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NBDC - LSDB Archive
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BP916301
Clone id YMU001_000086_B05
Library
Length 433
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000086_B05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CTCGGGAATGGAGCTGTCCCCACAGACATTCTGTGCACATCAAGCGACCACAAAGTTGAA
CTCTTACTCAAAGACTCTGGAAACACCCCTCGTCTTCTACCCTCTACCAAAACTCTGGTG
GCACGAGATCTCTGCCCCGCCCACCATAATGCATCCAGAAGTGAGTTGAAAAACATTGTA
TAGTCTTCAATGCCATTGACTGTGATCGAATCAAAAGCAGGCTGGACAATCCCACTCCAA
TTACTGGCTTTATCAAAGTTCCCATTAATCAAACCAGCAACAAGTACATGCAAGTAGGGC
ATGCCATTGCCTTGCATCTCATCCAAAAGCCCGTGAGCATCATCCCACCTGCTGCGCCTC
GCCGATATTGACAACATCAAAATGTAAGATGTCACTTGCGGCACTGAACAAAGTTCTTTG
ATCTCCAAGAATT
■■Homology search results ■■ -
sp_hit_id Q9S7Q2
Definition sp|Q9S7Q2|PP124_ARATH Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidopsis thaliana
Align length 138
Score (bit) 123.0
E-value 3.0e-28
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916301|Adiantum capillus-veneris mRNA, clone:
YMU001_000086_B05.
         (433 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9S7Q2|PP124_ARATH Pentatricopeptide repeat-containing protei...   123   3e-28
sp|Q9SIC9|PP178_ARATH Pentatricopeptide repeat-containing protei...    53   6e-07
sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containi...    43   5e-04
sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protei...    41   0.002
sp|O64624|PP163_ARATH Pentatricopeptide repeat-containing protei...    41   0.002
sp|Q9LR67|PPR9_ARATH Pentatricopeptide repeat-containing protein...    40   0.003
sp|Q8S8P6|PP180_ARATH Pentatricopeptide repeat-containing protei...    40   0.003
sp|Q9ZUE9|PP149_ARATH Pentatricopeptide repeat-containing protei...    39   0.007
sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protei...    39   0.009
sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protei...    39   0.012
sp|Q66GP4|PP379_ARATH Pentatricopeptide repeat-containing protei...    38   0.020
sp|Q9ZU27|PPR76_ARATH Pentatricopeptide repeat-containing protei...    37   0.026
sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containi...    37   0.026
sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protei...    37   0.034
sp|Q9LS25|PP420_ARATH Pentatricopeptide repeat-containing protei...    37   0.045
sp|Q8GYP6|PPR49_ARATH Pentatricopeptide repeat-containing protei...    36   0.058
sp|Q8VZE4|PP299_ARATH Pentatricopeptide repeat-containing protei...    36   0.058
sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protei...    36   0.076
sp|P0C7Q9|PPR56_ARATH Pentatricopeptide repeat-containing protei...    35   0.100
sp|Q9FVX2|PP129_ARATH Pentatricopeptide repeat-containing protei...    35   0.100
sp|Q9LN22|PPR54_ARATH Pentatricopeptide repeat-containing protei...    35   0.13 
sp|Q9FJW6|PP451_ARATH Pentatricopeptide repeat-containing protei...    35   0.13 
sp|O04647|PP399_ARATH Pentatricopeptide repeat-containing protei...    35   0.13 
sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protei...    35   0.17 
sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containi...    35   0.17 
sp|Q9FLD8|PP408_ARATH Pentatricopeptide repeat-containing protei...    35   0.17 
sp|Q9M1D8|PP288_ARATH Pentatricopeptide repeat-containing protei...    35   0.17 
sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protei...    35   0.17 
sp|Q9FNL2|PP418_ARATH Pentatricopeptide repeat-containing protei...    34   0.22 
sp|Q8L844|PP413_ARATH Pentatricopeptide repeat-containing protei...    34   0.22 

>sp|Q9S7Q2|PP124_ARATH Pentatricopeptide repeat-containing protein
           At1g74850, chloroplastic OS=Arabidopsis thaliana
           GN=PTAC2 PE=2 SV=1
          Length = 862

 Score =  123 bits (309), Expect = 3e-28
 Identities = 59/138 (42%), Positives = 85/138 (61%)
 Frame = -3

Query: 431 FLEIKELCSVPQVTSYILMLSISARRSRWDDAHGLLDEMQGNGMPYLHVLVAGLINGNFD 252
           F E+K    +P +  Y +ML++  +  RWDD + LL+EM  N +  +H ++  +I G++D
Sbjct: 585 FEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYD 644

Query: 251 KASNWSGIVQPAFDSITVNGIEDYTMFFNSLLDALWWAGQRSRATRVLVEGRRRGVFPES 72
             SNW  IV+   D +   G      F+N+LLDALWW GQ+ RA RVL E  +RG+FPE 
Sbjct: 645 DDSNWQ-IVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLFPEL 703

