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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916266
Clone id YMU001_000085_D09
Library
Length 448
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000085_D09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
ATGCTTCGTAGACATCATCATATACACAAGAGGGTATAACTTTGACTTCATTTTTTAACT
TCTTTGGGATAGAGCCGGTAAGCCGGGAAGAGGGTATAACCATGGATATTGGTTGTGCCT
TTGTGGTCTCTGGCTTTTCTTCGAGTGGTCACTTTACCTTTGCTTATAGCAATTGGTTGT
TATAAAATATCTTCTTTGCTCCGTAATACAACAGATTATATTGACTAATGAACCTCAGCT
TTCTACAGGCCTTGTATCTGTAAGATGAAAATTTGGAAAACTCCTCAAGATACTACACCA
TGGGAGAGGAGACCTACAGCCACAAATGGTCCTTGGTAGGAAAGGACTGACTCCTTGGAT
TTCTTCAAGTGGCAGAAGCCCCTCTCTTCTATTAACATACTCTACAGCTTCTTCTGCAGT
AACCCGGCCGCTCTGATGTACCAATCAT
■■Homology search results ■■ -
sp_hit_id O08742
Definition sp|O08742|GPV_MOUSE Platelet glycoprotein V OS=Mus musculus
Align length 16
Score (bit) 32.3
E-value 0.95
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916266|Adiantum capillus-veneris mRNA, clone:
YMU001_000085_D09.
         (448 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O08742|GPV_MOUSE Platelet glycoprotein V OS=Mus musculus GN=G...    32   0.95 
sp|O08770|GPV_RAT Platelet glycoprotein V OS=Rattus norvegicus G...    32   1.2  
sp|Q9M0E6|FBK90_ARATH F-box/Kelch-repeat protein At4g29370 OS=Ar...    30   4.7  
sp|Q3B820|F161A_HUMAN UPF0564 protein FAM161A OS=Homo sapiens GN...    30   4.7  
sp|O03199|ATP8_CERSI ATP synthase protein 8 OS=Ceratotherium sim...    30   4.7  
sp|Q8BG19|TMTC4_MOUSE Transmembrane and TPR repeat-containing pr...    30   6.1  
sp|Q5T4D3|TMTC4_HUMAN Transmembrane and TPR repeat-containing pr...    30   6.1  
sp|Q5LVN0|DNAE2_SILPO Error-prone DNA polymerase OS=Silicibacter...    30   6.1  
sp|Q8K327|ZN828_MOUSE Zinc finger protein 828 OS=Mus musculus GN...    29   8.0  

>sp|O08742|GPV_MOUSE Platelet glycoprotein V OS=Mus musculus GN=Gp5
           PE=2 SV=1
          Length = 567

 Score = 32.3 bits (72), Expect = 0.95
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +2

Query: 101 HGYWLCLCGLWLFFEW 148
           H  WLC CGLW F +W
Sbjct: 420 HNPWLCDCGLWRFLQW 435


>sp|O08770|GPV_RAT Platelet glycoprotein V OS=Rattus norvegicus
           GN=Gp5 PE=2 SV=1
          Length = 567

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +2

Query: 101 HGYWLCLCGLWLFFEW 148
           H  WLC CGLW F +W
Sbjct: 420 HNPWLCDCGLWPFLQW 435


>sp|Q9M0E6|FBK90_ARATH F-box/Kelch-repeat protein At4g29370
           OS=Arabidopsis thaliana GN=At4g29370 PE=2 SV=1
          Length = 378

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +2

Query: 38  NFDFIF*LLWDRAGKPGRGYNHGYWLCLCGLWLFFEWSLY 157
           NF     +LWDR  +PGR  N   W  +  L   FE  ++
Sbjct: 313 NFGGKLAILWDRFERPGRSENKNIWCAMVALNRDFEGEIW 352


>sp|Q3B820|F161A_HUMAN UPF0564 protein FAM161A OS=Homo sapiens
           GN=FAM161A PE=2 SV=2
          Length = 660

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -2

Query: 399 YVNRREGLLPLEEIQGVSPFLPRTICGCRSP 307
           Y N R  L   E +Q  SP   R+ CGCR+P
Sbjct: 379 YRNLRTQLRAQEHLQNSSPLPCRSACGCRNP 409


>sp|O03199|ATP8_CERSI ATP synthase protein 8 OS=Ceratotherium simum
           GN=MT-ATP8 PE=3 SV=1
          Length = 68

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 235 SAFYRPCICKMKIWKTPQDTTPWERRPTATNGP 333
           S +  P   ++K+ KTP  TTPWE + T T  P
Sbjct: 29  SKYSYPSSPELKLTKTPTHTTPWESKWTKTYLP 61


