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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916284
Clone id YMU001_000085_H03
Library
Length 258
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000085_H03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AGTGCACTAAATTTGTTCCTCCCTGAGTCTCCCTTTTCTCCTTCACTCCTGCCTCAAGCC
CTCTTCCAATCAGCTTATGCAGGCTACAGAAGAAGCACAGGTTTTTTGACAAAAGCTTGC
TGAGGGCTTTTCTGGACCAACCCTACAATTTACCGTAAAGTCTATATCTATCTTCTCCAG
CATTGCTTTCCTTGTAGGCCAGTTTGGTACACTCCAAAGAAAGCAGCAATATAATCCCTC
ACAATTTTCTATGTCTAT
■■Homology search results ■■ -
sp_hit_id Q5BJM8
Definition sp|Q5BJM8|ZNT7_RAT Zinc transporter 7 OS=Rattus norvegicus
Align length 42
Score (bit) 34.7
E-value 0.15
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916284|Adiantum capillus-veneris mRNA, clone:
YMU001_000085_H03.
         (258 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5BJM8|ZNT7_RAT Zinc transporter 7 OS=Rattus norvegicus GN=Sl...    35   0.15 
sp|Q9JKN1|ZNT7_MOUSE Zinc transporter 7 OS=Mus musculus GN=Slc30...    35   0.15 
sp|Q8NEW0|ZNT7_HUMAN Zinc transporter 7 OS=Homo sapiens GN=SLC30...    35   0.15 
sp|A4IFD7|ZNT7_BOVIN Zinc transporter 7 OS=Bos taurus GN=SLC30A7...    32   1.3  
sp|Q5MNV6|ZNT7_CHICK Zinc transporter 7 OS=Gallus gallus GN=SLC3...    30   3.7  
sp|A5PMX1|ZNT7_DANRE Zinc transporter 7 OS=Danio rerio GN=slc30a...    29   8.2  

>sp|Q5BJM8|ZNT7_RAT Zinc transporter 7 OS=Rattus norvegicus
           GN=Slc30a7 PE=2 SV=2
          Length = 378

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = -3

Query: 202 LAYKESNAGEDRYRLYGKL*GWSRKALSKLLSKNLCFFCSLH 77
           L+ K+      ++ L+GK+ GW R  LS   S+NL FF  L+
Sbjct: 4   LSIKDDEYKPPKFNLFGKISGWFRSILSDKTSRNLFFFLCLN 45


>sp|Q9JKN1|ZNT7_MOUSE Zinc transporter 7 OS=Mus musculus GN=Slc30a7
           PE=1 SV=1
          Length = 378

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = -3

Query: 202 LAYKESNAGEDRYRLYGKL*GWSRKALSKLLSKNLCFFCSLH 77
           L+ K+      ++ L+GK+ GW R  LS   S+NL FF  L+
Sbjct: 4   LSIKDDEYKPPKFNLFGKISGWFRSILSDKTSRNLFFFLCLN 45


>sp|Q8NEW0|ZNT7_HUMAN Zinc transporter 7 OS=Homo sapiens GN=SLC30A7
           PE=1 SV=1
          Length = 376

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = -3

Query: 202 LAYKESNAGEDRYRLYGKL*GWSRKALSKLLSKNLCFFCSLH 77
           L+ K+      ++ L+GK+ GW R  LS   S+NL FF  L+
Sbjct: 4   LSIKDDEYKPPKFNLFGKISGWFRSILSDKTSRNLFFFLCLN 45


>sp|A4IFD7|ZNT7_BOVIN Zinc transporter 7 OS=Bos taurus GN=SLC30A7
           PE=2 SV=1
          Length = 376

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -3

Query: 202 LAYKESNAGEDRYRLYGKL*GWSRKALSKLLSKNLCFFCSLH 77
           L+ K+      ++ L+ K+ GW R  LS   S+NL FF  L+
Sbjct: 4   LSIKDDEYKPPKFNLFRKISGWFRSILSDKTSRNLFFFLCLN 45


>sp|Q5MNV6|ZNT7_CHICK Zinc transporter 7 OS=Gallus gallus GN=SLC30A7
           PE=2 SV=1
          Length = 378

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -3

Query: 202 LAYKESNAGEDRYRLYGKL*GWSRKALSKLLSKNLCFFCSLH 77
           L+ K+      R  L+ K+ GW R  L+   S+NL FF  L+
Sbjct: 4   LSIKDDEYKPPRLNLFRKMSGWFRSILADKTSRNLFFFLCLN 45


>sp|A5PMX1|ZNT7_DANRE Zinc transporter 7 OS=Danio rerio GN=slc30a7
           PE=2 SV=1
          Length = 387

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -3

Query: 202 LAYKESNAGEDRYRLYGKL*GWSRKALSKLLSKNLCFFCSLH 77
           L+ K+      ++ L  KL GW R  L+   S+NL FF  L+
Sbjct: 4   LSIKDDEYKPAKFNLVVKLSGWFRSILADKTSRNLFFFLCLN 45
tr_hit_id Q5RCP6
Definition tr|Q5RCP6|Q5RCP6_PONAB Putative uncharacterized protein DKFZp469I1737 OS=Pongo abelii
Align length 42
Score (bit) 34.7
E-value 2.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916284|Adiantum capillus-veneris mRNA, clone:
YMU001_000085_H03.
         (258 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q5RCP6|Q5RCP6_PONAB Putative uncharacterized protein DKFZp469...    35   2.5  
tr|B6V6V4|B6V6V4_PIG Solute carrier family 30 member 7 OS=Sus sc...    35   2.5  
tr|B0JMT3|B0JMT3_MICAN Putative uncharacterized protein OS=Micro...    33   7.1  

>tr|Q5RCP6|Q5RCP6_PONAB Putative uncharacterized protein
           DKFZp469I1737 OS=Pongo abelii GN=DKFZp469I1737 PE=2 SV=1
          Length = 185

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = -3

Query: 202 LAYKESNAGEDRYRLYGKL*GWSRKALSKLLSKNLCFFCSLH 77
           L+ K+      ++ L+GK+ GW R  LS   S+NL FF  L+
Sbjct: 4   LSIKDDEYKPPKFNLFGKISGWFRSILSDKTSRNLFFFLCLN 45


>tr|B6V6V4|B6V6V4_PIG Solute carrier family 30 member 7 OS=Sus
           scrofa GN=slc30A7 PE=2 SV=1
          Length = 376

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = -3

Query: 202 LAYKESNAGEDRYRLYGKL*GWSRKALSKLLSKNLCFFCSLH 77
           L+ K+      ++ L+GK+ GW R  LS   S+NL FF  L+
Sbjct: 4   LSIKDDEYKPPKFNLFGKISGWFRSILSDKTSRNLFFFLCLN 45


>tr|B0JMT3|B0JMT3_MICAN Putative uncharacterized protein
           OS=Microcystis aeruginosa (strain NIES-843) GN=MAE_02750
           PE=4 SV=1
          Length = 885

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
 Frame = +2

Query: 11  ICSSLSLPFLLHSCLKPSSNQLMQATEEAQVF*QKLAEGFS--GPTLQFTVKSISIFSSI 184
           IC+S+++PF+L        N+L++AT    VF  K+   F      +  T+    IF+ I
Sbjct: 145 ICASIAIPFILIGYGVEGINELIRATTSQDVFWSKINSVFKLLFTAVGVTLSGAGIFAGI 204

Query: 185 AFLVGQFGTLQRKQQYN 235
             L+  F  L +  + N
Sbjct: 205 KSLLRNFQRLLQNPKNN 221