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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916254
Clone id YMU001_000085_C01
Library
Length 445
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000085_C01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GGTGTATCCTCTTGTACTTCCTCCCCTGGAAGAGGATAGCCTTCGTAAATTCTCTTTGAT
GTTGTATCTTTGGGATCCAATCTCATTACCCGTTTGCCCTTCTTTTGCGACCCTTTGTCT
TGAGTGGTGGACTTCGTCTTTGTAGTTTTATACCTATCTTCTTGGCTCCTCTTCAATTTC
TCAATTGCCAAGGAACCCTTCCTTGACAAGCTTACTGCTGCCGTTTCCTTCGATCTTGAA
GTCCTGATATCTGTTTGATTCTGTGTATTACCAGAACGACTGCCATCTCTTGAATCTGTG
TGCAACTCCAACTTCGCTTGACTTCTCACAATTGTCCTCGTTGGAACACCTCCCTTTTGG
AACCTGGCAGAACGCTTTTTGTTACTCCTACCTTCAGTAGAACTTGTCACACTCTGCCTC
GAAGATGCAGAAACAGATACTGATC
■■Homology search results ■■ -
sp_hit_id P79293
Definition sp|P79293|MYH7_PIG Myosin-7 OS=Sus scrofa
Align length 61
Score (bit) 31.6
E-value 1.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916254|Adiantum capillus-veneris mRNA, clone:
YMU001_000085_C01.
         (445 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P79293|MYH7_PIG Myosin-7 OS=Sus scrofa GN=MYH7 PE=2 SV=2            32   1.5  
sp|Q8MJU9|MYH7_HORSE Myosin-7 OS=Equus caballus GN=MYH7 PE=2 SV=1      32   1.5  
sp|Q9BE39|MYH7_BOVIN Myosin-7 OS=Bos taurus GN=MYH7 PE=2 SV=1          32   1.5  
sp|Q9UKX3|MYH13_HUMAN Myosin-13 OS=Homo sapiens GN=MYH13 PE=1 SV=1     30   3.4  
sp|Q70YC5|ZN365_HUMAN Protein ZNF365 OS=Homo sapiens GN=ZNF365 P...    30   4.5  
sp|Q8VIF2|TSSP2_MOUSE Testis serine protease 2 OS=Mus musculus G...    30   4.5  
sp|Q9QX47|SON_MOUSE SON protein OS=Mus musculus GN=Son PE=1 SV=1       30   4.5  
sp|P02562|MYSS_RABIT Myosin heavy chain, skeletal muscle (Fragme...    30   5.9  
sp|P13542|MYH8_MOUSE Myosin-8 OS=Mus musculus GN=Myh8 PE=2 SV=2        29   7.7  
sp|P04460|MYH6_RABIT Myosin-6 (Fragment) OS=Oryctolagus cuniculu...    29   7.7  
sp|Q29RW1|MYH4_RAT Myosin-4 OS=Rattus norvegicus GN=Myh4 PE=2 SV=1     29   7.7  
sp|Q28641|MYH4_RABIT Myosin-4 OS=Oryctolagus cuniculus GN=MYH4 P...    29   7.7  
sp|Q9TV62|MYH4_PIG Myosin-4 OS=Sus scrofa GN=MYH4 PE=2 SV=1            29   7.7  
sp|Q5SX39|MYH4_MOUSE Myosin-4 OS=Mus musculus GN=Myh4 PE=2 SV=1        29   7.7  
sp|Q9TV61|MYH1_PIG Myosin-1 OS=Sus scrofa GN=MYH1 PE=2 SV=1            29   7.7  
sp|Q8MJV0|MYH1_HORSE Myosin-1 OS=Equus caballus GN=MYH1 PE=2 SV=1      29   7.7  
sp|Q9BE40|MYH1_BOVIN Myosin-1 OS=Bos taurus GN=MYH1 PE=2 SV=2          29   7.7  
sp|P28172|IFNT_OVIMO Interferon tau OS=Ovibos moschatus GN=IFNT ...    29   7.7  
sp|Q3V050|S47A2_MOUSE Multidrug and toxin extrusion protein 2 OS...    29   7.8  
sp|Q7UA35|TIG_SYNPX Trigger factor OS=Synechococcus sp. (strain ...    29   10.0 
sp|Q01VB2|RPOC_SOLUE DNA-directed RNA polymerase subunit beta' O...    29   10.0 
sp|P02564|MYH7_RAT Myosin-7 OS=Rattus norvegicus GN=Myh7 PE=2 SV=2     29   10.0 
sp|Q076A5|MYH4_CANFA Myosin-4 OS=Canis familiaris GN=MYH4 PE=3 SV=1    29   10.0 
sp|P12882|MYH1_HUMAN Myosin-1 OS=Homo sapiens GN=MYH1 PE=1 SV=2        29   10.0 
sp|Q076A6|MYH1_CANFA Myosin-1 OS=Canis familiaris GN=MYH1 PE=3 SV=2    29   10.0 
sp|Q076A3|MYH13_CANFA Myosin-13 OS=Canis familiaris GN=MYH13 PE=...    29   10.0 
sp|Q55GU9|MSH6_DICDI DNA mismatch repair protein Msh6 OS=Dictyos...    29   10.0 
sp|P56698|CAC1B_DISOM Probable voltage-dependent N-type calcium ...    29   10.0 

