BP916266
Clone id YMU001_000085_D09
Library
Length 448
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000085_D09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
ATGCTTCGTAGACATCATCATATACACAAGAGGGTATAACTTTGACTTCATTTTTTAACT
TCTTTGGGATAGAGCCGGTAAGCCGGGAAGAGGGTATAACCATGGATATTGGTTGTGCCT
TTGTGGTCTCTGGCTTTTCTTCGAGTGGTCACTTTACCTTTGCTTATAGCAATTGGTTGT
TATAAAATATCTTCTTTGCTCCGTAATACAACAGATTATATTGACTAATGAACCTCAGCT
TTCTACAGGCCTTGTATCTGTAAGATGAAAATTTGGAAAACTCCTCAAGATACTACACCA
TGGGAGAGGAGACCTACAGCCACAAATGGTCCTTGGTAGGAAAGGACTGACTCCTTGGAT
TTCTTCAAGTGGCAGAAGCCCCTCTCTTCTATTAACATACTCTACAGCTTCTTCTGCAGT
AACCCGGCCGCTCTGATGTACCAATCAT
■■Homology search results ■■ -
sp_hit_id O08742
Definition sp|O08742|GPV_MOUSE Platelet glycoprotein V OS=Mus musculus
Align length 16
Score (bit) 32.3
E-value 0.95
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916266|Adiantum capillus-veneris mRNA, clone:
YMU001_000085_D09.
(448 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O08742|GPV_MOUSE Platelet glycoprotein V OS=Mus musculus GN=G... 32 0.95
sp|O08770|GPV_RAT Platelet glycoprotein V OS=Rattus norvegicus G... 32 1.2
sp|Q9M0E6|FBK90_ARATH F-box/Kelch-repeat protein At4g29370 OS=Ar... 30 4.7
sp|Q3B820|F161A_HUMAN UPF0564 protein FAM161A OS=Homo sapiens GN... 30 4.7
sp|O03199|ATP8_CERSI ATP synthase protein 8 OS=Ceratotherium sim... 30 4.7
sp|Q8BG19|TMTC4_MOUSE Transmembrane and TPR repeat-containing pr... 30 6.1
sp|Q5T4D3|TMTC4_HUMAN Transmembrane and TPR repeat-containing pr... 30 6.1
sp|Q5LVN0|DNAE2_SILPO Error-prone DNA polymerase OS=Silicibacter... 30 6.1
sp|Q8K327|ZN828_MOUSE Zinc finger protein 828 OS=Mus musculus GN... 29 8.0

>sp|O08742|GPV_MOUSE Platelet glycoprotein V OS=Mus musculus GN=Gp5
PE=2 SV=1
Length = 567

Score = 32.3 bits (72), Expect = 0.95
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2

Query: 101 HGYWLCLCGLWLFFEW 148
H WLC CGLW F +W
Sbjct: 420 HNPWLCDCGLWRFLQW 435


>sp|O08770|GPV_RAT Platelet glycoprotein V OS=Rattus norvegicus
GN=Gp5 PE=2 SV=1
Length = 567

Score = 32.0 bits (71), Expect = 1.2
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2

Query: 101 HGYWLCLCGLWLFFEW 148
H WLC CGLW F +W
Sbjct: 420 HNPWLCDCGLWPFLQW 435


>sp|Q9M0E6|FBK90_ARATH F-box/Kelch-repeat protein At4g29370
OS=Arabidopsis thaliana GN=At4g29370 PE=2 SV=1
Length = 378

Score = 30.0 bits (66), Expect = 4.7
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2

Query: 38 NFDFIF*LLWDRAGKPGRGYNHGYWLCLCGLWLFFEWSLY 157
NF +LWDR +PGR N W + L FE ++
Sbjct: 313 NFGGKLAILWDRFERPGRSENKNIWCAMVALNRDFEGEIW 352


>sp|Q3B820|F161A_HUMAN UPF0564 protein FAM161A OS=Homo sapiens
GN=FAM161A PE=2 SV=2
Length = 660

Score = 30.0 bits (66), Expect = 4.7
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -2

Query: 399 YVNRREGLLPLEEIQGVSPFLPRTICGCRSP 307
Y N R L E +Q SP R+ CGCR+P
Sbjct: 379 YRNLRTQLRAQEHLQNSSPLPCRSACGCRNP 409


>sp|O03199|ATP8_CERSI ATP synthase protein 8 OS=Ceratotherium simum
GN=MT-ATP8 PE=3 SV=1
Length = 68

Score = 30.0 bits (66), Expect = 4.7
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1

Query: 235 SAFYRPCICKMKIWKTPQDTTPWERRPTATNGP 333
S + P ++K+ KTP TTPWE + T T P
Sbjct: 29 SKYSYPSSPELKLTKTPTHTTPWESKWTKTYLP 61


