BP916264
Clone id YMU001_000085_D05
Library
Length 481
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000085_D05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GCTTCTCTTCCTAGCCTGGCCAGATCCCAGGAGAATTTTTCAGAGGCGTTGCTTCATCAA
TTGTCCCTTGCAATGGTTCATCCGGACAGTGATACCCGAGTGGGTGCACATGACATTTGT
GGCATTGTATTGAGGTCTCTGTCATACCGGAGCGATGAACTTATTAGTTCTGGAGCCCTC
ACAAAGGATCTTAAGAAGAGTTTGTTGAAAAGCGCATCAGCTCTTACTGTGGCCAATGTG
CTACTTGGGCCCCTTATAAAGGAAGATGGTCTTTCTCATGTACTAAATACTAGTCTGAGT
GGAAAATGGGAGCAAGCAAATGGAAACATACCATTTGGGTTGACATTAGGAACGACCGAA
AACATGGATAGCAAGCAAGATTTTGCACGAGATGACGTGTTGAAAGTAGAAAGTAGAAAC
CCAGTCATCTTCAGTGAGGAACTGGTGAGTCTCTCTACATGTGACATCATACATCATCAC
A
■■Homology search results ■■ -
sp_hit_id Q6PCS4
Definition sp|Q6PCS4|RHG29_DANRE Rho GTPase-activating protein 29 OS=Danio rerio
Align length 48
Score (bit) 30.0
E-value 5.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916264|Adiantum capillus-veneris mRNA, clone:
YMU001_000085_D05.
(481 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6PCS4|RHG29_DANRE Rho GTPase-activating protein 29 OS=Danio ... 30 5.7

>sp|Q6PCS4|RHG29_DANRE Rho GTPase-activating protein 29 OS=Danio
rerio GN=arhgap29 PE=2 SV=1
Length = 1337

Score = 30.0 bits (66), Expect = 5.7
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Frame = -1

Query: 157 HRSGMTETSIQCHKCHVHPLGYHCPDEPLQGT-----IDEATPLKNSP 29
H + E S+ CHK + L C + LQG ID A +KNSP
Sbjct: 700 HGAECEECSLACHKKCLETLAIQCGHKKLQGRLHLFGIDFAQVVKNSP 747


tr_hit_id Q6K7F3
Definition tr|Q6K7F3|Q6K7F3_ORYSJ Os02g0780500 protein OS=Oryza sativa subsp. japonica
Align length 135
Score (bit) 53.9
E-value 4.0e-06
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916264|Adiantum capillus-veneris mRNA, clone:
YMU001_000085_D05.
(481 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q6K7F3|Q6K7F3_ORYSJ Os02g0780500 protein OS=Oryza sativa subs... 54 4e-06
tr|Q6YXW5|Q6YXW5_ORYSJ Os02g0143200 protein OS=Oryza sativa subs... 52 1e-05
tr|Q0WQP8|Q0WQP8_ARATH Putative uncharacterized protein At2g4183... 52 1e-05
tr|B8AHG5|B8AHG5_ORYSI Putative uncharacterized protein OS=Oryza... 52 1e-05
tr|A3A324|A3A324_ORYSJ Putative uncharacterized protein OS=Oryza... 52 1e-05
tr|A7QM62|A7QM62_VITVI Chromosome chr5 scaffold_124, whole genom... 51 2e-05
tr|A7PWD9|A7PWD9_VITVI Chromosome chr8 scaffold_34, whole genome... 51 2e-05
tr|Q52UN1|Q52UN1_CUCSA Cyclin-related protein 1 (Fragment) OS=Cu... 49 9e-05
tr|Q6ZIX9|Q6ZIX9_ORYSJ Os07g0205900 protein OS=Oryza sativa subs... 49 1e-04
tr|B8B899|B8B899_ORYSI Putative uncharacterized protein OS=Oryza... 49 1e-04
tr|A3BHN0|A3BHN0_ORYSJ Putative uncharacterized protein OS=Oryza... 49 1e-04
tr|Q5N857|Q5N857_ORYSJ Cyclin-like (Os01g0898300 protein) OS=Ory... 46 8e-04
tr|O22937|O22937_ARATH Putative uncharacterized protein At2g4183... 45 0.001
tr|Q8GZ47|Q8GZ47_ARATH Putative uncharacterized protein At5g2685... 44 0.003
tr|O04631|O04631_ARATH Putative uncharacterized protein F2P16.24... 44 0.003
tr|Q3E982|Q3E982_ARATH Uncharacterized protein At5g21080.1 OS=Ar... 43 0.007
tr|A3A0J6|A3A0J6_ORYSJ Putative uncharacterized protein OS=Oryza... 43 0.007
tr|Q9LNE9|Q9LNE9_ARATH T21E18.2 protein OS=Arabidopsis thaliana ... 42 0.015
tr|Q94KD1|Q94KD1_ARATH At1g05960/T21E18_20 OS=Arabidopsis thalia... 42 0.015
tr|Q10MI0|Q10MI0_ORYSJ Os03g0308200 protein OS=Oryza sativa subs... 41 0.026
tr|Q10MH9|Q10MH9_ORYSJ Cyclin, putative, expressed OS=Oryza sati... 41 0.026
tr|B8AMH6|B8AMH6_ORYSI Putative uncharacterized protein OS=Oryza... 41 0.026
tr|A9SVM6|A9SVM6_PHYPA Predicted protein OS=Physcomitrella paten... 41 0.026
tr|A7Q273|A7Q273_VITVI Chromosome chr13 scaffold_45, whole genom... 41 0.026
tr|A3AH82|A3AH82_ORYSJ Putative uncharacterized protein OS=Oryza... 41 0.026
tr|A2XFV6|A2XFV6_ORYSI Putative uncharacterized protein OS=Oryza... 41 0.026
tr|A7PRR3|A7PRR3_VITVI Chromosome chr14 scaffold_27, whole genom... 40 0.057
tr|A5ARA5|A5ARA5_VITVI Putative uncharacterized protein OS=Vitis... 40 0.057
tr|A9SMK2|A9SMK2_PHYPA Predicted protein OS=Physcomitrella paten... 38 0.22
tr|A3ABY7|A3ABY7_ORYSJ Putative uncharacterized protein OS=Oryza... 38 0.22