>sp|P79293|MYH7_PIG Myosin-7 OS=Sus scrofa GN=MYH7 PE=2 SV=2
          Length = 1935

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 14/61 (22%), Positives = 33/61 (54%)
 Frame = -3

Query: 335  TIVRSQAKLELHTDSRDGSRSGNTQNQTDIRTSRSKETAAVSLSRKGSLAIEKLKRSQED 156
            T+ +++ KLE H D  +GS     + + D+  ++ K    + L+++  + +E  K+  ++
Sbjct: 1019 TLTKAKVKLEQHVDDLEGSLEQEKKVRMDLERAKRKLEGDLKLTQESIMDLENDKQQLDE 1078

Query: 155  R 153
            R
Sbjct: 1079 R 1079


>sp|Q8MJU9|MYH7_HORSE Myosin-7 OS=Equus caballus GN=MYH7 PE=2 SV=1
          Length = 1935

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 14/61 (22%), Positives = 33/61 (54%)
 Frame = -3

Query: 335  TIVRSQAKLELHTDSRDGSRSGNTQNQTDIRTSRSKETAAVSLSRKGSLAIEKLKRSQED 156
            T+ +++ KLE H D  +GS     + + D+  ++ K    + L+++  + +E  K+  ++
Sbjct: 1019 TLTKAKVKLEQHVDDLEGSLEQEKKVRMDLERAKRKLEGDLKLTQESIMDLENDKQQLDE 1078

Query: 155  R 153
            R
Sbjct: 1079 R 1079


>sp|Q9BE39|MYH7_BOVIN Myosin-7 OS=Bos taurus GN=MYH7 PE=2 SV=1
          Length = 1935

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 14/61 (22%), Positives = 33/61 (54%)
 Frame = -3

Query: 335  TIVRSQAKLELHTDSRDGSRSGNTQNQTDIRTSRSKETAAVSLSRKGSLAIEKLKRSQED 156
            T+ +++ KLE H D  +GS     + + D+  ++ K    + L+++  + +E  K+  ++
Sbjct: 1019 TLTKAKVKLEQHVDDLEGSLEQEKKVRMDLERAKRKLEGDLKLTQESIMDLENDKQQLDE 1078

Query: 155  R 153
            R
Sbjct: 1079 R 1079


>sp|Q9UKX3|MYH13_HUMAN Myosin-13 OS=Homo sapiens GN=MYH13 PE=1 SV=1
          Length = 1938

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 14/60 (23%), Positives = 32/60 (53%)
 Frame = -3

Query: 332  IVRSQAKLELHTDSRDGSRSGNTQNQTDIRTSRSKETAAVSLSRKGSLAIEKLKRSQEDR 153
            +++  AKLE  TD  +GS     + + D+  ++ K    + +S++  + +E  K+  E++
Sbjct: 1024 LIKINAKLEQQTDDLEGSLEQEKKLRADLERAKRKLEGDLKMSQESIMDLENEKQQIEEK 1083


>sp|Q70YC5|ZN365_HUMAN Protein ZNF365 OS=Homo sapiens GN=ZNF365 PE=1
           SV=2
          Length = 407

