BP916246 [AcEST]

BP916246
Clone id	YMU001_000085_A10
Library	YMU01
Length	428
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000085_A10.
Accession	BP916246
Tissue type	prothallium
Developmental stage	-
Contig ID	-
Sequence	GGAAGAATTCGCGGCCGCGAATCATAGCGTTTGGGTGAATTTGGTAGGGTGAGGTAGCTT ACTATGGCAATTATGGATAGCCGAAAAACGGCTATCAGCAGCATAAGTCAAATCCAGAAA AACCATAAGCCACACTAGCTTCCACCATAAAATTGCAACCATTATCCCTGAGGGAATCTC AGCCCTTACCGATCAATCATAATCACACTAAACCAACTCCCACACTTGGAGTTTGACACA TCCCCTGCAATCAATCGGAGTCCATACATATGTGACCCTTAAGACGTTATTCTTTCATGC ATAACAAGAGTTGGACTATAAACTAATCATGATATAAAAATCTAATTTTGACCACATCCA ACCATGCAAAGTTGATGCATCACATCTGCAGTTCACCTCCCTAGCACATAGAGCTAGTTT TGACCTAG
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q8CDJ8
Definition	sp\|Q8CDJ8\|STON1_MOUSE Stonin-1 OS=Mus musculus
Align length	15
Score (bit)	30.4
E-value	2.8
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP916246\|Adiantum capillus-veneris mRNA, clone: YMU001_000085_A10. (406 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q8CDJ8\|STON1_MOUSE Stonin-1 OS=Mus musculus GN=Ston1 PE=1 SV=2 30 2.8 sp\|Q62170\|SELPL_MOUSE P-selectin glycoprotein ligand 1 OS=Mus mu... 29 8.2 >sp\|Q8CDJ8\|STON1_MOUSE Stonin-1 OS=Mus musculus GN=Ston1 PE=1 SV=2 Length = 730 Score = 30.4 bits (67), Expect = 2.8 Identities = 11/15 (73%), Positives = 14/15 (93%) Frame = +2 Query: 164 LPINHNHTKPTPTLG 208 LP +H+HT+PTPTLG Sbjct: 137 LPSSHSHTQPTPTLG 151 >sp\|Q62170\|SELPL_MOUSE P-selectin glycoprotein ligand 1 OS=Mus musculus GN=Selplg PE=1 SV=1 Length = 397 Score = 28.9 bits (63), Expect = 8.2 Identities = 15/40 (37%), Positives = 19/40 (47%) Frame = +2 Query: 83 KSNPEKP*ATLASTIKLQPLSLRESQPLPINHNHTKPTPT 202 +++ KP T A T K P SQP P +KP PT Sbjct: 171 EADTSKPAPTEAETSKPAPTEAETSQPAPNEAETSKPAPT 210
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP916246\|Adiantum capillus-veneris mRNA, clone: YMU001_000085_A10. (406 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done *** No hits found ****