>sp|Q8BG19|TMTC4_MOUSE Transmembrane and TPR repeat-containing
           protein 4 OS=Mus musculus GN=Tmtc4 PE=2 SV=1
          Length = 741

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 4/24 (16%)
 Frame = +2

Query: 95  YNHGY----WLCLCGLWLFFEWSL 154
           YN+ Y    WL LC  WL F+WS+
Sbjct: 318 YNYYYSLNAWLLLCPWWLCFDWSM 341


>sp|Q5T4D3|TMTC4_HUMAN Transmembrane and TPR repeat-containing
           protein 4 OS=Homo sapiens GN=TMTC4 PE=1 SV=2
          Length = 741

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 4/24 (16%)
 Frame = +2

Query: 95  YNHGY----WLCLCGLWLFFEWSL 154
           YN+ Y    WL LC  WL F+WS+
Sbjct: 318 YNYYYSLNAWLLLCPWWLCFDWSM 341


>sp|Q5LVN0|DNAE2_SILPO Error-prone DNA polymerase OS=Silicibacter
           pomeroyi GN=dnaE2 PE=3 SV=1
          Length = 1101

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
 Frame = -2

Query: 426 RVTAEEAVEYVNRREGLLPLEEIQGVSPFLPRTICGCR-----SPLPWCSILR 283
           R+ ++  ++  +R+E   P    +  +P LPR I GCR     SPL W ++ R
Sbjct: 66  RIRSQHRIDSCSRQEVGHPQPIARPEAPRLPRLITGCRLVLRDSPLHWIALPR 118


>sp|Q8K327|ZN828_MOUSE Zinc finger protein 828 OS=Mus musculus
           GN=Znf828 PE=1 SV=1
          Length = 802

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
 Frame = +1

Query: 274 WKT--PQDTTPWERRPTATNGPW 336
           WK   P    PW+  P+AT+GPW
Sbjct: 302 WKPGPPGSPRPWKSSPSATSGPW 324
tr_hit_id Q0V1N7
Definition tr|Q0V1N7|Q0V1N7_PHANO Putative uncharacterized protein OS=Phaeosphaeria nodorum
Align length 53
Score (bit) 34.7
E-value 2.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916266|Adiantum capillus-veneris mRNA, clone:
YMU001_000085_D09.
         (448 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q0V1N7|Q0V1N7_PHANO Putative uncharacterized protein OS=Phaeo...    35   2.5  
tr|Q8Z8Q5|Q8Z8Q5_SALTI Allantoate amidohydrolase OS=Salmonella t...    34   3.2  
tr|A8U5X8|A8U5X8_9LACT Flagellum-specific ATP synthase OS=Carnob...    34   4.2  
tr|Q28Y05|Q28Y05_DROPS Ubiquitin-activating enzyme E1 OS=Drosoph...    33   5.5  
tr|B4GGE1|B4GGE1_DROPE GL17328 OS=Drosophila persimilis GN=GL173...    33   5.5  
tr|B8N0J1|B8N0J1_ASPFL Putative uncharacterized protein OS=Asper...    33   7.2  
tr|B4K2T9|B4K2T9_DROGR GH23328 OS=Drosophila grimshawi GN=GH2332...    33   9.4  
tr|B4JVX7|B4JVX7_DROGR GH22854 OS=Drosophila grimshawi GN=GH2285...    33   9.4  

>tr|Q0V1N7|Q0V1N7_PHANO Putative uncharacterized protein
            OS=Phaeosphaeria nodorum GN=SNOG_02077 PE=4 SV=2
          Length = 1045

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 21/53 (39%), Positives = 26/53 (49%)
 Frame = +1

Query: 265  MKIWKTPQDTTPWERRPTATNGPW*ERTDSLDFFKWQKPLSSINILYSFFCSN 423
            MKI    Q  TPW      T GPW    DSL F  W   L++ +++Y F  SN
Sbjct: 868  MKICVEMQRPTPWR---ADTIGPW---LDSLSFLTWLGALTTSSLVYMFHNSN 914


>tr|Q8Z8Q5|Q8Z8Q5_SALTI Allantoate amidohydrolase OS=Salmonella
           typhi GN=allC PE=4 SV=1
          Length = 411

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 22/80 (27%), Positives = 37/80 (46%)
 Frame = -2

