BP916304 |
Clone id |
YMU001_000086_B08 |
Library |
YMU01 |
Length |
477 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000086_B08. |
Accession |
BP916304 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL465Contig1 |
Sequence |
GTTTGATTGCCTCTACTTTTTCACCAGGAAGCACCTCGGCAATGACATGATCGAATGCCA ACCTCTTTGGCAATGGCACGTGCTGTCCTCCAGTTATCACCTGTAACCATTATGCTCGAA ATGCCCATCCGCTTCAATGCCTCTACCGCCACAGCTGCCTCTAGTTTCAAAGGGTCTGCT ATCCCAAAAACTCCATGTAAAAGCCCATCGATTGCTACCAAGACCTCCGATCTTGCTTTT TGTTCGATGTCTAACAAATGAGCTTCAGCCTCTAAAGAGATTGTGACGCCTTCCTCTTCA AAAAGTCTTCTATTGCCAACCAAGAGGTTCCTCTTCTCAATGACGCAGCGCAATCCCTTC CCTGAAATAGTCTCAAATGAAGCAACATTCCTCAACCAGCCGGTGTTCCTGACATTCACT ACATTCTCAATACTGTCATCTTGAGAGGAAAGAACTCCATTCATGTAATCTACTATA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9S7J8 |
Definition |
sp|Q9S7J8|AHM5_ARATH Copper-transporting ATPase RAN1 OS=Arabidopsis thaliana |
Align length |
131 |
Score (bit) |
119.0 |
E-value |
7.0e-27 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916304|Adiantum capillus-veneris mRNA, clone: YMU001_000086_B08. (477 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9S7J8|AHM5_ARATH Copper-transporting ATPase RAN1 OS=Arabidop... 119 7e-27 sp|Q9SH30|AHM7_ARATH Putative copper-transporting ATPase 3 OS=Ar... 88 2e-17 sp|Q8CN02|COPA_STAES Copper-exporting P-type ATPase A OS=Staphyl... 75 8e-16 sp|Q5HL56|COPA_STAEQ Copper-exporting P-type ATPase A OS=Staphyl... 75 8e-16 sp|O29777|COPA_ARCFU Probable copper-exporting P-type ATPase A O... 76 2e-15 sp|Q4L970|COPA_STAHJ Copper-exporting P-type ATPase A OS=Staphyl... 75 4e-14 sp|Q6GDP1|COPA_STAAR Copper-exporting P-type ATPase A OS=Staphyl... 71 2e-13 sp|Q7A3E6|COPA_STAAN Copper-exporting P-type ATPase A OS=Staphyl... 71 2e-13 sp|Q99R80|COPA_STAAM Copper-exporting P-type ATPase A OS=Staphyl... 71 2e-13 sp|A6QK47|COPA_STAAE Copper-exporting P-type ATPase A OS=Staphyl... 71 2e-13 sp|Q5HCZ3|COPA_STAAC Copper-exporting P-type ATPase A OS=Staphyl... 71 2e-13 sp|Q2YWA3|COPA_STAAB Copper-exporting P-type ATPase A OS=Staphyl... 71 2e-13 sp|A5IVY3|COPA_STAA9 Copper-exporting P-type ATPase A OS=Staphyl... 71 2e-13 sp|Q2FV64|COPA_STAA8 Copper-exporting P-type ATPase A OS=Staphyl... 71 2e-13 sp|A6U4T8|COPA_STAA2 Copper-exporting P-type ATPase A OS=Staphyl... 71 2e-13 sp|A7X6S1|COPA_STAA1 Copper-exporting P-type ATPase A OS=Staphyl... 71 2e-13 sp|Q4A0G1|COPA_STAS1 Copper-exporting P-type ATPase A OS=Staphyl... 74 3e-13 sp|Q8NUQ9|COPA_STAAW Copper-exporting P-type ATPase A OS=Staphyl... 70 4e-13 sp|Q6G6B7|COPA_STAAS Copper-exporting P-type ATPase A OS=Staphyl... 70 4e-13 sp|A8Z3F8|COPA_STAAT Copper-exporting P-type ATPase A OS=Staphyl... 70 5e-13 sp|Q2FDV0|COPA_STAA3 Copper-exporting P-type ATPase A OS=Staphyl... 70 5e-13 sp|P35670|ATP7B_HUMAN Copper-transporting ATPase 2 OS=Homo sapie... 