Query: 71  LSKSSTLWSLDVHRMSVG 18
             K+  +WS+DVHRMS G
Sbjct: 704 FRKNKLVWSVDVHRMSEG 721



 Score = 30.8 bits (68), Expect = 2.5
 Identities = 25/107 (23%), Positives = 45/107 (42%)
 Frame = -3

Query: 395 VTSYILMLSISARRSRWDDAHGLLDEMQGNGMPYLHVLVAGLINGNFDKASNWSGIVQPA 216
           V SY  +++   R  R++ +  LLD M+   +    +    +IN       +W G++   
Sbjct: 176 VFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLL-GL 234

Query: 215 FDSITVNGIEDYTMFFNSLLDALWWAGQRSRATRVLVEGRRRGVFPE 75
           F  +   GI+   + +N+LL A    G    A  V       G+ P+
Sbjct: 235 FAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPD 281


>sp|Q9SIC9|PP178_ARATH Pentatricopeptide repeat-containing protein
            At2g31400, chloroplastic OS=Arabidopsis thaliana
            GN=At2g31400 PE=2 SV=1
          Length = 918

 Score = 52.8 bits (125), Expect = 6e-07
 Identities = 43/140 (30%), Positives = 70/140 (50%)
 Frame = -3

Query: 431  FLEIKELCSVPQVTSYILMLSISARRSRWDDAHGLLDEMQGNGMPYLHVLVAGLINGNFD 252
            F ++ +L   P V ++  +L+  +R + ++DA  LL+E++      ++ +V GL+ G  +
Sbjct: 663  FRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNK-VYGVVHGLLMGQRE 721

Query: 251  KASNWSGIVQPAFDSITVNGIEDYTMFFNSLLDALWWAGQRSRATRVLVEGRRRGVFPES 72
                W    Q  FD +        + F+N+L D LW  GQ+  A  V +EGR R V+   
Sbjct: 722  NV--WLQ-AQSLFDKVNEMDGSTASAFYNALTDMLWHFGQKRGAELVALEGRSRQVWENV 778

Query: 71   LSKSSTLWSLDVHRMSVGTA 12
             S S     LD+H MS G A
Sbjct: 779  WSDS----CLDLHLMSSGAA 794



 Score = 35.8 bits (81), Expect = 0.076
 Identities = 30/128 (23%), Positives = 53/128 (41%), Gaps = 1/128 (0%)
 Frame = -3

Query: 431 FLEIKELCSVPQVTSYILMLSISARRS-RWDDAHGLLDEMQGNGMPYLHVLVAGLINGNF 255
           F  +KE    P + +Y  ++    +    +       DEMQ NG+    +    L+    
Sbjct: 291 FNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLL-AVC 349

Query: 254 DKASNWSGIVQPAFDSITVNGIEDYTMFFNSLLDALWWAGQRSRATRVLVEGRRRGVFPE 75
            +   W    +  FD +T   IE     +N+LLDA+   GQ   A  +L +   + + P 
Sbjct: 350 SRGGLWEA-ARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPN 408

Query: 74  SLSKSSTL 51
            +S S+ +
Sbjct: 409 VVSYSTVI 416



 Score = 29.6 bits (65), Expect = 5.5
 Identities = 32/138 (23%), Positives = 60/138 (43%), Gaps = 3/138 (2%)
 Frame = -3

Query: 431 FLEIKELCSVPQVTSYILMLSISARRSRWDDAHGLLDEMQGNGMPYLHVLVAGLINGNFD 252
           F E+K    +P + +Y  ++   ++   + +A  +  E +  G+    VL + LI+    
Sbjct: 502 FTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALID---- 557

Query: 251 KASNWSGIVQPA---FDSITVNGIEDYTMFFNSLLDALWWAGQRSRATRVLVEGRRRGVF 81
            A   +G+V  A    D +T  GI    + +NS++DA   +    R+     +    G  
Sbjct: 558 -ALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRS----ADYSNGGSL 612

Query: 80  PESLSKSSTLWSLDVHRM 27
           P S S  S L   + +R+
Sbjct: 613 PFSSSALSALTETEGNRV 630


>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing
           protein At1g09680 OS=Arabidopsis thaliana GN=At1g09680
           PE=3 SV=1
          Length = 607

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 25/117 (21%), Positives = 59/117 (50%)
 Frame = -3

Query: 401 PQVTSYILMLSISARRSRWDDAHGLLDEMQGNGMPYLHVLVAGLINGNFDKASNWSGIVQ 222
           P V +Y  +++   + ++ D AHGL DEM   G+    V+   LI+G+    +    +++
Sbjct: 308 PDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGH--SRNGEIDLMK 365

Query: 221 PAFDSITVNGIEDYTMFFNSLLDALWWAGQRSRATRVLVEGRRRGVFPESLSKSSTL 51
            ++  +   G++   + +N+L++     G    A  ++    RRG+ P+ ++ ++ +
Sbjct: 366 ESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLI 422



 Score = 29.6 bits (65), Expect = 5.5
 Identities = 24/97 (24%), Positives = 42/97 (43%)
 Frame = -3

