BP916305 |
Clone id |
YMU001_000086_B10 |
Library |
YMU01 |
Length |
519 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000086_B10. |
Accession |
BP916305 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL736Contig1 |
Sequence |
GAGTGAAAAACAGCATACATACTCCTGATGTTGTTCAATTCTTACAAGACTGAGATGCAT TCGACTATAGCTACATGTGCGTCGCCGAACCCAGCATAGCTATGTGTGTATGTGTGTGTG TGTGTATGTCATGGATTGATAGAAAAGCTTCTCTGACAGGTGTAGGACTGAATGCCTCTG GCATTGAAAGATACATCAACGTTACATTTGGAGACGACGTCGGCATGGTGCGTGAACAGA TTGAGGGTAGTGACCTTACCAATAATGGTAACAGAAGTCGATACTTGAAGGATTCCATCA GCTACATCACCTTGAAGGTATGTCCCTTGGAGGGGTGCGGAGCCTTGTACAGTCAATGGA ATCGATATTGTCGAGAAAGACTCGGCCGGGATAGAGCCCGTCGGCACGGGGTTAAAGTCC ACCTGTGCGCCATAGTAGTAAAGGCAGGCGAAGCCTCCGTCTTGCACAATGAAGCTTGCC TTGTTGGGGTTGTAAATGGAGACTTGCAGGTTGAGGGTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q55A09 |
Definition |
sp|Q55A09|Y9963_DICDI Probable serine/threonine-protein kinase DDB_G0272254 OS=Dictyostelium discoideum |
Align length |
56 |
Score (bit) |
31.6 |
E-value |
2.3 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RUJ7 |
Definition |
tr|A9RUJ7|A9RUJ7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
124 |
Score (bit) |
71.6 |
E-value |
2.0e-11 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916305|Adiantum capillus-veneris mRNA, clone: YMU001_000086_B10. (519 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RUJ7|A9RUJ7_PHYPA Predicted protein OS=Physcomitrella paten... 72 2e-11 tr|Q9M386|Q9M386_ARATH Putative uncharacterized protein F24B22.1... 71 4e-11 tr|Q8LE22|Q8LE22_ARATH Putative uncharacterized protein OS=Arabi... 71 4e-11 tr|Q2QYH1|Q2QYH1_ORYSJ Os12g0119800 protein OS=Oryza sativa subs... 64 6e-09 tr|A2ZHI6|A2ZHI6_ORYSI Putative uncharacterized protein OS=Oryza... 64 6e-09 tr|A2ZAV7|A2ZAV7_ORYSI Putative uncharacterized protein OS=Oryza... 64 6e-09 tr|Q2RB97|Q2RB97_ORYSJ Harpin-induced protein 1 containing prote... 63 1e-08 tr|A5BBS3|A5BBS3_VITVI Putative uncharacterized protein OS=Vitis... 62 2e-08 tr|A2Y328|A2Y328_ORYSI Putative uncharacterized protein OS=Oryza... 61 4e-08 tr|A9T9T5|A9T9T5_PHYPA Predicted protein (Fragment) OS=Physcomit... 59 2e-07 tr|Q5Z9B4|Q5Z9B4_ORYSJ Putative uncharacterized protein P0485D10... 57 5e-07 tr|A3BC83|A3BC83_ORYSJ Putative uncharacterized protein OS=Oryza... 57 5e-07 tr|A2YDJ2|A2YDJ2_ORYSI Putative uncharacterized protein OS=Oryza... 57 5e-07 tr|Q1STP6|Q1STP6_MEDTR Harpin-induced 1 OS=Medicago truncatula G... 56 1e-06 tr|A5CBV1|A5CBV1_VITVI Putative uncharacterized protein OS=Vitis... 55 2e-06 tr|A7PZK6|A7PZK6_VITVI Chromosome chr15 scaffold_40, whole genom... 