BP916311 |
Clone id |
YMU001_000086_C04 |
Library |
YMU01 |
Length |
485 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000086_C04. |
Accession |
BP916311 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1962Contig1 |
Sequence |
CCCTGCTCAATTTCTGCAACCTGACTAAACATAGACAAATCCAGGAAAGCCCAAATTTGA CACTTGGCCATAACTAGCCCCTCTCAAATACCGCAACTTGCATAGCTGCACACATTCAAT TCATGAACCCCTTCAAAACTGCTCTGCATGTACGCAGAATCGGTCTCACAAAGCATGGCA TACTCAAATGCATTGCTAGGATCCAATCGCGAAAGTTCCTTGAAGCAGCATCTTCCAAGT CCTCTGTTTCCATATGCTTTACATGCAGTAAGTACCGATACCCATGCAGGGAGAGCAGGG ATACTTGGAACCGTCTGAAGAAGTTCTCCTGCCTCCTCCAATCTCCTAGCACGACCAAGA AGATCGACCAAAGTGTTGAAATGCTCAATAGTTAGGGGCGTATCATATTCCTTATCCATG GACTTGAAATATGTGTATCCTTCATCTGCAAGACCTGCTTGACTGCATGCTGCCAGGATA CTTGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9LNU6 |
Definition |
sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana |
Align length |
105 |
Score (bit) |
89.0 |
E-value |
1.0e-17 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7NVQ5 |
Definition |
tr|A7NVQ5|A7NVQ5_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
111 |
Score (bit) |
94.4 |
E-value |
3.0e-18 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916311|Adiantum capillus-veneris mRNA, clone: YMU001_000086_C04. (485 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7NVQ5|A7NVQ5_VITVI Chromosome chr18 scaffold_1, whole genome... 94 3e-18 tr|A5AJY4|A5AJY4_VITVI Putative uncharacterized protein OS=Vitis... 94 3e-18 tr|Q7XSV8|Q7XSV8_ORYSJ Os04g0110500 protein OS=Oryza sativa subs... 93 7e-18 tr|Q25AD3|Q25AD3_ORYSA H0201G08.10 protein OS=Oryza sativa GN=H0... 93 7e-18 tr|A7PP85|A7PP85_VITVI Chromosome chr8 scaffold_23, whole genome... 92 1e-17 tr|A5BVN8|A5BVN8_VITVI Putative uncharacterized protein OS=Vitis... 92 1e-17 tr|A2XPN5|A2XPN5_ORYSI Putative uncharacterized protein OS=Oryza... 92 1e-17 tr|A7PEX5|A7PEX5_VITVI Chromosome chr11 scaffold_13, whole genom... 91 4e-17 tr|A7PS78|A7PS78_VITVI Chromosome chr14 scaffold_27, whole genom... 90 5e-17 tr|A7PPE3|A7PPE3_VITVI Chromosome chr8 scaffold_23, whole genome... 89 1e-16 tr|A7PA17|A7PA17_VITVI Chromosome chr14 scaffold_9, whole genome... 89 1e-16 tr|A5AR18|A5AR18_VITVI Putative uncharacterized protein OS=Vitis... 89 1e-16 tr|A2Q4J6|A2Q4J6_MEDTR Tetratricopeptide-like helical OS=Medicag... 89 1e-16 tr|Q2HUK9|Q2HUK9_MEDTR Tetratricopeptide-like helical OS=Medicag... 88 2e-16 tr|A5C6H0|A5C6H0_VITVI Putative uncharacterized protein OS=Vitis... 88 2e-16 tr|Q5W963|Q5W963_PHYPA PPR1106-17 OS=Physcomitrella patens PE=2 ... 88 2e-16 tr|A9T5P5|A9T5P5_PHYPA Predicted protein OS=Physcomitrella paten... 