BP916240 |
Clone id |
YMU001_000085_A01 |
Library |
YMU01 |
Length |
361 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000085_A01. |
Accession |
BP916240 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CATAAGTACGTAGGCACCTGCCTTCTAGTCATCCGGTGCGACGACATTATCGAAGCAATG CCTTCCAACTCCCACATCGTGGTGCGCATTGCAGTGAGAAAGTAAAGATGTCCAACCAAT GGTATCAAATCCGCATGGCGTGCATCGAAGCAAGTCCACTGCTTCCTTCAAATGCCCAGC GTTACCAAGAAGGTCCACCATACAATTAAAATGATCCTCAGACGGTGTGATCTTTGTATT TCTCATTGCTTCAAAGTGTTCACAACCCTCACTTAAAAGGTTTTCTCGACTGCATGCGGA GAGAATGCTAACCAGAGTCACGTTATCTGGTTTCCAACCCTCCTCTTGCATGTCCTGATA G |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SIT7 |
Definition |
sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana |
Align length |
121 |
Score (bit) |
97.8 |
E-value |
1.0e-20 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916240|Adiantum capillus-veneris mRNA, clone: YMU001_000085_A01. (361 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protei... 98 1e-20 sp|Q9LS72|PP261_ARATH Pentatricopeptide repeat-containing protei... 92 8e-19 sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containi... 91 2e-18 sp|Q9SVH0|PP329_ARATH Pentatricopeptide repeat-containing protei... 90 3e-18 sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protei... 90 3e-18 sp|Q9LXY5|PP284_ARATH Pentatricopeptide repeat-containing protei... 89 5e-18 sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protei... 89 5e-18 sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protei... 89 7e-18 sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protei... 88 1e-17 sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containi... 87 2e-17 sp|O64766|PP185_ARATH Pentatricopeptide repeat-containing protei... 87 3e-17 sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protei... 86 4e-17 sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protei... 86 6e-17 sp|Q9LSL8|PP446_ARATH Pentatricopeptide repeat-containing protei... 86 8e-17 sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protei... 86 8e-17 sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protei... 86 8e-17 sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protei... 86 8e-17 sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protei... 85 1e-16 sp|Q9FMA1|PP433_ARATH Pentatricopeptide repeat-containing protei... 84 2e-16 sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protei... 84 2e-16 sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protei... 84 3e-16 sp|Q9C6T2|PPR68_ARATH Pentatricopeptide repeat-containing protei... 83 4e-16 sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protei... 83 4e-16 sp|Q9LND4|PPR14_ARATH Pentatricopeptide repeat-containing protei... 83 4e-16 sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protei... 83 4e-16 sp|Q9LRV9|PP228_ARATH Pentatricopeptide repeat-containing protei... 82 6e-16 sp|Q9FIF7|PP435_ARATH Putative pentatricopeptide repeat-containi... 82 1e-15 sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protei... 82 1e-15 sp|Q9FNN7|PP371_ARATH Pentatricopeptide repeat-containing protei... 81 1e-15 sp|Q9C9I6|PP116_ARATH Pentatricopeptide repeat-containing protei... 81 1e-15