Query: 332 GLLDEMQGNGMPYLHVLVAGLINGNFDKASNWSGIVQPAFDSITVNGIEDYTMFFNSLLD 153
           G   E+   G P L+V V  ++   F K  N S   Q  FD IT   ++   + FN+L++
Sbjct: 226 GFYMEILDAGFP-LNVYVFNILMNKFCKEGNISD-AQKVFDEITKRSLQPTVVSFNTLIN 283

Query: 152 ALWWAGQRSRATRVLVEGRRRGVFPESLSKSSTLWSL 42
                G      R+  +  +    P+  + S+ + +L
Sbjct: 284 GYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINAL 320


>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein
           At1g09820 OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
          Length = 606

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 5/127 (3%)
 Frame = -3

Query: 431 FLEIKELCSVPQVTSYILMLSISARRSRWDDAHGLLDEMQGNG----MPYLHVLVAGLI- 267
           F  +K   +VP    Y +++    +  + DD   L +EM+  G    +   + L+AGL  
Sbjct: 389 FGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCR 448

Query: 266 NGNFDKASNWSGIVQPAFDSITVNGIEDYTMFFNSLLDALWWAGQRSRATRVLVEGRRRG 87
           NGN + A       +  FD +T  G+ D  + F+ L++     G+  +A  +L E  + G
Sbjct: 449 NGNIEAA-------KKLFDQLTSKGLPD-LVTFHILMEGYCRKGESRKAAMLLKEMSKMG 500

Query: 86  VFPESLS 66
           + P  L+
Sbjct: 501 LKPRHLT 507


>sp|O64624|PP163_ARATH Pentatricopeptide repeat-containing protein
           At2g18940 OS=Arabidopsis thaliana GN=At2g18940 PE=2 SV=1
          Length = 822

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 29/131 (22%), Positives = 59/131 (45%), Gaps = 4/131 (3%)
 Frame = -3

Query: 431 FLEIKELCSVPQVTSYILMLSISARRSRWDDAHGLLDEMQGNGMPYLHV----LVAGLIN 264
           F E+K     P   +Y  +L +  +   + +A  +L EM+ N  P   V    LVA  + 
Sbjct: 304 FAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVR 363

Query: 263 GNFDKASNWSGIVQPAFDSITVNGIEDYTMFFNSLLDALWWAGQRSRATRVLVEGRRRGV 84
             F K +  +G++    + +T  G+    + + +++DA   AG+   A ++    +  G 
Sbjct: 364 AGFSKEA--AGVI----EMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGC 417

Query: 83  FPESLSKSSTL 51
            P + + ++ L
Sbjct: 418 VPNTCTYNAVL 428



 Score = 34.7 bits (78), Expect = 0.17
 Identities = 23/108 (21%), Positives = 49/108 (45%)
 Frame = -3

Query: 401 PQVTSYILMLSISARRSRWDDAHGLLDEMQGNGMPYLHVLVAGLINGNFDKASNWSGIVQ 222
           P +  +  MLSI  R + +D A G+L+ ++ +G+    V    L++    +   W    +
Sbjct: 629 PDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWK--AE 686

Query: 221 PAFDSITVNGIEDYTMFFNSLLDALWWAGQRSRATRVLVEGRRRGVFP 78
               ++  + ++   + +N+++      G    A R+L E   RG+ P
Sbjct: 687 EILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRP 734


>sp|Q9LR67|PPR9_ARATH Pentatricopeptide repeat-containing protein
           At1g03560, mitochondrial OS=Arabidopsis thaliana
           GN=At1g03560 PE=2 SV=1
          Length = 660

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 5/131 (3%)
 Frame = -3

Query: 407 SVPQVTSYILMLSISARRSRWDDA----HGLLDEMQGNGMPYLHVLVAGLI-NGNFDKAS 243
           S P V  Y +++   A+    +DA    H ++DE     +    V+V GL  NG  ++A 
Sbjct: 358 SKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEAL 417

Query: 242 NWSGIVQPAFDSITVNGIEDYTMFFNSLLDALWWAGQRSRATRVLVEGRRRGVFPESLSK 63
           ++    +  FD + +N     +MF++SL+D L  AG+   A R+  E   +G   +S   
Sbjct: 418 DYFHTCR--FDGLAIN-----SMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCY 470

Query: 62  SSTLWSLDVHR 30
           ++ + +   HR
Sbjct: 471 NALIDAFTKHR 481


>sp|Q8S8P6|PP180_ARATH Pentatricopeptide repeat-containing protein
           At2g32630 OS=Arabidopsis thaliana GN=At2g32630 PE=2 SV=1
          Length = 624

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 25/102 (24%), Positives = 49/102 (48%)
 Frame = -3

Query: 389 SYILMLSISARRSRWDDAHGLLDEMQGNGMPYLHVLVAGLINGNFDKASNWSGIVQPAFD 210
           +Y L++ +S +  +  DA  L DEM+  G+     +   LI+ N  K +     +   FD
Sbjct: 296 TYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFL--LFD 353

