostridium perfringens... 74 4e-12
tr|Q8CXK2|Q8CXK2_OCEIH Oxidoreductase (Short-chain dehydrogenase... 74 4e-12
tr|Q2Y9T8|Q2Y9T8_NITMU Short-chain dehydrogenase/reductase SDR O... 74 4e-12
tr|A9AYM7|A9AYM7_HERA2 Short-chain dehydrogenase/reductase SDR O... 74 4e-12
tr|B4WHS1|B4WHS1_9SYNE Oxidoreductase, short chain dehydrogenase... 74 4e-12

>tr|Q9SQG0|Q9SQG0_CERRI Dormancy protein 1 OS=Ceratopteris richardii
GN=Dorm1 PE=2 SV=1
Length = 172

Score = 90.1 bits (222), Expect = 5e-17
Identities = 42/52 (80%), Positives = 47/52 (90%)
Frame = -1

Query: 389 PLIPSSFSGEKVESFGDEVPMKRAAQPSEIGPSYVFLASEDASYYTGQFLHP 234
PL+ SSF EKVESFG++VPMKRA QPSEIGPSYVFLASED+SYY+GQ LHP
Sbjct: 113 PLMXSSFPPEKVESFGEQVPMKRAGQPSEIGPSYVFLASEDSSYYSGQVLHP 164


>tr|Q1IW02|Q1IW02_DEIGD Short-chain dehydrogenase/reductase SDR
OS=Deinococcus geothermalis (strain DSM 11300)
GN=Dgeo_2288 PE=3 SV=1
Length = 306

Score = 83.2 bits (204), Expect = 6e-15
Identities = 37/52 (71%), Positives = 44/52 (84%)
Frame = -1

Query: 389 PLIPSSFSGEKVESFGDEVPMKRAAQPSEIGPSYVFLASEDASYYTGQFLHP 234
PLIPS+F +KVESFG +VP+KR QP+E+ PSYVFLASED+SY TGQ LHP
Sbjct: 247 PLIPSTFDQQKVESFGQDVPLKRPGQPAEVAPSYVFLASEDSSYMTGQVLHP 298


>tr|Q9SQG1|Q9SQG1_CERRI Dormancy protein 2 OS=Ceratopteris richardii
GN=Dorm2 PE=4 SV=1
Length = 120

Score = 82.8 bits (203), Expect = 8e-15
Identities = 37/52 (71%), Positives = 45/52 (86%)
Frame = -1

Query: 389 PLIPSSFSGEKVESFGDEVPMKRAAQPSEIGPSYVFLASEDASYYTGQFLHP 234
PLIPSSF EKV+SFG++ P+K+A PS IGPSY FLAS+D+SYY+GQFLHP
Sbjct: 61 PLIPSSFPPEKVKSFGEQFPIKKAGXPSXIGPSYXFLASKDSSYYSGQFLHP 112


>tr|B4AYA6|B4AYA6_9CHRO Short-chain dehydrogenase/reductase SDR
OS=Cyanothece sp. PCC 7822 GN=Cyan7822DRAFT_1833 PE=4
SV=1
Length = 286

Score = 82.4 bits (202), Expect = 1e-14
Identities = 37/52 (71%), Positives = 44/52 (84%)
Frame = -1

Query: 389 PLIPSSFSGEKVESFGDEVPMKRAAQPSEIGPSYVFLASEDASYYTGQFLHP 234
PLIPS+F EKVESFG +VPM+R AQP E+ PSYVFLAS D+SY++GQ LHP
Sbjct: 227 PLIPSTFPEEKVESFGAQVPMQRPAQPDEVAPSYVFLASNDSSYFSGQILHP 278


>tr|Q8YLW4|Q8YLW4_ANASP Oxidoreductase OS=Anabaena sp. (strain PCC
7120) GN=alr5182 PE=3 SV=1
Length = 285

Score = 81.6 bits (200), Expect = 2e-14
Identities = 36/52 (69%), Positives = 44/52 (84%)
Frame = -1

