BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916241|Adiantum capillus-veneris mRNA, clone:
YMU001_000085_A02.
         (427 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P16664|RGP1_YEAST Reduced growth phenotype protein 1 OS=Sacch...    30   4.0  
sp|Q18KC5|AUBA_HALWD RNA-binding protein AU-1 OS=Haloquadratum w...    29   6.8  

>sp|P16664|RGP1_YEAST Reduced growth phenotype protein 1
           OS=Saccharomyces cerevisiae GN=RGP1 PE=1 SV=2
          Length = 663

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 19/68 (27%), Positives = 38/68 (55%)
 Frame = -3

Query: 395 EKSAVDVESPVQTDELTIRPHHYKVEVVESPDWLPKRLDNRVDTRSTGVSTGCKDKVLCE 216
           + S +D++SP++ +E   R     +E+VES   + + +D  +D +  GV  G KD+   +
Sbjct: 362 KSSIIDIDSPLEDNEFVKRVKKNFIELVESNQNVSRDIDELIDLQ-MGVQFG-KDEDSSD 419

Query: 215 EDHSISNF 192
            + + S+F
Sbjct: 420 PEPNDSHF 427


>sp|Q18KC5|AUBA_HALWD RNA-binding protein AU-1 OS=Haloquadratum
           walsbyi (strain DSM 16790) GN=aubA PE=3 SV=1
          Length = 505

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 19/65 (29%), Positives = 36/65 (55%)
 Frame = -3

Query: 383 VDVESPVQTDELTIRPHHYKVEVVESPDWLPKRLDNRVDTRSTGVSTGCKDKVLCEEDHS 204
           V++ +P++    +IR     V+VV+ PD   +R+D+  D  +T V+ G     L E+  S
Sbjct: 437 VNICTPIECFPKSIRYVDLHVDVVKYPDGTVERVDD--DELNTAVTAGHIPPALAEKAQS 494

Query: 203 ISNFL 189
           +++ L
Sbjct: 495 VASSL 499

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916241|Adiantum capillus-veneris mRNA, clone:
YMU001_000085_A02.
         (427 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B4AEQ1|B4AEQ1_BACPU Putative acetyltransferase OS=Bacillus pu...    37   0.37 
tr|A8FCI5|A8FCI5_BACP2 Possible acetyltransferase OS=Bacillus pu...    37   0.63 
tr|A8EU91|A8EU91_ARCB4 DNA polymerase III, epsilon subunit OS=Ar...    34   4.1  
tr|A3M0J6|A3M0J6_PICST Predicted protein (Fragment) OS=Pichia st...    33   9.1  

>tr|B4AEQ1|B4AEQ1_BACPU Putative acetyltransferase OS=Bacillus
           pumilus ATCC 7061 GN=BAT_2784 PE=4 SV=1
          Length = 174

 Score = 37.4 bits (85), Expect = 0.37
 Identities = 19/56 (33%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
 Frame = -3

Query: 425 IVKFGSLELDEKSAVDVESPV--QTDELTIRPHHYKVEVVESPDWLPKRLDNRVDT 264
           IV+FG++E D ++ +D++S V  ++D L   P   K  ++E   W+ KR++N  +T
Sbjct: 8   IVRFGNME-DAETTLDIQSSVIAESDYLLTTPEENKKTLLEHKAWIQKRIENENET 62


>tr|A8FCI5|A8FCI5_BACP2 Possible acetyltransferase OS=Bacillus
           pumilus (strain SAFR-032) GN=BPUM_1269 PE=4 SV=1
          Length = 174

 Score = 36.6 bits (83), Expect = 0.63
 Identities = 19/56 (33%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
 Frame = -3

Query: 425 IVKFGSLELDEKSAVDVESPV--QTDELTIRPHHYKVEVVESPDWLPKRLDNRVDT 264
           IV+FG++E D ++ +D++S V  ++D L   P   K  ++E   W+ KR++N  +T
Sbjct: 8   IVRFGNME-DAETTLDIQSSVIAESDYLLTTPEENKKTLLEHKAWIQKRIENDNET 62


>tr|A8EU91|A8EU91_ARCB4 DNA polymerase III, epsilon subunit
           OS=Arcobacter butzleri (strain RM4018) GN=dnaQ4 PE=4
           SV=1
          Length = 247

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 25/85 (29%), Positives = 43/85 (50%)
 Frame = -3

Query: 425 IVKFGSLELDEKSAVDVESPVQTDELTIRPHHYKVEVVESPDWLPKRLDNRVDTRSTGVS 246
           +++FG++ +D K  V+       DEL   P   K+E +E  +  P  L+N+       V 
Sbjct: 20  VIQFGAMIVDNKGKVEA-----FDELCSAPIPIKLEAMEVHNITPDLLENK----PKAVE 70

Query: 245 TGCKDKVLCEEDHSISNFLLASNVN 171
           T    ++  EE +S  N+L+A N+N
Sbjct: 71  TNFYKRL--EELNSDENYLIAHNIN 93


>tr|A3M0J6|A3M0J6_PICST Predicted protein (Fragment) OS=Pichia
           stipitis GN=PICST_73960 PE=4 SV=2
          Length = 1335

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 16/44 (36%), Positives = 27/44 (61%)
 Frame = -3

Query: 398 DEKSAVDVESPVQTDELTIRPHHYKVEVVESPDWLPKRLDNRVD 267
           +E +  D   P++T   TIR +H     V++PDW+P+ LD++ D
Sbjct: 242 EETNMEDNSEPIKTS--TIRENH-----VDTPDWMPEELDDKWD 278