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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916288
Clone id YMU001_000086_A02
Library
Length 413
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000086_A02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GTGCCATAGCCAGAGCCCGGCTGATCTTGGGCCCTTCTTCCGCCATGGACTAAAGCACCA
GCACCTTGATCCTGAGCTGTCCAACAACTGCTGGAAGAACTTGCTCCTCCACCTCCTTGA
TCTTCTCCCCTCCTCCCACCGTACTCAAAACTTGCTGCAGGCTCAGAAGCCAGCATCCGC
GAAGTCCTTGGATGATGAAAACCTGCATCTGAGCGCCAGTCTTGGTGAGAGTGCACATAT
GTGGGCTCATAACTTGACCTTCTACCACGAGAGTTTGATCTCCAAGATTGATCGCCTCTT
TCTTCCACAAAATCTTTCTGGTGAAAGTAACCCCGCCCGCCCATGCGGGCCCCACGATGC
CCAGGAGAATAATGCTGTTGTTGCTCCTGATGATGCACGGGTAGTTGATGATG
■■Homology search results ■■ -
sp_hit_id Q8NGE3
Definition sp|Q8NGE3|O10P1_HUMAN Olfactory receptor 10P1 OS=Homo sapiens
Align length 86
Score (bit) 32.0
E-value 1.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916288|Adiantum capillus-veneris mRNA, clone:
YMU001_000086_A02.
         (413 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8NGE3|O10P1_HUMAN Olfactory receptor 10P1 OS=Homo sapiens GN...    32   1.00 
sp|A7KAM4|ATG13_PENCH Autophagy-related protein 13 OS=Penicilliu...    32   1.00 
sp|P04219|HYIG_MOUSE Putative uncharacterized Ig-region protein ...    30   2.9  
sp|Q6K5F8|CDKG1_ORYSJ Cyclin-dependent kinase G-1 OS=Oryza sativ...    30   2.9  
sp|A2X6X1|CDKG1_ORYSI Cyclin-dependent kinase G-1 OS=Oryza sativ...    30   2.9  
sp|P10180|CUT_DROME Homeobox protein cut OS=Drosophila melanogas...    30   4.9  
sp|Q9W0K7|BAB1_DROME Protein bric-a-brac 1 OS=Drosophila melanog...    30   4.9  
sp|P23792|DISC_DROME Protein disconnected OS=Drosophila melanoga...    29   6.5  
sp|Q9VRI9|CP6T1_DROME Probable cytochrome P450 6t1 OS=Drosophila...    29   6.5  
sp|Q96QK8|CD034_HUMAN Uncharacterized protein C4orf34 OS=Homo sa...    29   8.4  

>sp|Q8NGE3|O10P1_HUMAN Olfactory receptor 10P1 OS=Homo sapiens
           GN=OR10P1 PE=2 SV=1
          Length = 313

 Score = 32.0 bits (71), Expect = 1.00
 Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
 Frame = -2

Query: 412 IINYPCIIRSNNSIILLGIVGPAWAGGVTFTRKILWKKEAINLGDQTLVVEGQVMSPHMC 233
           ++ Y   +  N+ IILL  V PA    + F  + L   E     D        + SPH  
Sbjct: 32  LLVYLVTLLGNSLIILLTQVSPALHSPMYFFLRQLSVVELFYTTDIVPRTLANLGSPHPQ 91

Query: 232 TLTKTG--AQMQVFIIQGLRGCWLLS 161
            ++  G  AQM VFI+ G+  C LL+
Sbjct: 92  AISFQGCAAQMYVFIVLGISECCLLT 117


>sp|A7KAM4|ATG13_PENCH Autophagy-related protein 13 OS=Penicillium
           chrysogenum GN=atg13 PE=3 SV=1
          Length = 974

 Score = 32.0 bits (71), Expect = 1.00
 Identities = 17/61 (27%), Positives = 29/61 (47%)
 Frame = +2

Query: 173 ASAKSLDDENLHLSASLGESAHMWAHNLTFYHESLISKIDRLFLPQNLSGESNPARPCGP 352
           A  + + D N  LS S+ +S HM  H  +      +S +  +    ++S  S+P +P  P
Sbjct: 616 ARFRGMRDSNAALSDSMSQSMHM--HRSSISSSKQLSGVPPMVAGTSISTASSPGKPMSP 673