73 7e-13 sp|Q9KPZ7|COPA_VIBCH Copper-exporting P-type ATPase A OS=Vibrio ... 68 2e-12 sp|Q64535|ATP7B_RAT Copper-transporting ATPase 2 OS=Rattus norve... 71 3e-12 sp|Q64446|ATP7B_MOUSE Copper-transporting ATPase 2 OS=Mus muscul... 71 3e-12 sp|Q9XT50|ATP7B_SHEEP Copper-transporting ATPase 2 OS=Ovis aries... 70 4e-12 sp|Q9X5X3|ATCU_SINMW Copper-transporting P-type ATPase OS=Sinorh... 60 9e-12 sp|P58342|ATCU2_RHIME Copper-transporting ATPase 2 OS=Rhizobium ... 59 9e-12 sp|P77894|CTPV_MYCTU Probable cation-transporting ATPase V OS=My... 69 1e-11 sp|P58341|ATCU1_RHIME Copper-transporting ATPase 1 OS=Rhizobium ... 56 1e-10
>sp|Q9S7J8|AHM5_ARATH Copper-transporting ATPase RAN1 OS=Arabidopsis thaliana GN=RAN1 PE=1 SV=1 Length = 1001
Score = 119 bits (298), Expect = 7e-27 Identities = 57/131 (43%), Positives = 83/131 (63%) Frame = -2
Query: 446 SQDDSIENVVNVRNTGWLRNVASFETISGKGLRCVIEKRNLLVGNRRLFEEEGVTISLEA 267 S +D N +++N+GWL + + F + GKG++C++ ++ +LVGNR+L E + I Sbjct: 716 STEDGETNNKDLQNSGWLLDTSDFSALPGKGIQCLVNEKMILVGNRKLMSENAINIPDHV 775
Query: 266 EAHLLDIEQKARSEVLVAIDGLLHGVFGIADPXXXXXXXXXXXXKRMGISSIMVTGDNWR 87 E + D+E+ ++ V+VA +G L GV GIADP RMG+ IMVTGDNWR Sbjct: 776 EKFVEDLEESGKTGVIVAYNGKLVGVMGIADPLKREAALVVEGLLRMGVRPIMVTGDNWR 835
Query: 86 TARAIAKEVGI 54 TARA+AKEVGI Sbjct: 836 TARAVAKEVGI 846
>sp|Q9SH30|AHM7_ARATH Putative copper-transporting ATPase 3 OS=Arabidopsis thaliana GN=HMA5 PE=2 SV=2 Length = 995
Score = 87.8 bits (216), Expect = 2e-17 Identities = 49/120 (40%), Positives = 69/120 (57%) Frame = -2
Query: 407 NTGWLRNVASFETISGKGLRCVIEKRNLLVGNRRLFEEEGVTISLEAEAHLLDIEQKARS 228 N W F +I+GKG++ ++ R ++VGN+ L + V I +AE L D E A++ Sbjct: 719 NPAW-PEACDFVSITGKGVKATVKGREIMVGNKNLMNDHKVIIPDDAEELLADSEDMAQT 777
Query: 227 EVLVAIDGLLHGVFGIADPXXXXXXXXXXXXKRMGISSIMVTGDNWRTARAIAKEVGIRS 48 +LV+I+ L GV ++DP K M I SIMVTGDNW TA +IA+EVGI S Sbjct: 778 GILVSINSELIGVLSVSDPLKPSAREAISILKSMNIKSIMVTGDNWGTANSIAREVGIDS 837
>sp|Q8CN02|COPA_STAES Copper-exporting P-type ATPase A OS=Staphylococcus epidermidis (strain ATCC 12228) GN=copA PE=3 SV=1 Length = 794
Score = 75.1 bits (183), Expect(2) = 8e-16 Identities = 36/109 (33%), Positives = 64/109 (58%) Frame = -2
Query: 380 SFETISGKGLRCVIEKRNLLVGNRRLFEEEGVTISLEAEAHLLDIEQKARSEVLVAIDGL 201 +F++I G G++ I ++ +LVGNR+L + ++IS + L E ++ +++A+D Sbjct: 550 TFKSIPGHGIKATIHQQQILVGNRKLMNDYNISISNKLNDQLNHYEHLGQTAMMIAVDNQ 609
Query: 200 LHGVFGIADPXXXXXXXXXXXXKRMGISSIMVTGDNWRTARAIAKEVGI 54 ++G+ +AD + M I +M+TGDN RTA+ IAK+VGI Sbjct: 610 INGIIAVADTVKNDAKQAIKELRNMNIDVVMLTGDNNRTAQTIAKQVGI 658
Score = 28.1 bits (61), Expect(2) = 8e-16 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = -3
Query: 73 LPKRLAFDHVIAEVLPGEKVEAI 5 + K++ +HVIAEVLP EK I Sbjct: 652 IAKQVGIEHVIAEVLPEEKAHQI 674
>sp|Q5HL56|COPA_STAEQ Copper-exporting P-type ATPase A OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=copA PE=3 SV=1 Length = 794