Query: 209 SITVNGIEDYTMFFNSLLDALWWAGQRSRATRVLVEGRRRGV 84
            +T  G+   +  + +L+D +   G+   A  ++ E + +GV
Sbjct: 354 ELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGV 395



 Score = 29.3 bits (64), Expect = 7.1
 Identities = 23/105 (21%), Positives = 46/105 (43%)
 Frame = -3

Query: 359 RRSRWDDAHGLLDEMQGNGMPYLHVLVAGLINGNFDKASNWSGIVQPAFDSITVNGIEDY 180
           R+   D+A  + D M+  G     V     I   F++   +    Q  F  +   G++  
Sbjct: 411 RKGMVDEASMIYDVMEQKGFQ-ADVFTCNTIASCFNRLKRYDEAKQWLFRMME-GGVKLS 468

Query: 179 TMFFNSLLDALWWAGQRSRATRVLVEGRRRGVFPESLSKSSTLWS 45
           T+ + +L+D     G    A R+ VE   +GV P +++ +  +++
Sbjct: 469 TVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYA 513



 Score = 28.9 bits (63), Expect = 9.3
 Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 5/115 (4%)
 Frame = -3

Query: 401 PQVTSYILMLSISARRSRWDDAHGLLDEMQGNGMPYLHVLVAGLI-----NGNFDKASNW 237
           P+  +Y  +++   ++  +    G+L  M+ +G+ Y  V    L+     NG    A   
Sbjct: 257 PEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDA--- 313

Query: 236 SGIVQPAFDSITVNGIEDYTMFFNSLLDALWWAGQRSRATRVLVEGRRRGVFPES 72
               +  FD +   GIE     + SL+      G   RA  +  E   +G+ P S
Sbjct: 314 ----EKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSS 364


>sp|Q9ZUE9|PP149_ARATH Pentatricopeptide repeat-containing protein
           At2g06000 OS=Arabidopsis thaliana GN=At2g06000 PE=2 SV=1
          Length = 536

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
 Frame = -3

Query: 431 FLEIKE--LCSVPQVTSYILMLSISARRSRWDDAHGLLDEMQGNGMPYLHVLVAGLINGN 258
           F ++K   +CS P V +Y  M+S   +  +  +A  LLD+M   G+   +V    L++G 
Sbjct: 264 FKDVKSGSVCS-PDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDG- 321

Query: 257 FDKASNWSGIVQPAFDSITVNGIEDYTMFFNSLLDALWWAGQRSRATRVLVEGRRRGVFP 78
           + KA       +     I+     D  + F SL+D     GQ S+  R+  E   RG+FP
Sbjct: 322 YAKAGEMLTAEEIRGKMISFGCFPD-VVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFP 380

Query: 77  ESLSKS 60
            + + S
Sbjct: 381 NAFTYS 386


>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial OS=Arabidopsis thaliana
           GN=At5g12100 PE=2 SV=1
          Length = 816

 Score = 38.9 bits (89), Expect = 0.009
 Identities = 32/128 (25%), Positives = 65/128 (50%), Gaps = 3/128 (2%)
 Frame = -3

Query: 425 EIKELCSVPQVTSYILMLSISARRSRWDDAHGLLDEMQGNGMPYLHVLVAGLINGNFDKA 246
           E+++  ++P V SY  +++   + S+  +A  +  +M+  G+     +   LI+G   K 
Sbjct: 484 EMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSK- 542

Query: 245 SNWSGIVQPAF---DSITVNGIEDYTMFFNSLLDALWWAGQRSRATRVLVEGRRRGVFPE 75
               G ++ AF     +   GIE   + +N+L+D L   G+ S A  +L+E  R+G+ P+
Sbjct: 543 ----GKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPD 598

Query: 74  SLSKSSTL 51
             + +S +
Sbjct: 599 VFTYNSLI 606


>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial OS=Arabidopsis thaliana
           GN=At5g61990 PE=2 SV=1
          Length = 974

 Score = 38.5 bits (88), Expect = 0.012
 Identities = 27/108 (25%), Positives = 50/108 (46%)
 Frame = -3

Query: 389 SYILMLSISARRSRWDDAHGLLDEMQGNGMPYLHVLVAGLINGNFDKASNWSGIVQPAFD 210
           +Y ++++   +  + DDA  +  EM+G G+         LING F K  N        FD
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLING-FSKLGNMQK-ASSIFD 651

Query: 209 SITVNGIEDYTMFFNSLLDALWWAGQRSRATRVLVEGRRRGVFPESLS 66
            +   G+    + +N LL     +G+  +A  +L E   +G+ P +++
Sbjct: 652 EMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVT 699



 Score = 31.2 bits (69), Expect = 1.9
 Identities = 24/100 (24%), Positives = 45/100 (45%)
 Frame = -3

Query: 401  PQVTSYILMLSISARRSRWDDAHGLLDEMQGNGMPYLHVLVAGLINGNFDKASNWSGIVQ 222
            P   +Y +M+    +    + A  L  +MQ   +    +    L+NG +DK    + +  
Sbjct: 803  PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNG-YDKMGRRAEMF- 860