Query: 353 H 355
           H
Sbjct: 674 H 674


>sp|P04219|HYIG_MOUSE Putative uncharacterized Ig-region protein
           OS=Mus musculus PE=4 SV=1
          Length = 140

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +3

Query: 39  SAMD*STSTLILSCPTTAGRTCSSTSLIFSPPPTVLKTCC 158
           SA   S S+  L  P++ G+ C     +  P PT+L  CC
Sbjct: 36  SATHGSLSSRTLFFPSSRGQKCGPQQALLCPQPTILGWCC 75


>sp|Q6K5F8|CDKG1_ORYSJ Cyclin-dependent kinase G-1 OS=Oryza sativa
           subsp. japonica GN=CDKG-1 PE=2 SV=1
          Length = 693

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -1

Query: 413 HHQLPVHHQEQQQHYSPGHRGARMGGRGYFHQKD 312
           HH+ P  H++ ++    G  G R    GY H++D
Sbjct: 33  HHRHPSRHRDSERRRDGGRSGGRELSNGYSHRRD 66


>sp|A2X6X1|CDKG1_ORYSI Cyclin-dependent kinase G-1 OS=Oryza sativa
           subsp. indica GN=CDKG-1 PE=2 SV=1
          Length = 693

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -1

Query: 413 HHQLPVHHQEQQQHYSPGHRGARMGGRGYFHQKD 312
           HH+ P  H++ ++    G  G R    GY H++D
Sbjct: 33  HHRHPSRHRDSERRRDGGRSGGRELSNGYSHRRD 66


>sp|P10180|CUT_DROME Homeobox protein cut OS=Drosophila melanogaster
           GN=ct PE=1 SV=1
          Length = 2175

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -1

Query: 413 HHQLPVHHQEQQQHYSPGHRGARMGGRGYFH 321
           HHQ   HHQ+Q QH    H+   +  + + H
Sbjct: 665 HHQQQQHHQQQHQHQQQHHQQQHLHQQHHHH 695


>sp|Q9W0K7|BAB1_DROME Protein bric-a-brac 1 OS=Drosophila
           melanogaster GN=bab1 PE=1 SV=2
          Length = 977

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -1

Query: 413 HHQLPVHHQEQQQHYSPGHRGARMGGRG 330
           HH      Q+QQQH+  GH+ A   G G
Sbjct: 834 HHHQQQQQQQQQQHHQGGHQVAHKSGFG 861


>sp|P23792|DISC_DROME Protein disconnected OS=Drosophila
           melanogaster GN=disco PE=1 SV=2
          Length = 568

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = -1

Query: 413 HHQLPVHHQEQQQHYSPGHRGARMGGRGYFHQKDFVEERGDQ 288
           HH L + H  Q+QH+  GH    MG   + H +   ++   Q
Sbjct: 518 HHHLTLSHHHQEQHHHLGHH--HMGHHHHHHHQHHQQQPQQQ 557


>sp|Q9VRI9|CP6T1_DROME Probable cytochrome P450 6t1 OS=Drosophila
           melanogaster GN=Cyp6t1 PE=2 SV=1
          Length = 529

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 4/44 (9%)
 Frame = +3

Query: 72  LSCPTTAG----RTCSSTSLIFSPPPTVLKTCCRLRSQHPRSPW 191
           LSC T  G    R      L   PP   L  CC  R+ +  SPW
Sbjct: 367 LSCDTVTGLVYLRQVVDEVLRLYPPTAFLDRCCNSRTGYDLSPW 410


>sp|Q96QK8|CD034_HUMAN Uncharacterized protein C4orf34 OS=Homo
           sapiens GN=C4orf34 PE=1 SV=1
          Length = 99