Score = 75.1 bits (183), Expect(2) = 8e-16 Identities = 36/109 (33%), Positives = 64/109 (58%) Frame = -2
Query: 380 SFETISGKGLRCVIEKRNLLVGNRRLFEEEGVTISLEAEAHLLDIEQKARSEVLVAIDGL 201 +F++I G G++ I ++ +LVGNR+L + ++IS + L E ++ +++A+D Sbjct: 550 TFKSIPGHGIKATIHQQQILVGNRKLMNDYNISISNKLNDQLNHYEHLGQTAMMIAVDNQ 609
Query: 200 LHGVFGIADPXXXXXXXXXXXXKRMGISSIMVTGDNWRTARAIAKEVGI 54 ++G+ +AD + M I +M+TGDN RTA+ IAK+VGI Sbjct: 610 INGIIAVADTVKNDAKQAIKELRNMNIDVVMLTGDNNRTAQTIAKQVGI 658
Score = 28.1 bits (61), Expect(2) = 8e-16 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = -3
Query: 73 LPKRLAFDHVIAEVLPGEKVEAI 5 + K++ +HVIAEVLP EK I Sbjct: 652 IAKQVGIEHVIAEVLPEEKAHQI 674
>sp|O29777|COPA_ARCFU Probable copper-exporting P-type ATPase A OS=Archaeoglobus fulgidus GN=copA PE=1 SV=1 Length = 804
Score = 76.3 bits (186), Expect(2) = 2e-15 Identities = 41/107 (38%), Positives = 65/107 (60%) Frame = -2
Query: 374 ETISGKGLRCVIEKRNLLVGNRRLFEEEGVTISLEAEAHLLDIEQKARSEVLVAIDGLLH 195 E I+G+G + +LVGN+RL E+ GV +S E E L +E++A++ V+VA +G + Sbjct: 486 EVIAGEG----VVADGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVARNGRVE 541
Query: 194 GVFGIADPXXXXXXXXXXXXKRMGISSIMVTGDNWRTARAIAKEVGI 54 G+ ++D KRMGI M+TGDNWR+A AI++E+ + Sbjct: 542 GIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL 588
Score = 25.8 bits (55), Expect(2) = 2e-15 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = -3
Query: 73 LPKRLAFDHVIAEVLPGEKVEAIK 2 + + L D VIAEVLP +K E +K Sbjct: 582 ISRELNLDLVIAEVLPHQKSEEVK 605
>sp|Q4L970|COPA_STAHJ Copper-exporting P-type ATPase A OS=Staphylococcus haemolyticus (strain JCSC1435) GN=copA PE=3 SV=1 Length = 795
Score = 75.5 bits (184), Expect(2) = 4e-14 Identities = 40/114 (35%), Positives = 65/114 (57%) Frame = -2
Query: 395 LRNVASFETISGKGLRCVIEKRNLLVGNRRLFEEEGVTISLEAEAHLLDIEQKARSEVLV 216 L NV +++T+ G G++ +I+ L VGN++L + + I + + +E + + +L+ Sbjct: 547 LVNVTNYQTLPGHGIQAIIDDSMLFVGNQKLMLDHQINIQ-SIKQKMKQMEAEGHTVMLI 605
Query: 215 AIDGLLHGVFGIADPXXXXXXXXXXXXKRMGISSIMVTGDNWRTARAIAKEVGI 54 A DG L G+ +AD M I ++M+TGDN RTA+AIAKEVGI Sbjct: 606 AYDGKLRGMIAVADTVKASAKEAIQQLSSMNIRTVMLTGDNERTAKAIAKEVGI 659
Score = 21.9 bits (45), Expect(2) = 4e-14 Identities = 10/23 (43%), Positives = 13/23 (56%) Frame = -3
Query: 73 LPKRLAFDHVIAEVLPGEKVEAI 5 + K + D VIA VLP +K I Sbjct: 653 IAKEVGIDQVIAGVLPEDKAHHI 675
>sp|Q6GDP1|COPA_STAAR Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain MRSA252) GN=copA PE=3 SV=1 Length = 802
Score = 70.9 bits (172), Expect(2) = 2e-13 Identities = 36/114 (31%), Positives = 60/114 (52%) Frame = -2
Query: 395 LRNVASFETISGKGLRCVIEKRNLLVGNRRLFEEEGVTISLEAEAHLLDIEQKARSEVLV 216 L +F+ + G G+ I+ ++LVGNR+L + +++ L E+ ++ +L+ Sbjct: 546 LTETTTFKAVPGHGIEATIDHHHILVGNRKLMADNDISLPKHISDDLTHYERDGKTAMLI 605
Query: 215 AIDGLLHGVFGIADPXXXXXXXXXXXXKRMGISSIMVTGDNWRTARAIAKEVGI 54 A++ L G+ +AD MGI M+TGDN TA+AIAK+VGI Sbjct: 606 AVNYSLTGIIAVADTVKDHAKDAIKQLHDMGIEVAMLTGDNKNTAQAIAKQVGI 659