Query: 221  PAFDSITVNGIEDYTMFFNSLLDALWWAGQRSRATRVLVE 102
            P FD     GIE   + ++ +++A    G  ++A  VLV+
Sbjct: 861  PVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKAL-VLVD 899
tr_hit_id A9RIA0
Definition tr|A9RIA0|A9RIA0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 140
Score (bit) 137.0
E-value 3.0e-31
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916301|Adiantum capillus-veneris mRNA, clone:
YMU001_000086_B05.
         (433 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RIA0|A9RIA0_PHYPA Predicted protein OS=Physcomitrella paten...   137   3e-31
tr|A7PD90|A7PD90_VITVI Chromosome chr17 scaffold_12, whole genom...   132   7e-30
tr|Q852B8|Q852B8_ORYSJ Putative chloroplast RNA processing prote...   127   3e-28
tr|Q0DM76|Q0DM76_ORYSJ Os03g0824100 protein (Fragment) OS=Oryza ...   127   3e-28
tr|B8AMP2|B8AMP2_ORYSI Putative uncharacterized protein OS=Oryza...   127   3e-28
tr|A3AP77|A3AP77_ORYSJ Putative uncharacterized protein OS=Oryza...   127   3e-28
tr|A9TSP1|A9TSP1_PHYPA Predicted protein OS=Physcomitrella paten...    59   2e-07
tr|A9STA3|A9STA3_PHYPA Predicted protein OS=Physcomitrella paten...    58   2e-07
tr|A7Q0P9|A7Q0P9_VITVI Chromosome chr7 scaffold_42, whole genome...    57   4e-07
tr|Q2QNK3|Q2QNK3_ORYSJ Expressed protein OS=Oryza sativa subsp. ...    49   1e-04
tr|Q0IML9|Q0IML9_ORYSJ Os12g0562300 protein (Fragment) OS=Oryza ...    49   1e-04
tr|A7QMW3|A7QMW3_VITVI Chromosome chr14 scaffold_128, whole geno...    47   5e-04
tr|A5B1M4|A5B1M4_VITVI Putative uncharacterized protein OS=Vitis...    47   6e-04
tr|A2Q1M9|A2Q1M9_MEDTR Tetratricopeptide-like helical OS=Medicag...    44   0.003
tr|A9TFE2|A9TFE2_PHYPA Predicted protein OS=Physcomitrella paten...    44   0.004
tr|Q6ZHK7|Q6ZHK7_ORYSJ Putative fertility restorer homologue OS=...    44   0.005
tr|A3CIG3|A3CIG3_ORYSJ Putative uncharacterized protein OS=Oryza...    44   0.005
tr|A3C121|A3C121_ORYSJ Putative uncharacterized protein OS=Oryza...    44   0.005
tr|A2YLG1|A2YLG1_ORYSI Putative uncharacterized protein OS=Oryza...    44   0.005
tr|A9TFK6|A9TFK6_PHYPA Predicted protein OS=Physcomitrella paten...    43   0.007
tr|A5JVC1|A5JVC1_BRACM Putative uncharacterized protein OS=Brass...    43   0.007
tr|Q9AY93|Q9AY93_ORYSA Putative membrane-associated salt-inducib...    43   0.009
tr|Q94JE2|Q94JE2_ORYSJ Putative uncharacterized protein P0030H07...    43   0.009
tr|Q10HZ9|Q10HZ9_ORYSJ cDNA clone:J023045J04, full insert sequen...    43   0.009
tr|Q0JQL2|Q0JQL2_ORYSJ Os01g0153200 protein OS=Oryza sativa subs...    43   0.009
tr|Q0DQQ9|Q0DQQ9_ORYSJ Os03g0569800 protein OS=Oryza sativa subs...    43   0.009
tr|A3AJP5|A3AJP5_ORYSJ Putative uncharacterized protein OS=Oryza...    43   0.009
tr|A2ZPD5|A2ZPD5_ORYSJ Putative uncharacterized protein OS=Oryza...    43   0.009
tr|A2XIP3|A2XIP3_ORYSI Putative uncharacterized protein OS=Oryza...    43   0.009
tr|A2WKT3|A2WKT3_ORYSI Putative uncharacterized protein OS=Oryza...    43   0.009

>tr|A9RIA0|A9RIA0_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_175123 PE=4 SV=1
          Length = 779

 Score =  137 bits (345), Expect = 3e-31
 Identities = 66/140 (47%), Positives = 94/140 (67%)
 Frame = -3

Query: 431 FLEIKELCSVPQVTSYILMLSISARRSRWDDAHGLLDEMQGNGMPYLHVLVAGLINGNFD 252
           FL+++    +P V SY L+LS+ ARR+RWDDA  +L+EM    MP ++ +V G++ G  D
Sbjct: 518 FLDLQVGGELPSVDSYCLLLSVCARRNRWDDASKVLEEMLEPNMPSIYGVVGGILKGEMD 577