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN=PCMP-E76 PE=2 SV=1 Length = 697
Score = 97.8 bits (242), Expect = 1e-20 Identities = 44/121 (36%), Positives = 75/121 (61%), Gaps = 1/121 (0%) Frame = -2
Query: 360 YQDMQEEGWKPDNVTLVSILSACSRENLLSEGCEHFEAM-RNTKITPSEDHFNCMVDLLG 184 +++M E G KPD++T++ +LSAC + EG +F +M R+ + P DH+ CMVDLLG Sbjct: 481 FREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLG 540
Query: 183 NAGHLKEAVDLLRCTPCGFDTIGWTSLLSHCNAHHDVGVGRHCFDNVVAPDD*KAGAYVL 4 AG L+EA ++ P D++ W SLL+ C H ++ +G++ + ++ + +G YVL Sbjct: 541 RAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVL 600
Query: 3 M 1 + Sbjct: 601 L 601
Score = 41.6 bits (96), Expect = 0.001 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 1/89 (1%) Frame = -2
Query: 360 YQDMQEEGWKPDNVTLVSILSACSRENLLSEGCE-HFEAMRNTKITPSEDHFNCMVDLLG 184 +Q M E +PD VTL S++SAC+ + + G E H ++N K+ N VD+ Sbjct: 241 FQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYA 300
Query: 183 NAGHLKEAVDLLRCTPCGFDTIGWTSLLS 97 +KEA + P + I TS++S Sbjct: 301 KCSRIKEARFIFDSMPIR-NVIAETSMIS 328
Score = 30.0 bits (66), Expect = 3.8 Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 6/91 (6%) Frame = -2
Query: 351 MQEEGWKPDNVTLVSILSACSRENLLSEGCEHFEAMRNTKITPSEDHFNCMVDLLGNAGH 172 M +EG+ + + S+LSACS N +++G + + + + +VD+ G+ Sbjct: 143 MHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGN 202
Query: 171 LKEAVDLLRCTPCGFDTIG------WTSLLS 97 + +A + FD +G W SL++ Sbjct: 203 VNDAQRV-------FDEMGDRNVVSWNSLIT 226
>sp|Q9LS72|PP261_ARATH Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1 Length = 600
Score = 92.0 bits (227), Expect = 8e-19 Identities = 41/121 (33%), Positives = 70/121 (57%), Gaps = 1/121 (0%) Frame = -2
Query: 360 YQDMQEEGWKPDNVTLVSILSACSRENLLSEGCEHFEAMRNT-KITPSEDHFNCMVDLLG 184 + M+ EG +PD VT +++L +C+ L+ EG ++F +M + P +H+ C+VDLLG Sbjct: 404 FSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLG 463
Query: 183 NAGHLKEAVDLLRCTPCGFDTIGWTSLLSHCNAHHDVGVGRHCFDNVVAPDD*KAGAYVL 4 G LKEA+ +++ P + + W +LL C H++V + + DN+V D G Y L Sbjct: 464 RVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSL 523
Query: 3 M 1 + Sbjct: 524 L 524
Score = 46.6 bits (109), Expect = 4e-05 Identities = 28/98 (28%), Positives = 47/98 (47%) Frame = -2
Query: 351 MQEEGWKPDNVTLVSILSACSRENLLSEGCEHFEAMRNTKITPSEDHFNCMVDLLGNAGH 172 M G K D ++SIL+AC+ LLS G ++ + + + N ++D+ G+ Sbjct: 306 MVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGN 365
Query: 171 LKEAVDLLRCTPCGFDTIGWTSLLSHCNAHHDVGVGRH 58 LK+A D+ P D + W ++L H +GV H Sbjct: 366 LKKAFDVFNDIP-KKDLVSWNTML------HGLGVHGH 396
Score = 30.4 bits (67), Expect = 2.9 Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 6/116 (5%) Frame = -2
Query: 360 YQDMQEEGWKPDNVTLVSILSACSRENLLSEGCEHFEAMRN--TKITPSEDHF--NCMVD 193 + +MQ G DN T +L ACS ++ L + M N K+ S D + N ++D Sbjct: 105 FSEMQRFGLFADNFTYPFLLKACSGQSWLPV----VKMMHNHIEKLGLSSDIYVPNALID 160
Query: 192 LLGNAGHL--KEAVDLLRCTPCGFDTIGWTSLLSHCNAHHDVGVGRHCFDNVVAPD 31 G L ++A+ L DT+ W S+L ++ R FD + D Sbjct: 161 CYSRCGGLGVRDAMKLFE-KMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRD 215
