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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916275
Clone id YMU001_000085_F02
Library
Length 219
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000085_F02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CTCCTCTGGATGATCTCAGTGATGTAAGAACTCACTAGTCTATCCTCTTCTAGCTGCATC
AAATACTTACATCTTGTGCTTTACTGACAATGCAGGAGACATTTTCTCAGCAGATACTCT
CAAGCTAGGTACCACAAATTCCATAGGTACTATAGCCTCCAACCCATAGACCAACTTGAA
AGGTGTCATCCCTGTGGTGACTTTGAAAGCAGTCTTGAA
■■Homology search results ■■ -
sp_hit_id Q2J833
Definition sp|Q2J833|PYRB_FRASC Aspartate carbamoyltransferase OS=Frankia sp. (strain CcI3)
Align length 31
Score (bit) 30.0
E-value 3.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916275|Adiantum capillus-veneris mRNA, clone:
YMU001_000085_F02.
         (219 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q2J833|PYRB_FRASC Aspartate carbamoyltransferase OS=Frankia s...    30   3.7  
sp|Q0RF77|PYRB_FRAAA Aspartate carbamoyltransferase OS=Frankia a...    30   4.8  

>sp|Q2J833|PYRB_FRASC Aspartate carbamoyltransferase OS=Frankia sp.
           (strain CcI3) GN=pyrB PE=3 SV=1
          Length = 318

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -1

Query: 183 PFKLVYGLEAIVPMEFVVPSLRVSAEKMSPA 91
           P ++ Y L+A++P   VV  LRV  E+MS A
Sbjct: 210 PVEVSYNLDAVLPKSDVVMMLRVQRERMSAA 240


>sp|Q0RF77|PYRB_FRAAA Aspartate carbamoyltransferase OS=Frankia alni
           (strain ACN14a) GN=pyrB PE=3 SV=1
          Length = 318

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -1

Query: 213 TAFKVTTGMTPFKLVYGLEAIVPMEFVVPSLRVSAEKMSPA 91
           T   +     P ++ Y L+A++P   VV  LRV  E+MS A
Sbjct: 200 TLLPIGVSSWPVEVSYDLDAVLPKTDVVMMLRVQRERMSAA 240
tr_hit_id A5C5F1
Definition tr|A5C5F1|A5C5F1_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 42
Score (bit) 50.4
E-value 4.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916275|Adiantum capillus-veneris mRNA, clone:
YMU001_000085_F02.
         (219 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5C5F1|A5C5F1_VITVI Putative uncharacterized protein OS=Vitis...    50   4e-05
tr|A5BYX1|A5BYX1_VITVI Putative uncharacterized protein OS=Vitis...    50   4e-05
tr|A5BQS5|A5BQS5_VITVI Putative uncharacterized protein OS=Vitis...    50   4e-05
tr|A5BPS7|A5BPS7_VITVI Putative uncharacterized protein OS=Vitis...    50   4e-05
tr|A5BIJ0|A5BIJ0_VITVI Putative uncharacterized protein OS=Vitis...    50   4e-05
tr|A5AY22|A5AY22_VITVI Putative uncharacterized protein OS=Vitis...    50   4e-05
tr|A5AWU8|A5AWU8_VITVI Putative uncharacterized protein OS=Vitis...    50   4e-05
tr|A5AFD7|A5AFD7_VITVI Putative uncharacterized protein OS=Vitis...    50   4e-05
tr|A5APF3|A5APF3_VITVI Putative uncharacterized protein OS=Vitis...    50   6e-05
tr|A5AJ74|A5AJ74_VITVI Putative uncharacterized protein OS=Vitis...    50   6e-05
tr|A5C7V3|A5C7V3_VITVI Putative uncharacterized protein OS=Vitis...    50   7e-05
tr|A5C6U7|A5C6U7_VITVI Putative uncharacterized protein OS=Vitis...    50   7e-05
tr|A5C4Y9|A5C4Y9_VITVI Putative uncharacterized protein OS=Vitis...    50   7e-05
tr|A5C451|A5C451_VITVI Putative uncharacterized protein OS=Vitis...    50   7e-05
tr|A5BYG4|A5BYG4_VITVI Putative uncharacterized protein OS=Vitis...    50   7e-05
tr|A5BVK4|A5BVK4_VITVI Putative uncharacterized protein OS=Vitis...    50   7e-05
tr|A5BRI1|A5BRI1_VITVI Putative uncharacterized protein (Fragmen...    50   7e-05
tr|A5BHA9|A5BHA9_VITVI Putative uncharacterized protein OS=Vitis...    50   7e-05
tr|A5BDN9|A5BDN9_VITVI Putative uncharacterized protein OS=Vitis...    50   7e-05
tr|A5BB53|A5BB53_VITVI Putative uncharacterized protein OS=Vitis...    50   7e-05
tr|A5B6Y5|A5B6Y5_VITVI Putative uncharacterized protein OS=Vitis...    50   7e-05
tr|A5B5Q5|A5B5Q5_VITVI Putative uncharacterized protein OS=Vitis...    50   7e-05
tr|A5B120|A5B120_VITVI Putative uncharacterized protein OS=Vitis...    50   7e-05
tr|A5AJJ6|A5AJJ6_VITVI Putative uncharacterized protein OS=Vitis...    50   7e-05
tr|Q2HW89|Q2HW89_MEDTR Integrase, catalytic region; Ribonuclease...    49   1e-04
tr|Q1S5K2|Q1S5K2_MEDTR Probable integrase-common tobacco-related...    49   1e-04
tr|A5CBN8|A5CBN8_VITVI Putative uncharacterized protein OS=Vitis...    49   1e-04
tr|A5BYJ0|A5BYJ0_VITVI Putative uncharacterized protein OS=Vitis...    49   1e-04
tr|A5B3S7|A5B3S7_VITVI Putative uncharacterized protein OS=Vitis...    49   1e-04
tr|A5AZ81|A5AZ81_VITVI Putative uncharacterized protein OS=Vitis...    49   1e-04