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 18/59 (30%), Positives = 31/59 (52%)
 Frame = -3

Query: 329 VRSQAKLELHTDSRDGSRSGNTQNQTDIRTSRSKETAAVSLSRKGSLAIEKLKRSQEDR 153
           V++   ++LH DS DG+RSG       + TS +K +    +  K +  +E + R+ E R
Sbjct: 126 VQTYTAMDLHADSLDGTRSG-----PGLPTSDTKASFEAHVREKFNRMVEAVDRTIEKR 179


>sp|Q8VIF2|TSSP2_MOUSE Testis serine protease 2 OS=Mus musculus
           GN=Tessp2 PE=2 SV=1
          Length = 335

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +3

Query: 300 VQLQLRLTSHNCPRWNTSLLEPGRTLFVTPTFSRT 404
           +Q  +++   +  R NTSL+ P +T+FV P FS T
Sbjct: 125 IQYNVKVGDRSVYRQNTSLVIPIKTIFVHPKFSTT 159


>sp|Q9QX47|SON_MOUSE SON protein OS=Mus musculus GN=Son PE=1 SV=1
          Length = 2404

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
 Frame = -3

Query: 398  TEGRSNKKRSARFQKGGVPTRTIVRSQAKLELHTDSRDGSRSGNTQNQTDIRTSR----S 231
            +  +S  +RS   +K     +   +S+ +    + SRD  ++   +++T  R SR    S
Sbjct: 1861 SRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKAARARSRTPSRRSRSHTPS 1920

Query: 230  KETAAVSLSRKGSLAIEKLKRSQ 162
            +   ++S+ R+ S +I   +RS+
Sbjct: 1921 RRRRSISVGRRRSFSISPSRRSR 1943


>sp|P02562|MYSS_RABIT Myosin heavy chain, skeletal muscle
           (Fragments) OS=Oryctolagus cuniculus PE=1 SV=2
          Length = 1084

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 14/61 (22%), Positives = 33/61 (54%)
 Frame = -3

Query: 335 TIVRSQAKLELHTDSRDGSRSGNTQNQTDIRTSRSKETAAVSLSRKGSLAIEKLKRSQED 156
           T+ +++ KLE   D  +GS     + + D+  ++ K    + L+++ S+ IE  K+  ++
Sbjct: 177 TLTKAKTKLEQQVDDLEGSLEQEKKIRMDLERAKRKLEGDLKLAQETSMDIENDKQQLDE 236

Query: 155 R 153
           +
Sbjct: 237 K 237


>sp|P13542|MYH8_MOUSE Myosin-8 OS=Mus musculus GN=Myh8 PE=2 SV=2
          Length = 1937

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 13/61 (21%), Positives = 33/61 (54%)
 Frame = -3

Query: 335  TIVRSQAKLELHTDSRDGSRSGNTQNQTDIRTSRSKETAAVSLSRKGSLAIEKLKRSQED 156
            T+ +++ KLE   D  +GS     + + D+  ++ K    + L+++ ++ IE  K+  ++
Sbjct: 1022 TLTKAKTKLEQQVDDLEGSLEQEKKLRMDLERAKRKLEGDLKLAQESTMDIENDKQQLDE 1081

Query: 155  R 153
            +
Sbjct: 1082 K 1082


>sp|P04460|MYH6_RABIT Myosin-6 (Fragment) OS=Oryctolagus cuniculus
           GN=MYH6 PE=2 SV=1
          Length = 465

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 14/61 (22%), Positives = 32/61 (52%)
 Frame = -3

Query: 335 TIVRSQAKLELHTDSRDGSRSGNTQNQTDIRTSRSKETAAVSLSRKGSLAIEKLKRSQED 156
           T+ +++ KLE   D  +GS     + + D+  ++ K    + L+++  + +E  K+  E+
Sbjct: 216 TLTKAKLKLEQQVDDLEGSLEQEKKVRMDLERAKRKLEGDLKLTQESIMDLENDKQQLEE 275