>tr|Q6K7F3|Q6K7F3_ORYSJ Os02g0780500 protein OS=Oryza sativa subsp.
japonica GN=OJ1293_A01.36 PE=2 SV=1
Length = 997

Score = 53.9 bits (128), Expect = 4e-06
Identities = 43/135 (31%), Positives = 56/135 (41%), Gaps = 8/135 (5%)
Frame = +1

Query: 1 ASLPSLARSQENFSEALLHQLSLAMVHPDSDTRVGAHDICGIVLRSLSYRSDELISSGXX 180
ASLP+L + F EAL HQL LAMV+PD +T +GAH I +VL S S
Sbjct: 477 ASLPNLLYQSKAFPEALFHQLLLAMVYPDCETHLGAHRIFSVVLVPSSVSPCSFSGSSQT 536

Query: 181 XXXXXXXXXXXXXXXXVANVLLGPLIKEDGLSHVLNTSLSG--------KWEQANGNIPF 336
++ L +K D S N+ L G +Q NGN P
Sbjct: 537 SKIGIKRTLSRTTSVFSSSAALFGKLKRDVFSFRENSRLDGTNLIPISENSDQINGNDPK 596

Query: 337 GLTLGTTENMDSKQD 381
T + M S +D
Sbjct: 597 LFKSQTIQRMYSAKD 611


>tr|Q6YXW5|Q6YXW5_ORYSJ Os02g0143200 protein OS=Oryza sativa subsp.
japonica GN=OSJNBa0064G16.4 PE=4 SV=1
Length = 1035

Score = 52.0 bits (123), Expect = 1e-05
Identities = 25/43 (58%), Positives = 31/43 (72%)
Frame = +1

Query: 4 SLPSLARSQENFSEALLHQLSLAMVHPDSDTRVGAHDICGIVL 132
S+P+L+ + F EAL HQL LAMVHPD +TRV AH I +VL
Sbjct: 479 SIPNLSYRNKVFPEALFHQLLLAMVHPDHETRVSAHRIFSVVL 521


>tr|Q0WQP8|Q0WQP8_ARATH Putative uncharacterized protein At2g41830
OS=Arabidopsis thaliana GN=At2g41830 PE=2 SV=1
Length = 1025

Score = 52.0 bits (123), Expect = 1e-05
Identities = 25/44 (56%), Positives = 30/44 (68%)
Frame = +1