55 3e-06 tr|A7QU87|A7QU87_VITVI Chromosome chr2 scaffold_176, whole genom... 54 5e-06 tr|Q9T0A8|Q9T0A8_ARATH Putative uncharacterized protein AT4g2393... 53 1e-05 tr|A7QWD8|A7QWD8_VITVI Chromosome undetermined scaffold_203, who... 52 1e-05 tr|Q3E6Y9|Q3E6Y9_ARATH Uncharacterized protein At4g23930.2 OS=Ar... 49 1e-04 tr|Q19QU4|Q19QU4_SOLLC Plant cell wall protein SlTFR88 OS=Solanu... 49 1e-04 tr|A3A5B9|A3A5B9_ORYSJ Putative uncharacterized protein OS=Oryza... 46 0.001 tr|A2Y5U9|A2Y5U9_ORYSI Putative uncharacterized protein OS=Oryza... 46 0.001 tr|A2X380|A2X380_ORYSI Putative uncharacterized protein OS=Oryza... 46 0.001 tr|Q3EBB9|Q3EBB9_ARATH Uncharacterized protein At3g05975.1 (Puta... 46 0.001 tr|A9S559|A9S559_PHYPA Predicted protein OS=Physcomitrella paten... 44 0.005 tr|A3BKH1|A3BKH1_ORYSJ Putative uncharacterized protein OS=Oryza... 44 0.005 tr|A2WRA4|A2WRA4_ORYSI Putative uncharacterized protein OS=Oryza... 42 0.014 tr|Q942B1|Q942B1_ORYSJ cDNA clone:002-181-G07, full insert seque... 42 0.018 tr|A5B9J9|A5B9J9_VITVI Putative uncharacterized protein OS=Vitis... 42 0.018
>tr|A9RUJ7|A9RUJ7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_70743 PE=4 SV=1 Length = 188
Score = 71.6 bits (174), Expect = 2e-11 Identities = 38/124 (30%), Positives = 66/124 (53%) Frame = -2
Query: 518 TLNLQVSIYNPNKASFIVQDGGFACLYYYGAQVDFNPVPTGSIPAESFSTISIPLTVQGS 339 +L L +++ NPN+ASF +G L+YYG V +P G I +++ +S+ L V+ S Sbjct: 63 SLLLDITVSNPNRASFTYSNG-LTRLFYYGDPVGQALIPAGKIKSKADEYLSVLLFVEAS 121
Query: 338 APLQGTYLQGDVADGILQVSTSVTIIGKVTTLNLFTHHADVVSKCNVDVSFNARGIQSYT 159 + L G++ G L V + T+ G + L +F HHA S C++ + +QS+ Sbjct: 122 RVIMNANLPGNIVSGRLPVVATTTLTGTLKVLGVFKHHALSTSDCDIFIFVANATVQSFY 181
Query: 158 CQRS 147 C+ + Sbjct: 182 CRHA 185
>tr|Q9M386|Q9M386_ARATH Putative uncharacterized protein F24B22.160 (Putative uncharacterized protein At3g54200) OS=Arabidopsis thaliana GN=F24B22.160 PE=2 SV=1 Length = 235
Score = 70.9 bits (172), Expect = 4e-11 Identities = 41/124 (33%), Positives = 62/124 (50%) Frame = -2
Query: 518 TLNLQVSIYNPNKASFIVQDGGFACLYYYGAQVDFNPVPTGSIPAESFSTISIPLTVQGS 339 TLN+ +S+ NPN+ F D A L Y G + P+P I A ++I LT+ Sbjct: 110 TLNVDLSLKNPNRIGFSY-DSSSALLNYRGQVIGEAPLPANRIAARKTVPLNITLTLMAD 168
Query: 338 APLQGTYLQGDVADGILQVSTSVTIIGKVTTLNLFTHHADVVSKCNVDVSFNARGIQSYT 159 L T L DV G++ ++T V + GKVT L +F S C++ +S + R + S Sbjct: 169 RLLSETQLLSDVMAGVIPLNTFVKVTGKVTVLKIFKIKVQSSSSCDLSISVSDRNVTSQH 228
Query: 158 CQRS 147 C+ S Sbjct: 229 CKYS 232
>tr|Q8LE22|Q8LE22_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 235