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460 OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1 Length = 623
Score = 90.5 bits (223), Expect = 2e-18 Identities = 47/121 (38%), Positives = 65/121 (53%), Gaps = 1/121 (0%) Frame = -2
Query: 360 YQDMQEEGWKPDNVTLVSILSACSRENLLSEGCEHFEAM-RNTKITPSEDHFNCMVDLLG 184 + DM + G +PD V +LSACS L +G E F AM R K+ P +H++C+VDLLG Sbjct: 346 FDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLG 405
Query: 183 NAGHLKEAVDLLRCTPCGFDTIGWTSLLSHCNAHHDVGVGRHCFDNVVAPDD*KAGAYVL 4 AG L EA++ + P D W +LL C H +V + F V+ + G YVL Sbjct: 406 RAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVL 465
Query: 3 M 1 M Sbjct: 466 M 466
Score = 43.9 bits (102), Expect = 3e-04 Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 1/108 (0%) Frame = -2
Query: 360 YQDMQEEGWKPDNVTLVSILSACSRENLLSEGCEHFEAMRNTKITPSEDHFNCMVDLLGN 181 Y+ M+ G PD TLVS+LS+C+ G E + + + P+ N + + Sbjct: 245 YEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYAR 304
Query: 180 AGHLKEAVDLLRCTPCGFDTIGWTSLLSHCNAHHDVG-VGRHCFDNVV 40 G+L +A + P + WT+++ C H +G +G FD+++ Sbjct: 305 CGNLAKARAVFDIMPVK-SLVSWTAMIG-CYGMHGMGEIGLMLFDDMI 350
>sp|Q9SVH0|PP329_ARATH Pentatricopeptide repeat-containing protein At4g20770 OS=Arabidopsis thaliana GN=PCMP-E35 PE=2 SV=2 Length = 774
Score = 90.1 bits (222), Expect = 3e-18 Identities = 47/121 (38%), Positives = 66/121 (54%), Gaps = 1/121 (0%) Frame = -2
Query: 360 YQDMQEEGWKPDNVTLVSILSACSRENLLSEGCEHFEAMRNTK-ITPSEDHFNCMVDLLG 184 Y+ M G KPD +T VS+L+ACS L+ G E +M+ I P DH+ C+VD LG Sbjct: 608 YRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLG 667
Query: 183 NAGHLKEAVDLLRCTPCGFDTIGWTSLLSHCNAHHDVGVGRHCFDNVVAPDD*KAGAYVL 4 AG L++A L TP ++ W LLS C H DV + R + ++ D + AYVL Sbjct: 668 RAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVL 727
Query: 3 M 1 + Sbjct: 728 L 728
Score = 31.6 bits (70), Expect = 1.3 Identities = 20/88 (22%), Positives = 40/88 (45%) Frame = -2
Query: 360 YQDMQEEGWKPDNVTLVSILSACSRENLLSEGCEHFEAMRNTKITPSEDHFNCMVDLLGN 181 ++ MQ + KPD TL ILS+C+R L G + + T+I+ + + ++ + Sbjct: 404 FRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSE 463
Query: 180 AGHLKEAVDLLRCTPCGFDTIGWTSLLS 97 ++ + + D W S++S Sbjct: 464 CEKMEISECIFDDCINELDIACWNSMIS 491
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana GN=PCMP-H41 PE=2 SV=1 Length = 786
Score = 90.1 bits (222), Expect = 3e-18 Identities = 42/118 (35%), Positives = 72/118 (61%), Gaps = 1/118 (0%) Frame = -2
Query: 360 YQDMQEEGWKPDNVTLVSILSACSRENLLSEGCEHFEAMRNT-KITPSEDHFNCMVDLLG 184 ++ M EG +PD++T V + SAC+ L+++G ++F+ M++ KI P+ H+ CMVDL G Sbjct: 503 FETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFG 562
Query: 183 NAGHLKEAVDLLRCTPCGFDTIGWTSLLSHCNAHHDVGVGRHCFDNVVAPDD*KAGAY 10 AG L+EA + + P D + W SLLS C H ++ +G+ + ++ + +GAY Sbjct: 563 RAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAY 620
Score = 40.0 bits (92), Expect = 0.004 Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 4/91 (4%) Frame = -2
Query: 360 YQDMQEEGWKPDNVTLVSILSACSRENLLSEGCE-HFEAMRNTKITPSEDHFNCMVDLLG 184 ++ M G +P++ TL ++LS S LS G + H A+++ +I S N ++ + Sbjct: 401 FRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIY-SVSVSNALITMYA 459