Query: 251 KASNWSGIVQPAFDSITVNGIEDYTMFFNSLLDALWWAGQRSRATRVLVEGRRRGVFPES 72
             +NW   V+ AFD + V+G+     F+N+LL+ALW  GQR RA RV  E R+RGV  E+
Sbjct: 578 DGTNWQR-VEYAFDGLKVDGVGSNLRFYNALLEALWCLGQRERACRVFAEARKRGVLAEA 636

Query: 71  LSKSSTLWSLDVHRMSVGTA 12
            S+S  +W++DVHRMSVG A
Sbjct: 637 FSRSDLMWAIDVHRMSVGAA 656


>tr|A7PD90|A7PD90_VITVI Chromosome chr17 scaffold_12, whole genome
            shotgun sequence OS=Vitis vinifera GN=GSVIVT00016182001
            PE=4 SV=1
          Length = 869

 Score =  132 bits (333), Expect = 7e-30
 Identities = 65/140 (46%), Positives = 90/140 (64%)
 Frame = -3

Query: 431  FLEIKELCSVPQVTSYILMLSISARRSRWDDAHGLLDEMQGNGMPYLHVLVAGLINGNFD 252
            F EIK L  +P V  Y +ML++ A+  RWDDAH LLDEM  N +  +H ++  +I G++D
Sbjct: 590  FGEIKALGILPSVMCYCMMLAVYAKADRWDDAHQLLDEMFTNRVSNIHQVIGQMIRGDYD 649

Query: 251  KASNWSGIVQPAFDSITVNGIEDYTMFFNSLLDALWWAGQRSRATRVLVEGRRRGVFPES 72
              SNW  +V+  F+ +   G      F+N+LL+ALWW GQ+ RATRVL E  +RG+FPE 
Sbjct: 650  DDSNWQ-MVEYVFEKLKSEGCSLGVRFYNTLLEALWWLGQKERATRVLNEATKRGLFPEL 708

Query: 71   LSKSSTLWSLDVHRMSVGTA 12
              K+  +WS+DVHRM  G A
Sbjct: 709  FRKNKLVWSVDVHRMWEGAA 728


>tr|Q852B8|Q852B8_ORYSJ Putative chloroplast RNA processing protein
           (Pentatricopeptide, putative, expressed) OS=Oryza sativa
           subsp. japonica GN=OSJNBb0081B07.6 PE=4 SV=1
          Length = 863

 Score =  127 bits (319), Expect = 3e-28
 Identities = 60/138 (43%), Positives = 87/138 (63%)
 Frame = -3

Query: 431 FLEIKELCSVPQVTSYILMLSISARRSRWDDAHGLLDEMQGNGMPYLHVLVAGLINGNFD 252
           F E++ + +VP + +Y +MLS+ AR  RW DA+ LL+EM+ N     H ++A +I G +D
Sbjct: 584 FEELQSMVTVPSIIAYCMMLSLYARNDRWTDAYDLLEEMKTNRASSTHQVIASMIKGEYD 643

Query: 251 KASNWSGIVQPAFDSITVNGIEDYTMFFNSLLDALWWAGQRSRATRVLVEGRRRGVFPES 72
             SNW  +V+   D+  + G +    FFN+LLD LWW GQ+ RA RVL +  + G+FPE 
Sbjct: 644 DDSNWQ-MVEYVLDNSNLEGCDYSLRFFNALLDVLWWFGQKGRAARVLDQALKYGLFPEL 702

Query: 71  LSKSSTLWSLDVHRMSVG 18
              +  +WS DVHRMSVG
Sbjct: 703 FRDTKLVWSADVHRMSVG 720


>tr|Q0DM76|Q0DM76_ORYSJ Os03g0824100 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os03g0824100 PE=4 SV=1
          Length = 691

 Score =  127 bits (319), Expect = 3e-28
 Identities = 60/138 (43%), Positives = 87/138 (63%)
 Frame = -3

Query: 431 FLEIKELCSVPQVTSYILMLSISARRSRWDDAHGLLDEMQGNGMPYLHVLVAGLINGNFD 252
           F E++ + +VP + +Y +MLS+ AR  RW DA+ LL+EM+ N     H ++A +I G +D
Sbjct: 412 FEELQSMVTVPSIIAYCMMLSLYARNDRWTDAYDLLEEMKTNRASSTHQVIASMIKGEYD 471

Query: 251 KASNWSGIVQPAFDSITVNGIEDYTMFFNSLLDALWWAGQRSRATRVLVEGRRRGVFPES 72
             SNW  +V+   D+  + G +    FFN+LLD LWW GQ+ RA RVL +  + G+FPE 
Sbjct: 472 DDSNWQ-MVEYVLDNSNLEGCDYSLRFFNALLDVLWWFGQKGRAARVLDQALKYGLFPEL 530

Query: 71  LSKSSTLWSLDVHRMSVG 18
              +  +WS DVHRMSVG
Sbjct: 531 FRDTKLVWSADVHRMSVG 548


>tr|B8AMP2|B8AMP2_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_14128 PE=4 SV=1
          Length = 669

 Score =  127 bits (319), Expect = 3e-28
 Identities = 60/138 (43%), Positives = 87/138 (63%)
 Frame = -3