Score = 70.9 bits (172), Expect = 4e-11 Identities = 41/124 (33%), Positives = 62/124 (50%) Frame = -2
Query: 518 TLNLQVSIYNPNKASFIVQDGGFACLYYYGAQVDFNPVPTGSIPAESFSTISIPLTVQGS 339 TLN+ +S+ NPN+ F D A L Y G + P+P I A ++I LT+ Sbjct: 110 TLNVDLSLKNPNRIGFSY-DSSSALLNYRGQVIGEAPLPANRIAARKTVPLNITLTLMAD 168
Query: 338 APLQGTYLQGDVADGILQVSTSVTIIGKVTTLNLFTHHADVVSKCNVDVSFNARGIQSYT 159 L T L DV G++ ++T V + GKVT L +F S C++ +S + R + S Sbjct: 169 RLLSETQLLSDVMAGVIPLNTFVKVTGKVTVLKIFKIKVQSSSSCDLSISVSNRNVTSQH 228
Query: 158 CQRS 147 C+ S Sbjct: 229 CKYS 232
>tr|Q2QYH1|Q2QYH1_ORYSJ Os12g0119800 protein OS=Oryza sativa subsp. japonica GN=Os12g0119800 PE=2 SV=1 Length = 233
Score = 63.5 bits (153), Expect = 6e-09 Identities = 40/123 (32%), Positives = 58/123 (47%), Gaps = 2/123 (1%) Frame = -2
Query: 518 TLNLQVSIYNPNKASFIVQDGGFACLYYYGAQVDFNPVPTGSIPAESFSTISIPLTVQGS 339 TL + V+++NPN ASF GG L Y GA V + G IP+ + +++ LT+Q Sbjct: 106 TLLITVAVHNPNPASFTYATGGHTDLTYRGAHVGDAEIDPGRIPSRGDANVTMALTLQAD 165
Query: 338 APLQG--TYLQGDVADGILQVSTSVTIIGKVTTLNLFTHHADVVSKCNVDVSFNARGIQS 165 G T L DV G + + S I G+V L +F HA S C+ ++S Sbjct: 166 R-FAGDLTQLVSDVMGGSVALDASTRIPGRVAILGVFKRHAVAYSDCHFVFGVTEMAVRS 224
Query: 164 YTC 156 C Sbjct: 225 QQC 227
>tr|A2ZHI6|A2ZHI6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_37266 PE=4 SV=1 Length = 233
Score = 63.5 bits (153), Expect = 6e-09 Identities = 40/123 (32%), Positives = 58/123 (47%), Gaps = 2/123 (1%) Frame = -2
Query: 518 TLNLQVSIYNPNKASFIVQDGGFACLYYYGAQVDFNPVPTGSIPAESFSTISIPLTVQGS 339 TL + V+++NPN ASF GG L Y GA V + G IP+ + +++ LT+Q Sbjct: 106 TLLITVAVHNPNPASFTYATGGHTDLTYRGAHVGDAEIDPGRIPSRGDANVTMALTLQAD 165
Query: 338 APLQG--TYLQGDVADGILQVSTSVTIIGKVTTLNLFTHHADVVSKCNVDVSFNARGIQS 165 G T L DV G + + S I G+V L +F HA S C+ ++S Sbjct: 166 R-FAGDLTQLVSDVMGGSVALDASTRIPGRVAILGVFKRHAVAYSDCHFVFGVTEMAVRS 224
Query: 164 YTC 156 C Sbjct: 225 QQC 227
>tr|A2ZAV7|A2ZAV7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_34899 PE=4 SV=1 Length = 235
Score = 63.5 bits (153), Expect = 6e-09 Identities = 40/123 (32%), Positives = 58/123 (47%), Gaps = 2/123 (1%) Frame = -2
Query: 518 TLNLQVSIYNPNKASFIVQDGGFACLYYYGAQVDFNPVPTGSIPAESFSTISIPLTVQGS 339 TL + V+++NPN ASF GG L Y GA V + G IP+ + +++ LT+Q Sbjct: 108 TLLITVAVHNPNPASFTYATGGHTDLTYRGAHVGDAEIDPGRIPSRGDANVTMALTLQAD 167
Query: 338 APLQG--TYLQGDVADGILQVSTSVTIIGKVTTLNLFTHHADVVSKCNVDVSFNARGIQS 165 G T L DV G + + S I G+V L +F HA S C+ ++S Sbjct: 168 R-FAGDLTQLVSDVMGGSVALEASTRIPGRVAILGVFKRHAVAYSDCHFVFGVTEMAVRS 226
Query: 164 YTC 156 C Sbjct: 227 QQC 229
>tr|Q2RB97|Q2RB97_ORYSJ Harpin-induced protein 1 containing protein, expressed OS=Oryza sativa subsp. japonica GN=Os11g0120100 PE=2 SV=1 Length = 235