>sp|Q8BG19|TMTC4_MOUSE Transmembrane and TPR repeat-containing
protein 4 OS=Mus musculus GN=Tmtc4 PE=2 SV=1
Length = 741

Score = 29.6 bits (65), Expect = 6.1
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 4/24 (16%)
Frame = +2

Query: 95 YNHGY----WLCLCGLWLFFEWSL 154
YN+ Y WL LC WL F+WS+
Sbjct: 318 YNYYYSLNAWLLLCPWWLCFDWSM 341


>sp|Q5T4D3|TMTC4_HUMAN Transmembrane and TPR repeat-containing
protein 4 OS=Homo sapiens GN=TMTC4 PE=1 SV=2
Length = 741

Score = 29.6 bits (65), Expect = 6.1
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 4/24 (16%)
Frame = +2

Query: 95 YNHGY----WLCLCGLWLFFEWSL 154
YN+ Y WL LC WL F+WS+
Sbjct: 318 YNYYYSLNAWLLLCPWWLCFDWSM 341


>sp|Q5LVN0|DNAE2_SILPO Error-prone DNA polymerase OS=Silicibacter
pomeroyi GN=dnaE2 PE=3 SV=1
Length = 1101

Score = 29.6 bits (65), Expect = 6.1
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Frame = -2

Query: 426 RVTAEEAVEYVNRREGLLPLEEIQGVSPFLPRTICGCR-----SPLPWCSILR 283
R+ ++ ++ +R+E P + +P LPR I GCR SPL W ++ R
Sbjct: 66 RIRSQHRIDSCSRQEVGHPQPIARPEAPRLPRLITGCRLVLRDSPLHWIALPR 118


>sp|Q8K327|ZN828_MOUSE Zinc finger protein 828 OS=Mus musculus
GN=Znf828 PE=1 SV=1
Length = 802

Score = 29.3 bits (64), Expect = 8.0
Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Frame = +1

Query: 274 WKT--PQDTTPWERRPTATNGPW 336
WK P PW+ P+AT+GPW
Sbjct: 302 WKPGPPGSPRPWKSSPSATSGPW 324


tr_hit_id Q0V1N7
Definition tr|Q0V1N7|Q0V1N7_PHANO Putative uncharacterized protein OS=Phaeosphaeria nodorum
Align length 53
Score (bit) 34.7
E-value 2.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916266|Adiantum capillus-veneris mRNA, clone:
YMU001_000085_D09.
(448 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q0V1N7|Q0V1N7_PHANO Putative uncharacterized protein OS=Phaeo... 35 2.5
tr|Q8Z8Q5|Q8Z8Q5_SALTI Allantoate amidohydrolase OS=Salmonella t... 34 3.2
tr|A8U5X8|A8U5X8_9LACT Flagellum-specific ATP synthase OS=Carnob... 34 4.2
tr|Q28Y05|Q28Y05_DROPS Ubiquitin-activating enzyme E1 OS=Drosoph... 33 5.5
tr|B4GGE1|B4GGE1_DROPE GL17328 OS=Drosophila persimilis GN=GL173... 33 5.5
tr|B8N0J1|B8N0J1_ASPFL Putative uncharacterized protein OS=Asper... 33 7.2
tr|B4K2T9|B4K2T9_DROGR GH23328 OS=Drosophila grimshawi GN=GH2332... 33 9.4
tr|B4JVX7|B4JVX7_DROGR GH22854 OS=Drosophila grimshawi GN=GH2285... 33 9.4

>tr|Q0V1N7|Q0V1N7_PHANO Putative uncharacterized protein
OS=Phaeosphaeria nodorum GN=SNOG_02077 PE=4 SV=2
Length = 1045

Score = 34.7 bits (78), Expect = 2.5
Identities = 21/53 (39%), Positives = 26/53 (49%)
Frame = +1

Query: 265 MKIWKTPQDTTPWERRPTATNGPW*ERTDSLDFFKWQKPLSSINILYSFFCSN 423
MKI Q TPW T GPW DSL F W L++ +++Y F SN
Sbjct: 868 MKICVEMQRPTPWR---ADTIGPW---LDSLSFLTWLGALTTSSLVYMFHNSN 914


>tr|Q8Z8Q5|Q8Z8Q5_SALTI Allantoate amidohydrolase OS=Salmonella
typhi GN=allC PE=4 SV=1
Length = 411

Score = 34.3 bits (77), Expect = 3.2
Identities = 22/80 (27%), Positives = 37/80 (46%)
Frame = -2