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 275 LISKIDRLFLPQNLSGESNPARPCGPHDAQE 367
           +I+ I  L  P NL G S P +P  PH+ Q+
Sbjct: 62  VIALILFLLRPPNLRGSSLPGKPTSPHNGQD 92
tr_hit_id A7PND2
Definition tr|A7PND2|A7PND2_VITVI Chromosome chr1 scaffold_22, whole genome shotgun sequence OS=Vitis vinifera
Align length 59
Score (bit) 36.6
E-value 0.64
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916288|Adiantum capillus-veneris mRNA, clone:
YMU001_000086_A02.
         (413 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7PND2|A7PND2_VITVI Chromosome chr1 scaffold_22, whole genome...    37   0.64 
tr|Q9C9B9|Q9C9B9_ARATH Putative uncharacterized protein F2P9.15 ...    36   0.84 
tr|A7WPK7|A7WPK7_TOBAC Putative uncharacterized protein C365 OS=...    36   0.84 
tr|Q9C664|Q9C664_ARATH Putative uncharacterized protein F28B23.1...    36   1.1  
tr|B4H1S7|B4H1S7_DROPE GL17909 OS=Drosophila persimilis GN=GL179...    35   1.4  
tr|Q8U1H5|Q8U1H5_PYRFU Putative chitinase OS=Pyrococcus furiosus...    35   1.9  
tr|B5DRC4|B5DRC4_DROPS GA28534 OS=Drosophila pseudoobscura pseud...    35   2.4  
tr|A7PGI4|A7PGI4_VITVI Chromosome chr17 scaffold_16, whole genom...    34   3.2  
tr|Q9UWR7|Q9UWR7_PYRKO Chitinase (Chitinase, containing dual cat...    34   4.2  
tr|Q8S3R9|Q8S3R9_ORYSJ Putative uridine kinase (Putative unchara...    33   5.4  
tr|Q6YV21|Q6YV21_ORYSJ Os02g0708200 protein OS=Oryza sativa subs...    33   5.4  
tr|B8AHA3|B8AHA3_ORYSI Putative uncharacterized protein OS=Oryza...    33   5.4  
tr|Q1MNU4|Q1MNU4_LAWIP Putative uncharacterized protein LIC037 O...    33   9.3  
tr|B3NJE3|B3NJE3_DROER GG14628 OS=Drosophila erecta GN=GG14628 P...    33   9.3  
tr|Q5US56|Q5US56_9LECA DNA-directed RNA polymerase (Fragment) OS...    33   9.3  
tr|B8MCL3|B8MCL3_9EURO AflR-like C6 transcription factor, putati...    33   9.3  

>tr|A7PND2|A7PND2_VITVI Chromosome chr1 scaffold_22, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00021201001
           PE=4 SV=1
          Length = 663

 Score = 36.6 bits (83), Expect = 0.64
 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
 Frame = -2

Query: 394 IIRSNNSIILLGIVGPAWAGGVTFTRKILWKKEAI------NLGDQTLVVEGQVMSPHM 236
           + ++N+ IIL+G+ GP+ AG   FT KIL    +I      N  D + +V+G    P +
Sbjct: 58  LAQNNDGIILVGLAGPSGAGKTVFTEKILNFMPSIAVISMDNYNDASRIVDGNFDDPRL 116


>tr|Q9C9B9|Q9C9B9_ARATH Putative uncharacterized protein F2P9.15
           (At1g73980/F2P9_15) OS=Arabidopsis thaliana GN=At1g73980
           PE=2 SV=1
          Length = 643

 Score = 36.2 bits (82), Expect = 0.84
 Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
 Frame = -2

Query: 394 IIRSNNSIILLGIVGPAWAGGVTFTRKILWKKEAI------NLGDQTLVVEGQVMSPHM 236
           + + N+ +IL+G+ GP+ AG   FT KIL    +I      N  D T V++G    P +
Sbjct: 58  LAQKNDGLILVGLAGPSGAGKTIFTEKILNFMPSIAIINMDNYNDGTRVIDGNFDDPRL 116


>tr|A7WPK7|A7WPK7_TOBAC Putative uncharacterized protein C365
           OS=Nicotiana tabacum GN=C365 PE=2 SV=1
          Length = 661

 Score = 36.2 bits (82), Expect = 0.84
 Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
 Frame = -2

Query: 394 IIRSNNSIILLGIVGPAWAGGVTFTRKILWKKEAI------NLGDQTLVVEGQVMSPHM 236
           +++ N  +I++G+ GP+ AG   FT KIL    ++      N  D + +V+G    P +
Sbjct: 58  LVQKNEGLIIVGVAGPSGAGKTVFTEKILSFMPSVAVISMDNYNDASRIVDGNFDDPRL 116