Query: 183 NAGHL---KEAVDLLRCTPCGFDTIGWTSLL 100 AG++ A DL+RC DT+ WTS++ Sbjct: 460 KAGNITSASRAFDLIRCER---DTVSWTSMI 487
>sp|Q9LXY5|PP284_ARATH Pentatricopeptide repeat-containing protein At3g56550 OS=Arabidopsis thaliana GN=PCMP-H80 PE=2 SV=1 Length = 581
Score = 89.4 bits (220), Expect = 5e-18 Identities = 42/121 (34%), Positives = 69/121 (57%), Gaps = 1/121 (0%) Frame = -2
Query: 360 YQDMQEEGWKPDNVTLVSILSACSRENLLSEGCEHFEAMRNT-KITPSEDHFNCMVDLLG 184 ++ M G +P+ +T + +L CS + L+ EG EHFE M + +TP+ H+ CMVDL G Sbjct: 297 FRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYG 356
Query: 183 NAGHLKEAVDLLRCTPCGFDTIGWTSLLSHCNAHHDVGVGRHCFDNVVAPDD*KAGAYVL 4 AG L+ +++++ + C D + W +LL C H ++ +G +V + AG YVL Sbjct: 357 RAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVL 416
Query: 3 M 1 M Sbjct: 417 M 417
Score = 33.5 bits (75), Expect = 0.34 Identities = 22/93 (23%), Positives = 41/93 (44%) Frame = -2
Query: 360 YQDMQEEGWKPDNVTLVSILSACSRENLLSEGCEHFEAMRNTKITPSEDHFNCMVDLLGN 181 Y+ M EG D+ TLV++LS+C+ + L+ G + + N ++D+ Sbjct: 196 YKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAK 255
Query: 180 AGHLKEAVDLLRCTPCGFDTIGWTSLLSHCNAH 82 G L+ A+ + D + W S++ H Sbjct: 256 CGSLENAIGVFNGMR-KRDVLTWNSMIIGYGVH 287
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1 Length = 694
Score = 89.4 bits (220), Expect = 5e-18 Identities = 41/118 (34%), Positives = 65/118 (55%) Frame = -2
Query: 360 YQDMQEEGWKPDNVTLVSILSACSRENLLSEGCEHFEAMRNTKITPSEDHFNCMVDLLGN 181 Y+ M+ G P++VT + +L AC+ ++ EG F M + KI P + H+ C++DLLG Sbjct: 412 YRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGR 471
Query: 180 AGHLKEAVDLLRCTPCGFDTIGWTSLLSHCNAHHDVGVGRHCFDNVVAPDD*KAGAYV 7 AGHL +A ++++C P W +LLS C H V +G + + + D G YV Sbjct: 472 AGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYV 529
Score = 30.0 bits (66), Expect = 3.8 Identities = 19/101 (18%), Positives = 44/101 (43%) Frame = -2
Query: 360 YQDMQEEGWKPDNVTLVSILSACSRENLLSEGCEHFEAMRNTKITPSEDHFNCMVDLLGN 181 + +M + +PD +++ S +SAC++ L + +E + + + ++D+ Sbjct: 311 FHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAK 370
Query: 180 AGHLKEAVDLLRCTPCGFDTIGWTSLLSHCNAHHDVGVGRH 58 G + E L+ D + W++++ VG G H Sbjct: 371 CGSV-EGARLVFDRTLDRDVVVWSAMI--------VGYGLH 402
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2 SV=1 Length = 630
Score = 89.0 bits (219), Expect = 7e-18 Identities = 44/121 (36%), Positives = 67/121 (55%), Gaps = 1/121 (0%) Frame = -2
Query: 360 YQDMQEEGWKPDNVTLVSILSACSRENLLSEGCEHFEAMRNTK-ITPSEDHFNCMVDLLG 184 ++ M+ G KP+ +T+V +L ACS LL +G +F +M+ I P +H+ CM+DLLG Sbjct: 347 FERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLG 406
Query: 183 NAGHLKEAVDLLRCTPCGFDTIGWTSLLSHCNAHHDVGVGRHCFDNVVAPDD*KAGAYVL 4 AG L +AV LL C D + W +LL C ++ + + V+A D AG Y L Sbjct: 407 KAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTL 466
Query: 3 M 1 + Sbjct: 467 L 467
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2 SV=1 Length = 850
Score = 88.2 bits (217), Expect = 1e-17 Identities = 46/119 (38%), Positives = 66/119 (55%), Gaps = 1/119 (0%) Frame = -2
