BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916248|Adiantum capillus-veneris mRNA, clone:
YMU001_000085_B01.
         (425 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9LM73|FB14_ARATH Putative F-box protein At1g20800 OS=Arabido...    34   0.21 
sp|Q02IK5|Y5090_PSEAB UPF0225 protein PA14_50900 OS=Pseudomonas ...    31   2.3  
sp|Q9I4T5|Y1039_PSEAE UPF0225 protein PA1039 OS=Pseudomonas aeru...    31   2.3  
sp|P39961|YE14_YEAST Uncharacterized transcriptional regulatory ...    29   8.8  

>sp|Q9LM73|FB14_ARATH Putative F-box protein At1g20800
           OS=Arabidopsis thaliana GN=At1g20800 PE=4 SV=1
          Length = 479

 Score = 34.3 bits (77), Expect = 0.21
 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
 Frame = -3

Query: 327 DILMFDLRTNEWK---WLKKLSTVYCFSLIFEPSLSAMA*EIVQGQQMKVMQAI*GDFC 160
           D+  +DLR N+W+   W+ +    Y    +F+PS S+ A E+ Q   ++ M  + GD C
Sbjct: 299 DVFGYDLRANKWEVIGWIPEWCDGYQVFYLFKPSFSS-AIELKQKVDVETMNMVHGDDC 356


>sp|Q02IK5|Y5090_PSEAB UPF0225 protein PA14_50900 OS=Pseudomonas
           aeruginosa (strain UCBPP-PA14) GN=PA14_50900 PE=3 SV=1
          Length = 157

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 18/50 (36%), Positives = 22/50 (44%)
 Frame = -3

Query: 168 DFC*RRHLRHG*STVKAMMEEHGMHYALGTDDFSEDVVLFSQYYAWRTDG 19
           D C R H  H   T +A+M      YALG  D+  D  L +Q      DG
Sbjct: 16  DCCGRYHQGHPAPTAEALMRSRYSAYALGLVDYLRDTTLPAQQAGLDLDG 65


>sp|Q9I4T5|Y1039_PSEAE UPF0225 protein PA1039 OS=Pseudomonas
           aeruginosa GN=PA1039 PE=3 SV=1
          Length = 157

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 18/50 (36%), Positives = 22/50 (44%)
 Frame = -3

Query: 168 DFC*RRHLRHG*STVKAMMEEHGMHYALGTDDFSEDVVLFSQYYAWRTDG 19
           D C R H  H   T +A+M      YALG  D+  D  L +Q      DG
Sbjct: 16  DCCGRYHQGHPAPTAEALMRSRYSAYALGLVDYLRDTTLPAQQAGLDLDG 65


>sp|P39961|YE14_YEAST Uncharacterized transcriptional regulatory
           protein YER184C OS=Saccharomyces cerevisiae GN=YER184C
           PE=2 SV=1
          Length = 794

 Score = 28.9 bits (63), Expect = 8.8
 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +2

Query: 266 TVDNFFNHFHSFVRRS-NMRISISNPFMYMTPFFPQHWTKSKSIHCSNSRKTRE 424
           +++ F N F S   ++ +M   + +P +Y        W   K I CSN R+TRE
Sbjct: 137 SLNRFSNAFESNTAQNVSMYFGVYSPLLYFASTGIS-WITKKLISCSNDRETRE 189

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916248|Adiantum capillus-veneris mRNA, clone:
YMU001_000085_B01.
         (425 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B1HUH2|B1HUH2_LYSSC Transposase, IS4 OS=Lysinibacillus sphaer...    33   7.0  

>tr|B1HUH2|B1HUH2_LYSSC Transposase, IS4 OS=Lysinibacillus
           sphaericus (strain C3-41) GN=Bsph_3839 PE=4 SV=1
          Length = 64

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 13/36 (36%), Positives = 24/36 (66%)
 Frame = -3

Query: 411 REFEQCIDFDFVQCWGKNGVMYMKGLLMDILMFDLR 304
           R+ E  IDF F+  + +N  +++ G+L+ IL+F L+
Sbjct: 29  RKLEAAIDFSFIYSFSRNSSIHLMGVLVLILLFSLK 64