>tr|A5C5F1|A5C5F1_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_033315 PE=4 SV=1
          Length = 2351

 Score = 50.4 bits (119), Expect = 4e-05
 Identities = 20/42 (47%), Positives = 33/42 (78%)
 Frame = -1

Query: 219  FKTAFKVTTGMTPFKLVYGLEAIVPMEFVVPSLRVSAEKMSP 94
            ++T+F+ +TG TP+ LVYG+EA++P+E  + SLRV+ E+  P
Sbjct: 1877 YRTSFRTSTGATPYSLVYGMEAVLPVEIEMGSLRVALEQQIP 1918


>tr|A5BYX1|A5BYX1_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_001999 PE=4 SV=1
          Length = 674

 Score = 50.4 bits (119), Expect = 4e-05
 Identities = 20/42 (47%), Positives = 33/42 (78%)
 Frame = -1

Query: 219 FKTAFKVTTGMTPFKLVYGLEAIVPMEFVVPSLRVSAEKMSP 94
           ++T+F+ +TG TP+ LVYG+EA++P+E  + SLRV+ E+  P
Sbjct: 523 YRTSFRTSTGATPYSLVYGMEAVLPVEIEMGSLRVALEQQIP 564


>tr|A5BQS5|A5BQS5_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_027695 PE=4 SV=1
          Length = 2204

 Score = 50.4 bits (119), Expect = 4e-05
 Identities = 20/42 (47%), Positives = 33/42 (78%)
 Frame = -1

Query: 219  FKTAFKVTTGMTPFKLVYGLEAIVPMEFVVPSLRVSAEKMSP 94
            ++T+F+ +TG TP+ LVYG+EA++P+E  + SLRV+ E+  P
Sbjct: 2053 YRTSFRTSTGATPYSLVYGMEAVLPVEIEMGSLRVALEQQIP 2094


>tr|A5BPS7|A5BPS7_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_003207 PE=4 SV=1
          Length = 2072

 Score = 50.4 bits (119), Expect = 4e-05
 Identities = 20/42 (47%), Positives = 33/42 (78%)
 Frame = -1