Query: 360 YQDMQEEGWKPDNVTLVSILSACSRENLLSEGCEHFEAM-RNTKITPSEDHFNCMVDLLG 184 + M EEG KP+ VT V+ILSACS L+SEG HF +M + KI P +H+ CMVDLL Sbjct: 563 FNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLC 622
Query: 183 NAGHLKEAVDLLRCTPCGFDTIGWTSLLSHCNAHHDVGVGRHCFDNVVAPDD*KAGAYV 7 AG L +A + + P D + W + L C H + +G+ ++ D + AY+ Sbjct: 623 RAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYI 681
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1 Length = 743
Score = 87.4 bits (215), Expect = 2e-17 Identities = 43/121 (35%), Positives = 69/121 (57%), Gaps = 1/121 (0%) Frame = -2
Query: 360 YQDMQEEGWKPDNVTLVSILSACSRENLLSEGCEHFEAMRNTK-ITPSEDHFNCMVDLLG 184 + M + G KPD VTL ++SACSR L+ +G +F+ M + I PS H++CM+DL Sbjct: 460 FDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFS 519
Query: 183 NAGHLKEAVDLLRCTPCGFDTIGWTSLLSHCNAHHDVGVGRHCFDNVVAPDD*KAGAYVL 4 +G L+EA+ + P D IGWT+LLS C ++ +G+ ++++ D Y L Sbjct: 520 RSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTL 579
Query: 3 M 1 + Sbjct: 580 L 580
Score = 40.0 bits (92), Expect = 0.004 Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 4/92 (4%) Frame = -2
Query: 360 YQDMQEEGWKPDNVTLVSILSACSRENLLSEGCEHFEAMRNTKITPSEDHF----NCMVD 193 + DMQ G PD+ TL +SAC+ + L EG + IT H+ N +V Sbjct: 359 FLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQ----FHGKAITSGLIHYVTVSNSLVT 414
Query: 192 LLGNAGHLKEAVDLLRCTPCGFDTIGWTSLLS 97 L G G + ++ L D + WT+++S Sbjct: 415 LYGKCGDIDDSTRLFNEMNVR-DAVSWTAMVS 445
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PNA8 |
Definition |
tr|A7PNA8|A7PNA8_VITVI Chromosome chr1 scaffold_22, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
121 |
Score (bit) |
105.0 |
E-value |
1.0e-21 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916240|Adiantum capillus-veneris mRNA, clone: YMU001_000085_A01. (361 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PNA8|A7PNA8_VITVI Chromosome chr1 scaffold_22, whole genome... 105 1e-21 tr|Q3LAF9|Q3LAF9_HORVU Pentatricopeptide repeat-containing prote... 103 6e-21 tr|A7PP85|A7PP85_VITVI Chromosome chr8 scaffold_23, whole genome... 100 4e-20 tr|A5BVN8|A5BVN8_VITVI Putative uncharacterized protein OS=Vitis... 100 4e-20 tr|A7QUT6|A7QUT6_VITVI Chromosome chr1 scaffold_180, whole genom... 100 5e-20 tr|A7QGY9|A7QGY9_VITVI Chromosome chr3 scaffold_95, whole genome... 100 5e-20 tr|Q6ETD1|Q6ETD1_ORYSJ Os02g0106300 protein OS=Oryza sativa subs... 100 6e-20 tr|A2WZV4|A2WZV4_ORYSI Putative uncharacterized protein OS=Oryza... 100 6e-20 tr|A2XTM0|A2XTM0_ORYSI Putative uncharacterized protein OS=Oryza... 97 5e-19 tr|Q7XQN7|Q7XQN7_ORYSA OSJNBa0084A10.18 protein OS=Oryza sativa ... 96 7e-19 tr|Q01JF0|Q01JF0_ORYSA H0315E07.3 protein OS=Oryza sativa GN=H03... 96 7e-19 tr|A3AU07|A3AU07_ORYSJ Putative uncharacterized protein OS=Oryza... 96 7e-19 tr|B4F908|B4F908_MAIZE Putative uncharacterized protein OS=Zea m... 96 1e-18 tr|A7QTX0|A7QTX0_VITVI Chromosome undetermined scaffold_171, who... 96 1e-18 tr|A7QEK5|A7QEK5_VITVI Chromosome chr17 scaffold_85, whole genom... 96 1e-18 tr|A7P9K4|A7P9K4_VITVI Chromosome chr3 scaffold_8, whole genome ... 