Query: 431 FLEIKELCSVPQVTSYILMLSISARRSRWDDAHGLLDEMQGNGMPYLHVLVAGLINGNFD 252
           F E++ + +VP + +Y +MLS+ AR  RW DA+ LL+EM+ N     H ++A +I G +D
Sbjct: 390 FEELQSMVTVPSIIAYCMMLSLYARNDRWTDAYDLLEEMKTNRASSTHQVIASMIKGEYD 449

Query: 251 KASNWSGIVQPAFDSITVNGIEDYTMFFNSLLDALWWAGQRSRATRVLVEGRRRGVFPES 72
             SNW  +V+   D+  + G +    FFN+LLD LWW GQ+ RA RVL +  + G+FPE 
Sbjct: 450 DDSNWQ-MVEYVLDNSNLEGCDYSLRFFNALLDVLWWFGQKGRAARVLDQALKYGLFPEL 508

Query: 71  LSKSSTLWSLDVHRMSVG 18
              +  +WS DVHRMSVG
Sbjct: 509 FRDTKLVWSADVHRMSVG 526


>tr|A3AP77|A3AP77_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_012599 PE=4 SV=1
          Length = 988

 Score =  127 bits (319), Expect = 3e-28
 Identities = 60/138 (43%), Positives = 87/138 (63%)
 Frame = -3

Query: 431 FLEIKELCSVPQVTSYILMLSISARRSRWDDAHGLLDEMQGNGMPYLHVLVAGLINGNFD 252
           F E++ + +VP + +Y +MLS+ AR  RW DA+ LL+EM+ N     H ++A +I G +D
Sbjct: 584 FEELQSMVTVPSIIAYCMMLSLYARNDRWTDAYDLLEEMKTNRASSTHQVIASMIKGEYD 643

Query: 251 KASNWSGIVQPAFDSITVNGIEDYTMFFNSLLDALWWAGQRSRATRVLVEGRRRGVFPES 72
             SNW  +V+   D+  + G +    FFN+LLD LWW GQ+ RA RVL +  + G+FPE 
Sbjct: 644 DDSNWQ-MVEYVLDNSNLEGCDYSLRFFNALLDVLWWFGQKGRAARVLDQALKYGLFPEL 702

Query: 71  LSKSSTLWSLDVHRMSVG 18
              +  +WS DVHRMSVG
Sbjct: 703 FRDTKLVWSADVHRMSVG 720


>tr|A9TSP1|A9TSP1_PHYPA Predicted protein OS=Physcomitrella patens
            subsp. patens GN=PHYPADRAFT_197840 PE=4 SV=1
          Length = 871

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 45/143 (31%), Positives = 72/143 (50%), Gaps = 3/143 (2%)
 Frame = -3

Query: 431  FLEIKELCSVPQVTSYILMLSISARRSRWDDAHGLLDEMQG-NGMPY--LHVLVAGLING 261
            F E+++    P V ++  +L+  +R +   +A  LL++M+  +G  Y   H L+ GL   
Sbjct: 615  FHEMQQFGLKPNVVTFSAILNACSRCASLQEASVLLEQMRFFDGWVYGIAHGLLMGLREQ 674

Query: 260  NFDKASNWSGIVQPAFDSITVNGIEDYTMFFNSLLDALWWAGQRSRATRVLVEGRRRGVF 81
             + +A       Q  FD I+         F+N+L D LW  GQR  A  V+V  +RR V+
Sbjct: 675  VWVEA-------QRLFDEISRMDYATGAAFYNALTDVLWHFGQRQGAQEVVVAAKRRQVW 727

Query: 80   PESLSKSSTLWSLDVHRMSVGTA 12
              +  +S   + LD+H MSVG A
Sbjct: 728  ENAWWRSEQQFCLDLHLMSVGAA 750



 Score = 37.7 bits (86), Expect = 0.29
 Identities = 31/125 (24%), Positives = 57/125 (45%)
 Frame = -3

Query: 425 EIKELCSVPQVTSYILMLSISARRSRWDDAHGLLDEMQGNGMPYLHVLVAGLINGNFDKA 246
           ++KE    P   SY  ++ I A+  R+DDA     +M+  G+    V    LI+  + K 
Sbjct: 401 DMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDA-YGKQ 459

Query: 245 SNWSGIVQPAFDSITVNGIEDYTMFFNSLLDALWWAGQRSRATRVLVEGRRRGVFPESLS 66
             +       FD +   G+    + +++L+D+   AG     + V  E +R G+ P+ + 
Sbjct: 460 GKYKDAAC-LFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVL 518

Query: 65  KSSTL 51
            SS +
Sbjct: 519 YSSLI 523


>tr|A9STA3|A9STA3_PHYPA Predicted protein OS=Physcomitrella patens
            subsp. patens GN=PHYPADRAFT_188228 PE=4 SV=1
          Length = 871

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 43/140 (30%), Positives = 70/140 (50%)
 Frame = -3

