BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916300|Adiantum capillus-veneris mRNA, clone:
YMU001_000086_B04.
         (517 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q05FH9|RPOC_CARRP DNA-directed RNA polymerase subunit beta' O...    31   4.0  
sp|Q9YBU4|Y1505_AERPE UPF0273 protein APE_1505.1 OS=Aeropyrum pe...    30   5.2  
sp|Q49Z00|REX_STAS1 Redox-sensing transcriptional repressor rex ...    30   6.7  
sp|Q6GF50|LUKL1_STAAR Uncharacterized leukocidin-like protein 1 ...    30   8.7  
sp|O58022|Y284_PYRHO UPF0273 protein PH0284 OS=Pyrococcus horiko...    30   8.8  

>sp|Q05FH9|RPOC_CARRP DNA-directed RNA polymerase subunit beta'
           OS=Carsonella ruddii (strain PV) GN=rpoC PE=3 SV=1
          Length = 1292

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -1

Query: 475 FVNFNGLVIKKYGYFCLTIFF*GN*NRYQKVCFCHS 368
           F+NF  L  +  G FCL IF        +K CFCH+
Sbjct: 32  FINFKNLKPEPNGLFCLKIFSDFELCCLKKKCFCHN 67


>sp|Q9YBU4|Y1505_AERPE UPF0273 protein APE_1505.1 OS=Aeropyrum
           pernix GN=APE_1505.1 PE=3 SV=2
          Length = 248

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 15/52 (28%), Positives = 28/52 (53%)
 Frame = +1

Query: 94  LALTNHKLQIRLDIE*FLWDSRGYNAKPRFVMFVVFITSSLSPRFHLKRFII 249
           +AL  H +Q+R+++  F WD R Y  +  F +   F TS +      +R+++
Sbjct: 57  VALEEHPVQVRINMAQFGWDVREYERQGLFAVVDAF-TSGIGEAAKKERYVV 107


>sp|Q49Z00|REX_STAS1 Redox-sensing transcriptional repressor rex
           OS=Staphylococcus saprophyticus subsp. saprophyticus
           (strain ATCC 15305 / DSM 20229) GN=rex PE=3 SV=1
          Length = 213

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -3

Query: 293 FGRLDPKGAMEHVKRIMNLFKWNLGDNDEV-INTTNMTNLGLAL 165
           FG L  KG   ++  +++ FK  + +NDE+ I    + NLG AL
Sbjct: 57  FGELGKKGYGYNIDSLLHFFKNEISENDEIKIAIVGVGNLGKAL 100


>sp|Q6GF50|LUKL1_STAAR Uncharacterized leukocidin-like protein 1
           OS=Staphylococcus aureus (strain MRSA252) GN=SAR2107
           PE=3 SV=1
          Length = 339

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +3

Query: 327 FIEHDYRKFDDRSTEWQKHTFW 392
           FI H  R  DD   +W KH FW
Sbjct: 277 FIVHYKRSMDDFKLDWNKHGFW 298


>sp|O58022|Y284_PYRHO UPF0273 protein PH0284 OS=Pyrococcus
           horikoshii GN=PH0284 PE=1 SV=2
          Length = 247

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 15/52 (28%), Positives = 27/52 (51%)
 Frame = +1

Query: 94  LALTNHKLQIRLDIE*FLWDSRGYNAKPRFVMFVVFITSSLSPRFHLKRFII 249
           +AL  H +Q+R ++  F WD + Y  K  F M   F T+ +      +++I+
Sbjct: 57  VALEEHPVQVRQNMAQFGWDVKPYEEKGMFAMVDAF-TAGIGKSKEYEKYIV 107

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916300|Adiantum capillus-veneris mRNA, clone:
YMU001_000086_B04.
         (517 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q5CG57|Q5CG57_CRYHO Putative uncharacterized protein OS=Crypt...    35   2.9  

>tr|Q5CG57|Q5CG57_CRYHO Putative uncharacterized protein
           OS=Cryptosporidium hominis GN=Chro.10243 PE=4 SV=1
          Length = 934

 Score = 34.7 bits (78), Expect = 2.9
 Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
 Frame = -3

Query: 368 SGPIIKFSIVMLNKKKHYIHVFLVPFGRLDPKGA-----MEHVKRIMNLFKWNLGDNDEV 204
           SG  I+    +L+  KH I + L+    LDP         EH++ I +    N  D +E+
Sbjct: 730 SGVCIRSFKELLDVIKHVIQLILIVAPTLDPGNEDYQPYQEHLEVINSQLTTNQSDRNEL 789

Query: 203 INTTNMTNLGLAL*PLESHRNYSISSR 123
           I  T   N GLA      +  +S+SSR
Sbjct: 790 IKNTEFLNSGLA-----QNNIFSLSSR 811