BP916250
Clone id YMU001_000085_B05
Library
Length 261
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000085_B05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ATGCGGGACACAAGGTGTTTATACAGGAATCAGTGAAGTGATGGGATTGAGTCTTCCCCT
ATTGATGCAATATTTTGTTCGGCTATCTTGCAGGATATAGTGGGTTCCAGCCATTTGAAA
GTATTTGTCCCGTCATTGTGCGTATATGGAGAAGAGAGAACGGCAAACAAATGAATGGGA
TGTCGAATATGCCCAAACCATGACATACAAAGTGTGCACTTTTGAAGCAGAATGCCATTG
CTCATATCAAGGATATGGTGG
■■Homology search results ■■ -
sp_hit_id P83401
Definition sp|P83401|AL7A1_DICDI Putative aldehyde dehydrogenase family 7 member A1 homolog OS=Dictyostelium discoideum
Align length 37
Score (bit) 30.0
E-value 3.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916250|Adiantum capillus-veneris mRNA, clone:
YMU001_000085_B05.
(261 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P83401|AL7A1_DICDI Putative aldehyde dehydrogenase family 7 m... 30 3.7
sp|Q8WZ59|TM190_HUMAN Transmembrane protein 190 OS=Homo sapiens ... 30 4.8
sp|P03477|NRAM_I68A3 Neuraminidase OS=Influenza A virus (strain ... 29 6.3
sp|Q5XIG5|GKAP1_RAT G kinase-anchoring protein 1 OS=Rattus norve... 29 8.2

>sp|P83401|AL7A1_DICDI Putative aldehyde dehydrogenase family 7
member A1 homolog OS=Dictyostelium discoideum
GN=DDB_G0276821 PE=3 SV=2
Length = 509

Score = 30.0 bits (66), Expect = 3.7
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2

Query: 158 LSSPYTHNDGTNTFKWLEPTIS-CKIAEQNIASIGED 51
LSS N+ N FKWL PT S C I N+A+ G +
Sbjct: 425 LSSSLFTNNQKNIFKWLGPTGSDCGIVNVNVATNGAE 461


>sp|Q8WZ59|TM190_HUMAN Transmembrane protein 190 OS=Homo sapiens
GN=TMEM190 PE=2 SV=1
Length = 177

Score = 29.6 bits (65), Expect = 4.8
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = -2

Query: 239 NGILLQKCTLCMSWFGHIRHPIHLFAVLSSP 147
+G+LL C++C+ W+ R +H+ L+ P
Sbjct: 89 SGLLLLSCSICLFWWAKRRDVLHMPGFLAGP 119


>sp|P03477|NRAM_I68A3 Neuraminidase OS=Influenza A virus (strain
A/Turkey/Ontario/6118/1968 H8N4) GN=NA PE=3 SV=2
Length = 470

Score = 29.3 bits (64), Expect = 6.3
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = -2

Query: 236 GILLQKCTLCMSWFGHIRHPIHLFAVLSSPYTHNDGTNTFKWLEPT-ISCKIAEQNIASI 60
G+LLQ +LC WF H + ++ P+ NT + T ++ + N +I
Sbjct: 21 GLLLQITSLCSIWFSH-------YNQVTQPHEQACSNNTTNYYNETFVNVTNVQNNYTTI 73

Query: 59 GEDSIPSL 36
E S P++
Sbjct: 74 IEPSAPNV 81


>sp|Q5XIG5|GKAP1_RAT G kinase-anchoring protein 1 OS=Rattus
norvegicus GN=Gkap1 PE=2 SV=1
Length = 366

Score = 28.9 bits (63), Expect = 8.2
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +3

Query: 117 ESICPVIVRIWRRENGKQMNGMSNMPKP*HTKCALLKQNAIAHIK 251
+ + ++VR RRE + NG N P P H + LK I +K
Sbjct: 215 DDVHKILVREKRREQLTEHNGTDNCPAPEHNQEVGLKDGRIERLK 259


tr_hit_id B6LXU2
Definition tr|B6LXU2|B6LXU2_BRAFL Putative uncharacterized protein (Fragment) OS=Branchiostoma floridae
Align length 60
Score (bit) 35.4
E-value 1.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916250|Adiantum capillus-veneris mRNA, clone:
YMU001_000085_B05.
(261 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6LXU2|B6LXU2_BRAFL Putative uncharacterized protein (Fragmen... 35 1.4
tr|Q8KFB1|Q8KFB1_CHLTE Putative uncharacterized protein OS=Chlor... 33 7.1

>tr|B6LXU2|B6LXU2_BRAFL Putative uncharacterized protein (Fragment)
OS=Branchiostoma floridae GN=BRAFLDRAFT_214927 PE=4 SV=1
Length = 281

Score = 35.4 bits (80), Expect = 1.4
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Frame = -2

Query: 170 LFAVLSSPYTHNDGTNTFKWLEPTISCKIAEQNIASIGE----DSIPSLH*FLYKHLVSR 3
+FA+ Y +ND N KWL +I AE+ IA E D++ L LYK SR
Sbjct: 54 IFAIAKGAYRNNDYRNAVKWLNESIQLMEAEEEIAENNEASEGDALQYLGYSLYKMFRSR 113


>tr|Q8KFB1|Q8KFB1_CHLTE Putative uncharacterized protein
OS=Chlorobium tepidum GN=CT0416 PE=4 SV=1
Length = 337

Score = 33.1 bits (74), Expect = 7.1
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +1

Query: 19 LYRNQ*SDGIESSPIDAIFCSAILQDIVGSSHLKVFVPSLCVYGEER 159
L R DG E P A C+AI ++IVG HL+ FV ++ +R
Sbjct: 27 LLRRTGMDGFELYPAGAYDCTAIPKEIVGGVHLRFFVMLRQIWQNDR 73