Query: 155 R 153
           R
Sbjct: 276 R 276
tr_hit_id A8P7U0
Definition tr|A8P7U0|A8P7U0_COPC7 Predicted protein OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003)
Align length 86
Score (bit) 34.7
E-value 2.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916254|Adiantum capillus-veneris mRNA, clone:
YMU001_000085_C01.
         (445 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A8P7U0|A8P7U0_COPC7 Predicted protein OS=Coprinopsis cinerea ...    35   2.4  
tr|B6M7G9|B6M7G9_BRAFL Putative uncharacterized protein OS=Branc...    34   4.1  
tr|B7HEC3|B7HEC3_BACCE Transcriptional regulator OS=Bacillus cer...    33   9.1  
tr|Q22ZH2|Q22ZH2_TETTH Putative uncharacterized protein OS=Tetra...    33   9.2  
tr|B4NKF5|B4NKF5_DROWI GK13948 OS=Drosophila willistoni GN=GK139...    33   9.2  

>tr|A8P7U0|A8P7U0_COPC7 Predicted protein OS=Coprinopsis cinerea
            (strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_06637 PE=4
            SV=1
          Length = 1042

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
 Frame = -3

Query: 389  RSNKKRSARFQKGGVPTRTIVRSQAKLELHTDSRDGSRSGNTQNQTDIRTSRSKETAAVS 210
            RSN KR A  +K   P R +  ++  LE  + S DGS   +     D+R  R+ ETA  S
Sbjct: 935  RSNFKRLATQRKNLRPLRPMSIAEKLLESQSASGDGSDGSSESRADDLR--RALETALGS 992

Query: 209  LSRKGSLA-------IEKLKRSQEDR 153
            L+    +         E++KR QED+
Sbjct: 993  LNLLNGMYEMRETRWQEEMKRMQEDK 1018


>tr|B6M7G9|B6M7G9_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_79106 PE=4 SV=1
          Length = 911

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 16/48 (33%), Positives = 27/48 (56%)
 Frame = -3

Query: 299 TDSRDGSRSGNTQNQTDIRTSRSKETAAVSLSRKGSLAIEKLKRSQED 156
           TD R+  RSG+     D++++R + T+  SLSR+ + A    +   ED
Sbjct: 725 TDIRNVRRSGSVTENLDVKSARQRNTSQSSLSRQSNSACGSTRNGVED 772


>tr|B7HEC3|B7HEC3_BACCE Transcriptional regulator OS=Bacillus cereus
           B4264 GN=BCB4264_A5238 PE=4 SV=1
          Length = 304

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 16/59 (27%), Positives = 29/59 (49%)
 Frame = -2

Query: 342 NEDNCEKSSEVGVAHRFKRWQSFW*YTESNRYQDFKIEGNGSSKLVKEGFLGN*EIEEE 166
           NE    +   + + ++F+ W  +    E   Y++F+I       L +EGFL   EI++E
Sbjct: 151 NEFTSREVEPIHLHYKFRNWYMYGYCRERQNYREFRISRMMGVTLTQEGFLQKHEIKDE 209


>tr|Q22ZH2|Q22ZH2_TETTH Putative uncharacterized protein
           OS=Tetrahymena thermophila SB210 GN=TTHERM_01094880 PE=4
           SV=1
          Length = 656

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 19/47 (40%), Positives = 31/47 (65%)
 Frame = -3

Query: 332 IVRSQAKLELHTDSRDGSRSGNTQNQTDIRTSRSKETAAVSLSRKGS 192
           +V ++A  EL T S++  +  NTQNQ D ++S S++ + VS + KGS
Sbjct: 608 VVHARADNELPTISKE--KHNNTQNQGDNKSSHSQQHSQVSGASKGS 652


>tr|B4NKF5|B4NKF5_DROWI GK13948 OS=Drosophila willistoni GN=GK13948
           PE=4 SV=1
          Length = 362

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 28/79 (35%), Positives = 39/79 (49%)
 Frame = -3

Query: 398 TEGRSNKKRSARFQKGGVPTRTIVRSQAKLELHTDSRDGSRSGNTQNQTDIRTSRSKETA 219
           +  RSNK R     K    +RT  RS  +     DSR  SRS N++ ++  R SRSK   
Sbjct: 265 SRSRSNKSRDVSKSKSKSHSRTRSRSPKR---ERDSRSRSRS-NSKRESRSR-SRSKSNR 319

Query: 218 AVSLSRKGSLAIEKLKRSQ 162
             S SR  S +++   RS+
Sbjct: 320 RDSRSRDRSASVDNKSRSR 338