>tr|Q9C664|Q9C664_ARATH Putative uncharacterized protein F28B23.13
           (Putative uncharacterized protein At1g26190)
           OS=Arabidopsis thaliana GN=At1g26190 PE=2 SV=1
          Length = 674

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
 Frame = -2

Query: 388 RSNNSIILLGIVGPAWAGGVTFTRKILWKKEAI------NLGDQTLVVEGQVMSPHM 236
           + N+ IIL+G+ GP+ AG   FT KIL    ++      N  D + +V+G    P +
Sbjct: 60  QKNDGIILVGVAGPSGAGKTVFTEKILNFLPSVAVISMDNYNDSSRIVDGNFDDPRL 116


>tr|B4H1S7|B4H1S7_DROPE GL17909 OS=Drosophila persimilis GN=GL17909
           PE=4 SV=1
          Length = 617

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
 Frame = -1

Query: 413 HHQLPVHH----QEQQQHYSPGHRGARMGGR 333
           H+QLP+HH    Q Q QH SP H   R  GR
Sbjct: 169 HNQLPLHHQSQSQSQHQHQSPHHHAPRTNGR 199


>tr|Q8U1H5|Q8U1H5_PYRFU Putative chitinase OS=Pyrococcus furiosus
           GN=PF1233 PE=1 SV=1
          Length = 717

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 14/55 (25%), Positives = 28/55 (50%)
 Frame = -2

Query: 352 GPAWAGGVTFTRKILWKKEAINLGDQTLVVEGQVMSPHMCTLTKTGAQMQVFIIQ 188
           GPAWAG +   + +   +E   +G + ++  G  + P++C    T  Q+  + I+
Sbjct: 457 GPAWAGSIPLEKFVDEVRELREIGGEVIIAFGGAVGPYLCQQASTPEQLAEWYIK 511


>tr|B5DRC4|B5DRC4_DROPS GA28534 OS=Drosophila pseudoobscura
           pseudoobscura GN=GA28534 PE=4 SV=1
          Length = 113

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 6/33 (18%)
 Frame = -1

Query: 413 HHQLPVHHQEQQQ------HYSPGHRGARMGGR 333
           H+QLP+HHQ Q Q      H SP H   R  GR
Sbjct: 19  HNQLPLHHQSQSQSQSQHQHQSPHHHAPRTNGR 51


>tr|A7PGI4|A7PGI4_VITVI Chromosome chr17 scaffold_16, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00017571001
           PE=4 SV=1
          Length = 661

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
 Frame = -2

Query: 394 IIRSNNSIILLGIVGPAWAGGVTFTRKILWKKEAI------NLGDQTLVVEGQVMSPHM 236
           + ++N+ IIL+G+ GP+ AG    T K+L    +I      N  D + +++G    P +
Sbjct: 59  LAQNNDGIILVGVAGPSGAGKTVLTEKVLNFMPSIAVISMDNYNDSSRIIDGNFDDPRL 117


>tr|Q9UWR7|Q9UWR7_PYRKO Chitinase (Chitinase, containing dual
            catalytic domains) OS=Pyrococcus kodakaraensis GN=Pk-chiA
            PE=4 SV=1
          Length = 1215

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 16/55 (29%), Positives = 25/55 (45%)
 Frame = -2

Query: 352  GPAWAGGVTFTRKILWKKEAINLGDQTLVVEGQVMSPHMCTLTKTGAQMQVFIIQ 188
            GPAWAG +     +   K     G   ++  G  + P++C   KT  Q+  + IQ
Sbjct: 955  GPAWAGSIPLDAFVDEVKGLREAGGDVIIAFGGAVGPYLCQQAKTPEQLAQWYIQ 1009


>tr|Q8S3R9|Q8S3R9_ORYSJ Putative uridine kinase (Putative
           uncharacterized protein) OS=Oryza sativa subsp. japonica
           GN=49D11.13 PE=4 SV=1
          Length = 646

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
 Frame = -2

Query: 394 IIRSNNSIILLGIVGPAWAGGVTFTRKILWKKEAI------NLGDQTLVVEGQVMSPHM 236
           +++ N  +I +G+ GP+ AG   FT K+L     +      N  D + +V+G    P +
Sbjct: 52  LVQHNEGMIFVGVAGPSGAGKTVFTEKVLNFMPGVAVISMDNYNDASRIVDGNFDDPRL 110