Query: 219  FKTAFKVTTGMTPFKLVYGLEAIVPMEFVVPSLRVSAEKMSP 94
            ++T+F+ +TG TP+ LVYG+EA++P+E  + SLRV+ E+  P
Sbjct: 1921 YRTSFRTSTGATPYSLVYGMEAVLPVEIEMGSLRVALEQQIP 1962


>tr|A5BIJ0|A5BIJ0_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_009181 PE=4 SV=1
          Length = 2129

 Score = 50.4 bits (119), Expect = 4e-05
 Identities = 20/42 (47%), Positives = 33/42 (78%)
 Frame = -1

Query: 219  FKTAFKVTTGMTPFKLVYGLEAIVPMEFVVPSLRVSAEKMSP 94
            ++T+F+ +TG TP+ LVYG+EA++P+E  + SLRV+ E+  P
Sbjct: 1978 YRTSFRTSTGATPYSLVYGMEAVLPVEIEMGSLRVALEQQIP 2019


>tr|A5AY22|A5AY22_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_019060 PE=4 SV=1
          Length = 2004

 Score = 50.4 bits (119), Expect = 4e-05
 Identities = 20/42 (47%), Positives = 33/42 (78%)
 Frame = -1

Query: 219  FKTAFKVTTGMTPFKLVYGLEAIVPMEFVVPSLRVSAEKMSP 94
            ++T+F+ +TG TP+ LVYG+EA++P+E  + SLRV+ E+  P
Sbjct: 1853 YRTSFRTSTGATPYSLVYGMEAVLPVEIEMGSLRVALEQQIP 1894


>tr|A5AWU8|A5AWU8_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_022661 PE=4 SV=1
          Length = 2394

 Score = 50.4 bits (119), Expect = 4e-05
 Identities = 20/42 (47%), Positives = 33/42 (78%)
 Frame = -1

Query: 219  FKTAFKVTTGMTPFKLVYGLEAIVPMEFVVPSLRVSAEKMSP 94
            ++T+F+ +TG TP+ LVYG+EA++P+E  + SLRV+ E+  P
Sbjct: 1524 YRTSFRTSTGATPYSLVYGMEAVLPVEIEMGSLRVALEQQIP 1565


>tr|A5AFD7|A5AFD7_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_018938 PE=4 SV=1
          Length = 1588

 Score = 50.4 bits (119), Expect = 4e-05
 Identities = 20/42 (47%), Positives = 33/42 (78%)
 Frame = -1

Query: 219  FKTAFKVTTGMTPFKLVYGLEAIVPMEFVVPSLRVSAEKMSP 94
            ++T+F+ +TG TP+ LVYG+EA++P+E  + SLRV+ E+  P
Sbjct: 1437 YRTSFRTSTGATPYSLVYGMEAVLPVEIEMGSLRVALEQQIP 1478


>tr|A5APF3|A5APF3_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_020488 PE=4 SV=1
          Length = 2301

 Score = 50.1 bits (118), Expect = 6e-05
 Identities = 20/42 (47%), Positives = 33/42 (78%)
 Frame = -1

Query: 219  FKTAFKVTTGMTPFKLVYGLEAIVPMEFVVPSLRVSAEKMSP 94
            ++T+F+ +TG TP+ LVYG+EA++P+E  + SLRV+ E+  P
Sbjct: 2150 YRTSFRTSTGATPYSLVYGMEAMLPVEIEMSSLRVALEQQIP 2191


>tr|A5AJ74|A5AJ74_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_018340 PE=4 SV=1
          Length = 2285

 Score = 50.1 bits (118), Expect = 6e-05
 Identities = 20/42 (47%), Positives = 33/42 (78%)
 Frame = -1

Query: 219  FKTAFKVTTGMTPFKLVYGLEAIVPMEFVVPSLRVSAEKMSP 94
            ++T+F+ +TG TP+ LVYG+EA++P+E  + SLRV+ E+  P
Sbjct: 2134 YRTSFRTSTGATPYSLVYGMEAMLPVEIEMGSLRVALERQIP 2175