Query: 411 EAVEYVNRREGLLPLEEIQGVSPFLPRTICGCRSPLPWCSILRSFPNFHLTDTRPVES*G 232
E V Y+ +G ++ +Q LP +PL + +R+F H+ +ES G
Sbjct: 148 EEVRYIQDAKGTGVVDAMQACGFTLPA------APLAARTDIRAFVELHIEQGCVLESNG 201

Query: 231 SLVNIICCITEQRRYFITTN 172
+ ++ I QRRY +T N
Sbjct: 202 QSIGVVNAIVGQRRYTVTLN 221


>tr|A8U5X8|A8U5X8_9LACT Flagellum-specific ATP synthase
OS=Carnobacterium sp. AT7 GN=CAT7_09395 PE=3 SV=1
Length = 442

Score = 33.9 bits (76), Expect = 4.2
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = -2

Query: 444 LVHQSGRVTAEEAVEYVNRREGLLPLEEIQGVSP 343
L+ SGRV E V +V+ L+PL+E++G+ P
Sbjct: 49 LIKSSGRVALSEVVGFVDETVLLMPLDELEGIGP 82


>tr|Q28Y05|Q28Y05_DROPS Ubiquitin-activating enzyme E1 OS=Drosophila
pseudoobscura pseudoobscura GN=GA14681 PE=3 SV=2
Length = 1184

Score = 33.5 bits (75), Expect = 5.5
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Frame = -2

Query: 432 SGRVTAEEAVEYVNRREGLLPLEEIQGVSP----FLPRTICGCRSPLPWCSILRSFPNFH 265
+G +T +E + Y +E L QGVS F+P+ C R PLP ++R
Sbjct: 1093 TGELTLQEFLNYFEEKEKLKITMLSQGVSMLYSFFMPKAKCSERLPLPMSEVVRR----- 1147

Query: 264 LTDTRPVES-*GSLVNIICC 208
R +ES SLV ICC
Sbjct: 1148 -VSKRRIESHERSLVFEICC 1166


>tr|B4GGE1|B4GGE1_DROPE GL17328 OS=Drosophila persimilis GN=GL17328
PE=4 SV=1
Length = 627

Score = 33.5 bits (75), Expect = 5.5
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Frame = -2

Query: 432 SGRVTAEEAVEYVNRREGLLPLEEIQGVSP----FLPRTICGCRSPLPWCSILRSFPNFH 265
+G +T +E + Y +E L QGVS F+P+ C R PLP ++R
Sbjct: 536 TGELTLQEFLNYFEEKEKLKITMLSQGVSMLYSFFMPKAKCSERLPLPMSEVVRR----- 590

Query: 264 LTDTRPVES-*GSLVNIICC 208
R +ES SLV ICC
Sbjct: 591 -VSKRRIESHERSLVFEICC 609


>tr|B8N0J1|B8N0J1_ASPFL Putative uncharacterized protein
OS=Aspergillus flavus NRRL3357 GN=AFLA_024340 PE=4 SV=1
Length = 228

Score = 33.1 bits (74), Expect = 7.2
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2

Query: 62 LWDRAGKPGRGYNHGYWLCLCGLWLF-FEWSL 154
+W GK GRGY W +CG ++F F+WSL
Sbjct: 172 VWSWMGKVGRGY----WCWVCGCYMFYFDWSL 199


>tr|B4K2T9|B4K2T9_DROGR GH23328 OS=Drosophila grimshawi GN=GH23328
PE=4 SV=1
Length = 143

Score = 32.7 bits (73), Expect = 9.4
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = -2

Query: 432 SGRVTAEEAVEYVNRREGLLPLEEIQGVSP----FLPRTICGCRSPLPWCSILRSFPNFH 265
+G ++ +E + Y + +E L QGVS F+P+ C R PLP ++R
Sbjct: 52 TGEMSLQEFLNYFDEKEKLKITMLSQGVSMLYSFFMPKAKCSERLPLPMSEVVRRVSKRR 111

Query: 264 LTDTRPVES*GSLVNIICC 208
+ P E SLV ICC
Sbjct: 112 I---EPYER--SLVFEICC 125


>tr|B4JVX7|B4JVX7_DROGR GH22854 OS=Drosophila grimshawi GN=GH22854
PE=4 SV=1
Length = 1244

Score = 32.7 bits (73), Expect = 9.4
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = -2

Query: 432 SGRVTAEEAVEYVNRREGLLPLEEIQGVSP----FLPRTICGCRSPLPWCSILRSFPNFH 265
+G ++ +E + Y + +E L QGVS F+P+ C R PLP ++R
Sbjct: 1153 TGEMSLQEFLNYFDEKEKLKITMLSQGVSMLYSFFMPKAKCSERLPLPMSEVVRRVSKRR 1212

Query: 264 LTDTRPVES*GSLVNIICC 208
+ P E SLV ICC
Sbjct: 1213 I---EPYER--SLVFEICC 1226