Query: 389 PLIPSSFSGEKVESFGDEVPMKRAAQPSEIGPSYVFLASEDASYYTGQFLHP 234
PLIPS+F EKVE+FG +VPM+RA QP E+ PSYVFLAS+D+SY +GQ LHP
Sbjct: 226 PLIPSTFPAEKVETFGKQVPMQRAGQPEEVAPSYVFLASDDSSYMSGQVLHP 277


>tr|B1ZWK9|B1ZWK9_OPITP Short-chain dehydrogenase/reductase SDR
OS=Opitutus terrae (strain DSM 11246 / PB90-1)
GN=Oter_0042 PE=4 SV=1
Length = 282

Score = 81.6 bits (200), Expect = 2e-14
Identities = 37/52 (71%), Positives = 43/52 (82%)
Frame = -1

Query: 389 PLIPSSFSGEKVESFGDEVPMKRAAQPSEIGPSYVFLASEDASYYTGQFLHP 234
PLIP++FS EKV SFG +VPMKRA +P E+ P YVFLASE+ASY TGQ LHP
Sbjct: 223 PLIPATFSKEKVASFGSDVPMKRAGEPEEVAPCYVFLASEEASYITGQVLHP 274


>tr|Q3MAE1|Q3MAE1_ANAVT Short-chain dehydrogenase/reductase SDR
OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937)
GN=Ava_2428 PE=3 SV=1
Length = 285

Score = 80.9 bits (198), Expect = 3e-14
Identities = 36/52 (69%), Positives = 44/52 (84%)
Frame = -1

Query: 389 PLIPSSFSGEKVESFGDEVPMKRAAQPSEIGPSYVFLASEDASYYTGQFLHP 234
PLIPS+F EKVE+FG +VPM+RA QP E+ PSYVFLAS+D+SY +GQ LHP
Sbjct: 226 PLIPSTFPTEKVETFGKQVPMQRAGQPEEVAPSYVFLASDDSSYMSGQVLHP 277


>tr|B2J124|B2J124_NOSP7 Short-chain dehydrogenase/reductase SDR
OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102)
GN=Npun_F3466 PE=4 SV=1
Length = 312

Score = 80.5 bits (197), Expect = 4e-14
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -1

Query: 389 PLIPSSFSGEKVESFGDEVPMKRAAQPSEIGPSYVFLASEDASYYTGQFLH 237
PLIPS+F EKVESFG +VPM+RA QP E+ PSYVFLAS+DASY +GQ LH
Sbjct: 253 PLIPSTFPEEKVESFGKQVPMQRAGQPEEVAPSYVFLASDDASYVSGQVLH 303


>tr|A9RE07|A9RE07_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_112232 PE=3 SV=1
Length = 302

Score = 80.5 bits (197), Expect = 4e-14
Identities = 37/52 (71%), Positives = 42/52 (80%)
Frame = -1

Query: 389 PLIPSSFSGEKVESFGDEVPMKRAAQPSEIGPSYVFLASEDASYYTGQFLHP 234
PLIPSSF EK E FG +VPM RA +P+EI SYVFLASED+SY+TGQ LHP
Sbjct: 230 PLIPSSFPAEKTEKFGSQVPMGRAGEPAEIATSYVFLASEDSSYFTGQTLHP 281


>tr|B7KJR4|B7KJR4_9CHRO Short-chain dehydrogenase/reductase SDR
OS=Cyanothece sp. PCC 7424 GN=PCC7424_1059 PE=4 SV=1
Length = 284

Score = 80.1 bits (196), Expect = 5e-14
Identities = 36/52 (69%), Positives = 43/52 (82%)
Frame = -1

Query: 389 PLIPSSFSGEKVESFGDEVPMKRAAQPSEIGPSYVFLASEDASYYTGQFLHP 234
PLIP++F +KVESFG +VPM+RA QP E+ SYVFLAS DASY+TGQ LHP
Sbjct: 225 PLIPATFPEDKVESFGAQVPMQRAGQPEEVASSYVFLASNDASYFTGQILHP 276