Query: 431  FLEIKELCSVPQVTSYILMLSISARRSRWDDAHGLLDEMQGNGMPYLHVLVAGLINGNFD 252
            F E+++    P V ++  +L+  +R S   +A  LL++M+     +++ +  GL+ G  +
Sbjct: 615  FHEMQQFGLKPNVVTFSAILNACSRCSSLQEASVLLEQMRFFDS-WVYGIAHGLLMGLRE 673

Query: 251  KASNWSGIVQPAFDSITVNGIEDYTMFFNSLLDALWWAGQRSRATRVLVEGRRRGVFPES 72
                W    Q  FD I          F+N+L D LW  GQR  A  V+V  +RR V+  +
Sbjct: 674  HV--WVE-AQRLFDEIARMDYATGAAFYNALTDVLWHFGQRQGAQEVVVAAKRRQVWENA 730

Query: 71   LSKSSTLWSLDVHRMSVGTA 12
              +S   + LD+H MSVG A
Sbjct: 731  WWRSEQQFCLDLHLMSVGAA 750



 Score = 47.0 bits (110), Expect = 5e-04
 Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 2/127 (1%)
 Frame = -3

Query: 425 EIKELCSVPQVTSYILMLSISARRSRWDDAHGLLDEMQGNGMPYLHVLVAGLIN--GNFD 252
           ++KE    P   SY  ++ I A+  R+DDA     +M+  G+    V    LI+  G   
Sbjct: 400 DMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQG 459

Query: 251 KASNWSGIVQPAFDSITVNGIEDYTMFFNSLLDALWWAGQRSRATRVLVEGRRRGVFPES 72
           K  + +G+    FD +   G+    + +++L+DA   AG    AT + VE +R G+ P+ 
Sbjct: 460 KYKDAAGL----FDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDV 515

Query: 71  LSKSSTL 51
           +  SS +
Sbjct: 516 VLYSSLI 522


>tr|A7Q0P9|A7Q0P9_VITVI Chromosome chr7 scaffold_42, whole genome
            shotgun sequence OS=Vitis vinifera GN=GSVIVT00028134001
            PE=4 SV=1
          Length = 867

 Score = 57.4 bits (137), Expect = 4e-07
 Identities = 45/140 (32%), Positives = 71/140 (50%)
 Frame = -3

Query: 431  FLEIKELCSVPQVTSYILMLSISARRSRWDDAHGLLDEMQGNGMPYLHVLVAGLINGNFD 252
            F ++ EL   P V ++  +L+  +R + ++DA  LL+E++      ++ +  GL+ G  D
Sbjct: 623  FHKMHELDIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQ-VYGVAHGLLMGYGD 681

Query: 251  KASNWSGIVQPAFDSITVNGIEDYTMFFNSLLDALWWAGQRSRATRVLVEGRRRGVFPES 72
                W    Q  FD +        + F+N+L D LW  GQR  A  V++EG+RR V+   
Sbjct: 682  NV--WVQ-AQSLFDEVKQMDSSTASAFYNALTDMLWHFGQRRGAQLVVLEGKRRHVWENM 738

Query: 71   LSKSSTLWSLDVHRMSVGTA 12
             S S     LD+H MS G A
Sbjct: 739  WSNS----CLDLHLMSSGAA 754



 Score = 33.5 bits (75), Expect = 5.5
 Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
 Frame = -3

Query: 329 LLDEMQGNGMPYLHVLVAGLI-----NGNFDKASNWSGIVQPAFDSITVNGIEDYTMFFN 165
           + DEM  NG+    +    L+      G ++ A N        F  +   GIE     +N
Sbjct: 278 IFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARN-------LFSEMLYRGIEQDIFTYN 330

Query: 164 SLLDALWWAGQRSRATRVLVEGRRRGVFPESLSKSSTL 51
           +LLDA+   GQ   A +++ E  R+ + P  ++ S+ +
Sbjct: 331 TLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVI 368


>tr|Q2QNK3|Q2QNK3_ORYSJ Expressed protein OS=Oryza sativa subsp.
           japonica GN=LOC_Os12g37550 PE=4 SV=2
          Length = 295

 Score = 48.9 bits (115), Expect = 1e-04
 Identities = 37/130 (28%), Positives = 69/130 (53%)
 Frame = -3

Query: 401 PQVTSYILMLSISARRSRWDDAHGLLDEMQGNGMPYLHVLVAGLINGNFDKASNWSGIVQ 222
           P V ++  +L+  +R + ++DA  LL++++     +++ +  GL+ G+ +    WS   Q
Sbjct: 63  PNVVTFSAILNACSRCNSFEDAALLLEQLRLFDN-FVYGVAYGLLVGSREV---WSQ-AQ 117

Query: 221 PAFDSITVNGIEDYTMFFNSLLDALWWAGQRSRATRVLVEGRRRGVFPESLSKSSTLWSL 42
             F+ +        + F+N+L D LW  GQR +A +V+ EG  R V+  +  +    + L
Sbjct: 118 SLFNQLGRMDSPTSSAFYNALTDVLWHFGQRRKAQQVVFEGINRRVWENTWGE----FCL 173

Query: 41  DVHRMSVGTA 12
           D+H MS G A
Sbjct: 174 DLHLMSCGAA 183