Query: 411 EAVEYVNRREGLLPLEEIQGVSPFLPRTICGCRSPLPWCSILRSFPNFHLTDTRPVES*G 232
           E V Y+   +G   ++ +Q     LP       +PL   + +R+F   H+     +ES G
Sbjct: 148 EEVRYIQDAKGTGVVDAMQACGFTLPA------APLAARTDIRAFVELHIEQGCVLESNG 201

Query: 231 SLVNIICCITEQRRYFITTN 172
             + ++  I  QRRY +T N
Sbjct: 202 QSIGVVNAIVGQRRYTVTLN 221


>tr|A8U5X8|A8U5X8_9LACT Flagellum-specific ATP synthase
           OS=Carnobacterium sp. AT7 GN=CAT7_09395 PE=3 SV=1
          Length = 442

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = -2

Query: 444 LVHQSGRVTAEEAVEYVNRREGLLPLEEIQGVSP 343
           L+  SGRV   E V +V+    L+PL+E++G+ P
Sbjct: 49  LIKSSGRVALSEVVGFVDETVLLMPLDELEGIGP 82


>tr|Q28Y05|Q28Y05_DROPS Ubiquitin-activating enzyme E1 OS=Drosophila
            pseudoobscura pseudoobscura GN=GA14681 PE=3 SV=2
          Length = 1184

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
 Frame = -2

Query: 432  SGRVTAEEAVEYVNRREGLLPLEEIQGVSP----FLPRTICGCRSPLPWCSILRSFPNFH 265
            +G +T +E + Y   +E L      QGVS     F+P+  C  R PLP   ++R      
Sbjct: 1093 TGELTLQEFLNYFEEKEKLKITMLSQGVSMLYSFFMPKAKCSERLPLPMSEVVRR----- 1147

Query: 264  LTDTRPVES-*GSLVNIICC 208
                R +ES   SLV  ICC
Sbjct: 1148 -VSKRRIESHERSLVFEICC 1166


>tr|B4GGE1|B4GGE1_DROPE GL17328 OS=Drosophila persimilis GN=GL17328
           PE=4 SV=1
          Length = 627

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
 Frame = -2

Query: 432 SGRVTAEEAVEYVNRREGLLPLEEIQGVSP----FLPRTICGCRSPLPWCSILRSFPNFH 265
           +G +T +E + Y   +E L      QGVS     F+P+  C  R PLP   ++R      
Sbjct: 536 TGELTLQEFLNYFEEKEKLKITMLSQGVSMLYSFFMPKAKCSERLPLPMSEVVRR----- 590

Query: 264 LTDTRPVES-*GSLVNIICC 208
               R +ES   SLV  ICC
Sbjct: 591 -VSKRRIESHERSLVFEICC 609


>tr|B8N0J1|B8N0J1_ASPFL Putative uncharacterized protein
           OS=Aspergillus flavus NRRL3357 GN=AFLA_024340 PE=4 SV=1
          Length = 228

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +2

Query: 62  LWDRAGKPGRGYNHGYWLCLCGLWLF-FEWSL 154
           +W   GK GRGY    W  +CG ++F F+WSL
Sbjct: 172 VWSWMGKVGRGY----WCWVCGCYMFYFDWSL 199


>tr|B4K2T9|B4K2T9_DROGR GH23328 OS=Drosophila grimshawi GN=GH23328
           PE=4 SV=1
          Length = 143

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
 Frame = -2

Query: 432 SGRVTAEEAVEYVNRREGLLPLEEIQGVSP----FLPRTICGCRSPLPWCSILRSFPNFH 265
           +G ++ +E + Y + +E L      QGVS     F+P+  C  R PLP   ++R      
Sbjct: 52  TGEMSLQEFLNYFDEKEKLKITMLSQGVSMLYSFFMPKAKCSERLPLPMSEVVRRVSKRR 111

Query: 264 LTDTRPVES*GSLVNIICC 208
           +    P E   SLV  ICC
Sbjct: 112 I---EPYER--SLVFEICC 125


>tr|B4JVX7|B4JVX7_DROGR GH22854 OS=Drosophila grimshawi GN=GH22854
            PE=4 SV=1
          Length = 1244

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
 Frame = -2

Query: 432  SGRVTAEEAVEYVNRREGLLPLEEIQGVSP----FLPRTICGCRSPLPWCSILRSFPNFH 265
            +G ++ +E + Y + +E L      QGVS     F+P+  C  R PLP   ++R      
Sbjct: 1153 TGEMSLQEFLNYFDEKEKLKITMLSQGVSMLYSFFMPKAKCSERLPLPMSEVVRRVSKRR 1212

Query: 264  LTDTRPVES*GSLVNIICC 208
            +    P E   SLV  ICC
Sbjct: 1213 I---EPYER--SLVFEICC 1226