Query: 1 ASLPSLARSQENFSEALLHQLSLAMVHPDSDTRVGAHDICGIVL 132
AS+P+L + F EAL HQL AMVHPD TR+GAH I +VL
Sbjct: 475 ASIPNLQYQNKAFPEALFHQLLQAMVHPDHKTRIGAHRIFSVVL 518


>tr|B8AHG5|B8AHG5_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_05818 PE=4 SV=1
Length = 1056

Score = 52.0 bits (123), Expect = 1e-05
Identities = 25/43 (58%), Positives = 31/43 (72%)
Frame = +1

Query: 4 SLPSLARSQENFSEALLHQLSLAMVHPDSDTRVGAHDICGIVL 132
S+P+L+ + F EAL HQL LAMVHPD +TRV AH I +VL
Sbjct: 500 SIPNLSYRNKVFPEALFHQLLLAMVHPDHETRVSAHRIFSVVL 542


>tr|A3A324|A3A324_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_005196 PE=4 SV=1
Length = 1022

Score = 52.0 bits (123), Expect = 1e-05
Identities = 25/43 (58%), Positives = 31/43 (72%)
Frame = +1

Query: 4 SLPSLARSQENFSEALLHQLSLAMVHPDSDTRVGAHDICGIVL 132
S+P+L+ + F EAL HQL LAMVHPD +TRV AH I +VL
Sbjct: 466 SIPNLSYRNKVFPEALFHQLLLAMVHPDHETRVSAHRIFSVVL 508


>tr|A7QM62|A7QM62_VITVI Chromosome chr5 scaffold_124, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00001935001
PE=4 SV=1
Length = 944

Score = 51.2 bits (121), Expect = 2e-05
Identities = 23/44 (52%), Positives = 32/44 (72%)
Frame = +1

Query: 1 ASLPSLARSQENFSEALLHQLSLAMVHPDSDTRVGAHDICGIVL 132
+S+P+++ ++ F EAL HQL LAM HPD +TRVGAH + VL
Sbjct: 467 SSVPNISYHKKAFPEALFHQLLLAMAHPDHETRVGAHHVFSTVL 510


>tr|A7PWD9|A7PWD9_VITVI Chromosome chr8 scaffold_34, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00025573001
PE=4 SV=1
Length = 996

Score = 51.2 bits (121), Expect = 2e-05
Identities = 27/45 (60%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Frame = +1

Query: 1 ASLPSLARSQEN-FSEALLHQLSLAMVHPDSDTRVGAHDICGIVL 132
AS+P+L S + F EAL HQL AMVHPD +TRVGAH I +VL
Sbjct: 472 ASIPNLCMSTNSAFPEALFHQLLPAMVHPDHETRVGAHRIFSVVL 516


>tr|Q52UN1|Q52UN1_CUCSA Cyclin-related protein 1 (Fragment)
OS=Cucumis sativus GN=M1 PE=2 SV=1
Length = 489

Score = 49.3 bits (116), Expect = 9e-05
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = +1

Query: 37 FSEALLHQLSLAMVHPDSDTRVGAHDICGIVL 132
F +AL HQL LAM HPD +TR+GAHDI IVL
Sbjct: 11 FPDALFHQLLLAMAHPDHETRIGAHDIFSIVL 42


>tr|Q6ZIX9|Q6ZIX9_ORYSJ Os07g0205900 protein OS=Oryza sativa subsp.
japonica GN=OJ1119_B04.8 PE=2 SV=1
Length = 1066

Score = 48.9 bits (115), Expect = 1e-04
Identities = 23/44 (52%), Positives = 29/44 (65%)
Frame = +1

Query: 1 ASLPSLARSQENFSEALLHQLSLAMVHPDSDTRVGAHDICGIVL 132
AS+P++ + F EAL HQL L M+HPD + RV AH I IVL
Sbjct: 480 ASVPNITYQNKVFPEALFHQLLLTMIHPDHEARVAAHRIFAIVL 523


>tr|B8B899|B8B899_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_25322 PE=4 SV=1
Length = 1066

Score = 48.9 bits (115), Expect = 1e-04
Identities = 23/44 (52%), Positives = 29/44 (65%)
Frame = +1

Query: 1 ASLPSLARSQENFSEALLHQLSLAMVHPDSDTRVGAHDICGIVL 132
AS+P++ + F EAL HQL L M+HPD + RV AH I IVL
Sbjct: 480 ASVPNITYQNKVFPEALFHQLLLTMIHPDHEARVAAHRIFAIVL 523