96 1e-18 tr|A7QI90|A7QI90_VITVI Chromosome chr17 scaffold_101, whole geno... 95 2e-18 tr|A9RJW2|A9RJW2_PHYPA Predicted protein OS=Physcomitrella paten... 95 2e-18 tr|A7R627|A7R627_VITVI Chromosome undetermined scaffold_1140, wh... 95 2e-18 tr|A7R3F3|A7R3F3_VITVI Chromosome undetermined scaffold_518, who... 95 2e-18 tr|Q7XV62|Q7XV62_ORYSJ OSJNBa0006B20.5 protein (Putative unchara... 94 3e-18 tr|Q6F382|Q6F382_ORYSJ Os03g0795200 protein OS=Oryza sativa subs... 94 3e-18 tr|B8LLJ0|B8LLJ0_PICSI Putative uncharacterized protein OS=Picea... 94 3e-18 tr|B8AU15|B8AU15_ORYSI Putative uncharacterized protein OS=Oryza... 94 3e-18 tr|A3ANL0|A3ANL0_ORYSJ Putative uncharacterized protein OS=Oryza... 94 3e-18 tr|A2XMV7|A2XMV7_ORYSI Putative uncharacterized protein OS=Oryza... 94 3e-18 tr|Q8LQE8|Q8LQE8_ORYSJ Pentatricopeptide (PPR) repeat-containing... 94 4e-18 tr|A3B7R9|A3B7R9_ORYSJ Putative uncharacterized protein OS=Oryza... 94 4e-18 tr|A2WWE8|A2WWE8_ORYSI Putative uncharacterized protein OS=Oryza... 94 4e-18 tr|B4F8N1|B4F8N1_MAIZE Putative uncharacterized protein OS=Zea m... 93 6e-18
>tr|A7PNA8|A7PNA8_VITVI Chromosome chr1 scaffold_22, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00021165001 PE=4 SV=1 Length = 697
Score = 105 bits (261), Expect = 1e-21 Identities = 49/121 (40%), Positives = 75/121 (61%), Gaps = 1/121 (0%) Frame = -2
Query: 360 YQDMQEEGWKPDNVTLVSILSACSRENLLSEGCEHFEAM-RNTKITPSEDHFNCMVDLLG 184 ++ M G KPD VT + +LSACSR L+ +G ++FE+M + I P DH C++DLLG Sbjct: 414 FERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLG 473
Query: 183 NAGHLKEAVDLLRCTPCGFDTIGWTSLLSHCNAHHDVGVGRHCFDNVVAPDD*KAGAYVL 4 AG L+EA + + PC D +GW +LLS C H D+ +G+ D+++A + +YVL Sbjct: 474 RAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGDMEIGKWAADSLIALEPQNPASYVL 533
Query: 3 M 1 + Sbjct: 534 L 534
>tr|Q3LAF9|Q3LAF9_HORVU Pentatricopeptide repeat-containing protein OS=Hordeum vulgare GN=ppr PE=4 SV=1 Length = 652
Score = 103 bits (256), Expect = 6e-21 Identities = 52/121 (42%), Positives = 74/121 (61%), Gaps = 1/121 (0%) Frame = -2
Query: 360 YQDMQEEGWKPDNVTLVSILSACSRENLLSEGCEHFEAMRNT-KITPSEDHFNCMVDLLG 184 +Q M +G +PDNV++V++LSACS EGC++F AM +T K+ P+ +H+ CMVDLLG Sbjct: 365 FQRMVSQGIRPDNVSMVALLSACSHAGKYEEGCKYFFAMESTYKLRPTLEHYACMVDLLG 424
Query: 183 NAGHLKEAVDLLRCTPCGFDTIGWTSLLSHCNAHHDVGVGRHCFDNVVAPDD*KAGAYVL 4 AG L+EA +L+ P D W +LL C H +V G F +V+ + G YVL Sbjct: 425 RAGRLEEARELISSMPMPADGSVWGALLGACKIHKNVEAGEEAFKHVIMLEPSNVGYYVL 484
Query: 3 M 1 M Sbjct: 485 M 485
Score = 35.0 bits (79), Expect = 1.9 Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 2/110 (1%) Frame = -2
Query: 360 YQDMQEEGWKPDNVTLVSILSACSRENLLSEG--CEHFEAMRNTKITPSEDHFNCMVDLL 187 Y+ M+ G +PD +TLV +LS+CS S G + + R + + +++ Sbjct: 262 YRRMRGHGVEPDALTLVGVLSSCSHLAARSVGLDVDRYVRQRLPGFRANVQLCSALINFH 321
Query: 186 GNAGHLKEAVDLLRCTPCGFDTIGWTSLLSHCNAHHDVGVGRHCFDNVVA 37 G L +A L P + WT+L++ H + + F +V+ Sbjct: 322 ARCGSLPQAQQLFDEMP-RKSIVSWTALITGYGMHGHGDIAINFFQRMVS 370
>tr|A7PP85|A7PP85_VITVI Chromosome chr8 scaffold_23, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00021552001 PE=4 SV=1 Length = 561