Score = 62.8 bits (151), Expect = 1e-08 Identities = 40/123 (32%), Positives = 58/123 (47%), Gaps = 2/123 (1%) Frame = -2
Query: 518 TLNLQVSIYNPNKASFIVQDGGFACLYYYGAQVDFNPVPTGSIPAESFSTISIPLTVQGS 339 TL + V+++NPN ASF GG L Y GA V + G IP+ + +++ LT+Q Sbjct: 108 TLLITVAVHNPNPASFTYATGGHTDLTYRGAHVGDAEIDPGRIPSRGDANVTMALTLQAD 167
Query: 338 APLQG--TYLQGDVADGILQVSTSVTIIGKVTTLNLFTHHADVVSKCNVDVSFNARGIQS 165 G T L DV G + + S I G+V L +F HA S C+ ++S Sbjct: 168 R-FAGDLTQLVTDVMGGSVALEASTRIPGRVAILGVFKRHAVAYSDCHFVFGVTEMAVRS 226
Query: 164 YTC 156 C Sbjct: 227 QQC 229
>tr|A5BBS3|A5BBS3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022239 PE=4 SV=1 Length = 436
Score = 62.0 bits (149), Expect = 2e-08 Identities = 42/123 (34%), Positives = 60/123 (48%), Gaps = 1/123 (0%) Frame = -2
Query: 518 TLNLQVSIYNPNKASFIVQDGGFACLYYYGAQVDFNPVPTGSIPAESFSTISIPLTVQGS 339 TLNLQ+ + NPN ASF G + L Y G QV + G+IP +TI LT+Q Sbjct: 310 TLNLQILVENPNHASF-KHGSGQSILLYQGEQVGDVEIYPGNIPGRRSTTIPSRLTLQVD 368
Query: 338 APLQGT-YLQGDVADGILQVSTSVTIIGKVTTLNLFTHHADVVSKCNVDVSFNARGIQSY 162 T +L D+ G L + T I G+VT L L H +S C+ ++ ++S Sbjct: 369 KVASETLHLVQDILAGQLAMDTRTRIPGRVTFLGLIRKHVVAISDCHFVIAVPEMKVRSQ 428
Query: 161 TCQ 153 C+ Sbjct: 429 ECK 431
>tr|A2Y328|A2Y328_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_19417 PE=4 SV=1 Length = 213
Score = 60.8 bits (146), Expect = 4e-08 Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 7/129 (5%) Frame = -2
Query: 518 TLNLQVSIYNPNKASFIVQDGGFACLYYYGAQVDFNPVPTGSIPAESFSTISIPLTV--- 348 TL+ ++I NP+ + D G A +YY GA VP G + +++ LTV Sbjct: 84 TLDAVLAIRNPSPVAAFAHDAGRAEVYYRGALAADADVPPGRVAPRGSEALAVRLTVLAD 143
Query: 347 --QGSAPLQGTYLQGDV--ADGILQVSTSVTIIGKVTTLNLFTHHADVVSKCNVDVSFNA 180 G AP L GDV A G + ++ T+ G VT L +F HA V++ C+V +S Sbjct: 144 RLAGRAP----ELYGDVVGAAGDVPLTVRTTVPGTVTVLGVFRRHAVVITACDVALSVRR 199
Query: 179 RGIQSYTCQ 153 G S +C+ Sbjct: 200 PGAHSSSCR 208
>tr|A9T9T5|A9T9T5_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_142345 PE=4 SV=1 Length = 168
Score = 58.5 bits (140), Expect = 2e-07 Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 1/121 (0%) Frame = -2
Query: 515 LNLQVSIYNPNKASFIVQDGGFACLYYYGAQVDFNPVPTGSIPAESFSTISIPLTVQGSA 336 L++ ++++NPN+A + + ++Y QV +P G + A T + L VQ Sbjct: 42 LDMNLTVHNPNRADYKYSNSS-TIVFYQQIQVGHADIPAGQLGAGKTKTQIVTLNVQADK 100
Query: 335 PLQGTYLQGD-VADGILQVSTSVTIIGKVTTLNLFTHHADVVSKCNVDVSFNARGIQSYT 159 L+G+ D V+ GI+ VS + + G+V LN++ H S CN+ V + + S+ Sbjct: 101 FLEGSNFTKDFVSAGIIPVSATTRVRGEVNVLNIYKGHGVSYSWCNMSVFIVNQTLASFH 160
Query: 158 C 156 C Sbjct: 161 C 161
|