Score = 23.9 bits (50), Expect(2) = 2e-13 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = -3
Query: 73 LPKRLAFDHVIAEVLPGEKVEAI 5 + K++ D VIA++LP EK I Sbjct: 653 IAKQVGIDTVIADILPEEKAAQI 675
>sp|Q7A3E6|COPA_STAAN Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain N315) GN=copA PE=1 SV=1 Length = 802
Score = 70.9 bits (172), Expect(2) = 2e-13 Identities = 36/114 (31%), Positives = 60/114 (52%) Frame = -2
Query: 395 LRNVASFETISGKGLRCVIEKRNLLVGNRRLFEEEGVTISLEAEAHLLDIEQKARSEVLV 216 L +F+ + G G+ I+ ++LVGNR+L + +++ L E+ ++ +L+ Sbjct: 546 LTETTTFKAVPGHGIEATIDHHHILVGNRKLMADNDISLPKHISDDLTHYERDGKTAMLI 605
Query: 215 AIDGLLHGVFGIADPXXXXXXXXXXXXKRMGISSIMVTGDNWRTARAIAKEVGI 54 A++ L G+ +AD MGI M+TGDN TA+AIAK+VGI Sbjct: 606 AVNYSLTGIIAVADTVKDHAKDAIKQLHDMGIEVAMLTGDNKNTAQAIAKQVGI 659
Score = 23.9 bits (50), Expect(2) = 2e-13 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = -3
Query: 73 LPKRLAFDHVIAEVLPGEKVEAI 5 + K++ D VIA++LP EK I Sbjct: 653 IAKQVGIDTVIADILPEEKAAQI 675
>sp|Q99R80|COPA_STAAM Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=copA PE=3 SV=1 Length = 802
Score = 70.9 bits (172), Expect(2) = 2e-13 Identities = 36/114 (31%), Positives = 60/114 (52%) Frame = -2
Query: 395 LRNVASFETISGKGLRCVIEKRNLLVGNRRLFEEEGVTISLEAEAHLLDIEQKARSEVLV 216 L +F+ + G G+ I+ ++LVGNR+L + +++ L E+ ++ +L+ Sbjct: 546 LTETTTFKAVPGHGIEATIDHHHILVGNRKLMADNDISLPKHISDDLTHYERDGKTAMLI 605
Query: 215 AIDGLLHGVFGIADPXXXXXXXXXXXXKRMGISSIMVTGDNWRTARAIAKEVGI 54 A++ L G+ +AD MGI M+TGDN TA+AIAK+VGI Sbjct: 606 AVNYSLTGIIAVADTVKDHAKDAIKQLHDMGIEVAMLTGDNKNTAQAIAKQVGI 659
Score = 23.9 bits (50), Expect(2) = 2e-13 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = -3
Query: 73 LPKRLAFDHVIAEVLPGEKVEAI 5 + K++ D VIA++LP EK I Sbjct: 653 IAKQVGIDTVIADILPEEKAAQI 675
>sp|A6QK47|COPA_STAAE Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain Newman) GN=copA PE=3 SV=1 Length = 802
Score = 70.9 bits (172), Expect(2) = 2e-13 Identities = 36/114 (31%), Positives = 60/114 (52%) Frame = -2
Query: 395 LRNVASFETISGKGLRCVIEKRNLLVGNRRLFEEEGVTISLEAEAHLLDIEQKARSEVLV 216 L +F+ + G G+ I+ ++LVGNR+L + +++ L E+ ++ +L+ Sbjct: 546 LTETTTFKAVPGHGIEATIDHHHILVGNRKLMADNDISLPKHISDDLTHYERDGKTAMLI 605
Query: 215 AIDGLLHGVFGIADPXXXXXXXXXXXXKRMGISSIMVTGDNWRTARAIAKEVGI 54 A++ L G+ +AD MGI M+TGDN TA+AIAK+VGI Sbjct: 606 AVNYSLTGIIAVADTVKDHAKDAIKQLHDMGIEVAMLTGDNKNTAQAIAKQVGI 659
Score = 23.9 bits (50), Expect(2) = 2e-13 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = -3
Query: 73 LPKRLAFDHVIAEVLPGEKVEAI 5 + K++ D VIA++LP EK I Sbjct: 653 IAKQVGIDTVIADILPEEKAAQI 675
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q94KD6 |
Definition |
tr|Q94KD6|Q94KD6_ARATH AT5g44790/K23L20_14 OS=Arabidopsis thaliana |
Align length |
131 |
Score (bit) |
119.0 |
E-value |
8.0e-26 |
Report |
|