Score = 100 bits (249), Expect = 4e-20 Identities = 53/121 (43%), Positives = 69/121 (57%), Gaps = 1/121 (0%) Frame = -2
Query: 360 YQDMQEEGWKPDNVTLVSILSACSRENLLSEGCEHFEAMRNT-KITPSEDHFNCMVDLLG 184 + M EG PD+V IL+ACSR L+ EGC +FE+M+ I PS DH+ CMVDLLG Sbjct: 407 FSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYACMVDLLG 466
Query: 183 NAGHLKEAVDLLRCTPCGFDTIGWTSLLSHCNAHHDVGVGRHCFDNVVAPDD*KAGAYVL 4 AG LKEA +LL+ P W +LL C H D+ +G D + + AG YVL Sbjct: 467 RAGRLKEAYELLKSMPVEPHAGAWGALLGACKLHCDIELGEVVADQLFELEPQNAGNYVL 526
Query: 3 M 1 + Sbjct: 527 L 527
>tr|A5BVN8|A5BVN8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017037 PE=4 SV=1 Length = 546
Score = 100 bits (249), Expect = 4e-20 Identities = 53/121 (43%), Positives = 69/121 (57%), Gaps = 1/121 (0%) Frame = -2
Query: 360 YQDMQEEGWKPDNVTLVSILSACSRENLLSEGCEHFEAMRNT-KITPSEDHFNCMVDLLG 184 + M EG PD+V IL+ACSR L+ EGC +FE+M+ I PS DH+ CMVDLLG Sbjct: 392 FSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYACMVDLLG 451
Query: 183 NAGHLKEAVDLLRCTPCGFDTIGWTSLLSHCNAHHDVGVGRHCFDNVVAPDD*KAGAYVL 4 AG LKEA +LL+ P W +LL C H D+ +G D + + AG YVL Sbjct: 452 RAGRLKEAYELLKSMPVEPHAGAWGALLGACKLHCDIELGEVVADQLFELEPQNAGNYVL 511
Query: 3 M 1 + Sbjct: 512 L 512
>tr|A7QUT6|A7QUT6_VITVI Chromosome chr1 scaffold_180, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006973001 PE=4 SV=1 Length = 684
Score = 100 bits (248), Expect = 5e-20 Identities = 46/113 (40%), Positives = 69/113 (61%) Frame = -2
Query: 339 GWKPDNVTLVSILSACSRENLLSEGCEHFEAMRNTKITPSEDHFNCMVDLLGNAGHLKEA 160 G KPD+VT++ +L ACS L+ EG +F +M + P +DH+ CMVDLLG AG L EA Sbjct: 483 GEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEA 542
Query: 159 VDLLRCTPCGFDTIGWTSLLSHCNAHHDVGVGRHCFDNVVAPDD*KAGAYVLM 1 +L+ P D + W SLL+ C H ++ +G+H + ++ D +G YVL+ Sbjct: 543 KNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLL 595
Score = 38.5 bits (88), Expect = 0.17 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Frame = -2
Query: 351 MQEEGWKPDNVTLVSILSACSRENLLSEGCE-HFEAMRNTKITPSEDHFNCMVDLLGNAG 175 M + G +PD VTL S++SAC+ L EG + H ++ K N +VD+ Sbjct: 239 MMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCS 298
Query: 174 HLKEA 160 + EA Sbjct: 299 KVNEA 303
>tr|A7QGY9|A7QGY9_VITVI Chromosome chr3 scaffold_95, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00038549001 PE=4 SV=1 Length = 900
Score = 100 bits (248), Expect = 5e-20 Identities = 50/120 (41%), Positives = 70/120 (58%) Frame = -2
Query: 360 YQDMQEEGWKPDNVTLVSILSACSRENLLSEGCEHFEAMRNTKITPSEDHFNCMVDLLGN 181 +++MQ+EG KPD+VT +S+LSACS L+ EG F M+ I PS H+ CMVDLLG Sbjct: 629 FREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQEYGIKPSLKHYGCMVDLLGR 688
Query: 180 AGHLKEAVDLLRCTPCGFDTIGWTSLLSHCNAHHDVGVGRHCFDNVVAPDD*KAGAYVLM 1 AG L+ A D ++ P D W +LL C H ++ +G+ D + D G YVL+ Sbjct: 689 AGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLL 748
>tr|Q6ETD1|Q6ETD1_ORYSJ Os02g0106300 protein OS=Oryza sativa subsp. japonica GN=OJ1359_D06.22 PE=2 SV=1 Length = 751
Score = 99.8 bits (247), Expect = 6e-20 Identities = 44/121 (36%), Positives = 72/121 (59%), Gaps = 1/121 (0%) Frame = -2
Query: 360 YQDMQEEGWKPDNVTLVSILSACSRENLLSEGCEHFEAMRNTK-ITPSEDHFNCMVDLLG 184 ++ M G KPD VT + +LSACSR L+ +GC++F++M+ I P +DH+ CM+DL Sbjct: 468 FEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYS 527
Query: 183 NAGHLKEAVDLLRCTPCGFDTIGWTSLLSHCNAHHDVGVGRHCFDNVVAPDD*KAGAYVL 4 +G KEA + ++ P D GW +LLS C ++ +G+ +N++ D +YVL Sbjct: 528 RSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVL 587
Query: 3 M 1 + Sbjct: 588 L 588
Score = 40.0 bits (92), Expect = 0.059 Identities = 25/88 (28%), Positives = 44/88 (50%) Frame = -2
Query: 360 YQDMQEEGWKPDNVTLVSILSACSRENLLSEGCEHFEAMRNTKITPSEDHFNCMVDLLGN 181 + +MQ +G KPD+ TL S++S+C+ L EG + + + N +V L G Sbjct: 367 FSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGK 426
Query: 180 AGHLKEAVDLLRCTPCGFDTIGWTSLLS 97 G +++A L D + WT+L++ Sbjct: 427 CGSIEDAHRLFD-EMSFHDQVSWTALVT 453
>tr|A2WZV4|A2WZV4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_05496 PE=4 SV=1 Length = 751
Score = 99.8 bits (247), Expect = 6e-20 Identities = 44/121 (36%), Positives = 73/121 (60%), Gaps = 1/121 (0%) Frame = -2
Query: 360 YQDMQEEGWKPDNVTLVSILSACSRENLLSEGCEHFEAM-RNTKITPSEDHFNCMVDLLG 184 ++ M G KPD VT + +LSACSR L+ +GC++F++M ++ I P +DH+ CM+DL Sbjct: 468 FEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYS 527
Query: 183 NAGHLKEAVDLLRCTPCGFDTIGWTSLLSHCNAHHDVGVGRHCFDNVVAPDD*KAGAYVL 4 +G KEA + ++ P D GW +LLS C ++ +G+ +N++ D +YVL Sbjct: 528 RSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVL 587
Query: 3 M 1 + Sbjct: 588 L 588
Score = 40.0 bits (92), Expect = 0.059 Identities = 25/88 (28%), Positives = 44/88 (50%) Frame = -2
Query: 360 YQDMQEEGWKPDNVTLVSILSACSRENLLSEGCEHFEAMRNTKITPSEDHFNCMVDLLGN 181 + +MQ +G KPD+ TL S++S+C+ L EG + + + N +V L G Sbjct: 367 FSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGK 426
Query: 180 AGHLKEAVDLLRCTPCGFDTIGWTSLLS 97 G +++A L D + WT+L++ Sbjct: 427 CGSIEDAHRLFD-EMSFHDQVSWTALVT 453
>tr|A2XTM0|A2XTM0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_15952 PE=4 SV=1 Length = 655
Score = 96.7 bits (239), Expect = 5e-19 Identities = 46/118 (38%), Positives = 68/118 (57%), Gaps = 1/118 (0%) Frame = -2
Query: 351 MQEEGWKPDNVTLVSILSACSRENLLSEGCEHFEAMRNT-KITPSEDHFNCMVDLLGNAG 175 M + G++PD+ T +SILSAC+ + L EGC HF +M+ + P DH++CMVDLLG +G Sbjct: 467 MTKAGFRPDHATFLSILSACAHKGYLYEGCYHFRSMQEDWNLVPRSDHYSCMVDLLGRSG 526
Query: 174 HLKEAVDLLRCTPCGFDTIGWTSLLSHCNAHHDVGVGRHCFDNVVAPDD*KAGAYVLM 1 + +A D R P T W +L S CN+H ++ +G NV+ G Y L+ Sbjct: 527 FIHQAYDFTRRIPSDHRTTAWETLFSACNSHGEIQLGEIIARNVLKARPSDGGMYTLL 584
>tr|Q7XQN7|Q7XQN7_ORYSA OSJNBa0084A10.18 protein OS=Oryza sativa GN=OSJNBa0084A10.18 PE=4 SV=3 Length = 729
Score = 96.3 bits (238), Expect = 7e-19 Identities = 46/118 (38%), Positives = 68/118 (57%), Gaps = 1/118 (0%) Frame = -2
Query: 351 MQEEGWKPDNVTLVSILSACSRENLLSEGCEHFEAMRNT-KITPSEDHFNCMVDLLGNAG 175 M + G++PD+ T +SILSAC+ + L EGC HF +M+ + P DH++CMVDLLG +G Sbjct: 467 MTKAGFRPDHATFLSILSACAHKGYLYEGCYHFRSMQEDWNLVPRSDHYSCMVDLLGRSG 526
Query: 174 HLKEAVDLLRCTPCGFDTIGWTSLLSHCNAHHDVGVGRHCFDNVVAPDD*KAGAYVLM 1 + +A D R P T W +L S CN+H ++ +G NV+ G Y L+ Sbjct: 527 FIHQAYDFTRRIPSDHRTTAWETLFSVCNSHGEIQLGEIIARNVLKARPSDGGMYTLL 584
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