88 2e-16 tr|A7QIJ2|A7QIJ2_VITVI Chromosome chr9 scaffold_104, whole genom... 88 2e-16 tr|A7Q1A2|A7Q1A2_VITVI Chromosome chr10 scaffold_43, whole genom... 88 2e-16 tr|A7PNA8|A7PNA8_VITVI Chromosome chr1 scaffold_22, whole genome... 87 3e-16 tr|B8LQA8|B8LQA8_PICSI Putative uncharacterized protein OS=Picea... 87 4e-16 tr|A7Q306|A7Q306_VITVI Chromosome chr12 scaffold_47, whole genom... 87 4e-16 tr|A5AWQ4|A5AWQ4_VITVI Putative uncharacterized protein OS=Vitis... 87 4e-16 tr|A2ZM04|A2ZM04_ORYSI Putative uncharacterized protein OS=Oryza... 87 4e-16 tr|A7PDG9|A7PDG9_VITVI Chromosome chr17 scaffold_12, whole genom... 87 5e-16 tr|Q9FU66|Q9FU66_ORYSJ Putative uncharacterized protein P0013F10... 86 7e-16 tr|Q8LQE8|Q8LQE8_ORYSJ Pentatricopeptide (PPR) repeat-containing... 86 7e-16 tr|Q1SN04|Q1SN04_MEDTR Tetratricopeptide-like helical OS=Medicag... 86 7e-16 tr|A7PZB8|A7PZB8_VITVI Chromosome chr15 scaffold_40, whole genom... 86 7e-16 tr|A5C8U0|A5C8U0_VITVI Putative uncharacterized protein OS=Vitis... 86 7e-16
>tr|A7NVQ5|A7NVQ5_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00015527001 PE=4 SV=1 Length = 637
Score = 94.4 bits (233), Expect = 3e-18 Identities = 47/111 (42%), Positives = 72/111 (64%) Frame = -1
Query: 485 TSILAACSQAGLADEGYTYFKSMDKEYDTPLTIEHFNTLVDLLGRARRLEEAGELLQTVP 306 T +L+ACS +GL +EG YF+ M + Y ++H++ +VDLLGR+ RLE+A EL++++P Sbjct: 370 THLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMP 429
Query: 305 SIPALPAWVSVLTACKAYGNRGLGRCCFKELSRLDPSNAFEYAMLCETDSA 153 P+ W ++L AC+ YGN LG+ ++L LDPS+ Y ML SA Sbjct: 430 MEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSA 480
Score = 33.9 bits (76), Expect = 4.1 Identities = 27/122 (22%), Positives = 56/122 (45%), Gaps = 2/122 (1%) Frame = -1
Query: 482 SILAACSQAGLADEGYTYFKSMDKEYDTPLTIEHFNTLVDLLGRARRLEEAGELLQTVPS 303 S+++AC+ G DEG + + K + N+L+++ G+ L+ A +L + +P Sbjct: 169 SVVSACADMGALDEGKSLHGVVVK-LGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMP- 226
Query: 302 IPALPAWVS--VLTACKAYGNRGLGRCCFKELSRLDPSNAFEYAMLCETDSAYMQSSFEG 129 + +L +W S V+ Y +G+ + + ++P A A+L + E Sbjct: 227 VRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAES 286
Query: 128 VH 123 +H Sbjct: 287 IH 288
>tr|A5AJY4|A5AJY4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031840 PE=4 SV=1 Length = 714
Score = 94.4 bits (233), Expect = 3e-18 Identities = 47/111 (42%), Positives = 72/111 (64%) Frame = -1
Query: 485 TSILAACSQAGLADEGYTYFKSMDKEYDTPLTIEHFNTLVDLLGRARRLEEAGELLQTVP 306 T +L+ACS +GL +EG YF+ M + Y ++H++ +VDLLGR+ RLE+A EL++++P Sbjct: 447 THLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMP 506
Query: 305 SIPALPAWVSVLTACKAYGNRGLGRCCFKELSRLDPSNAFEYAMLCETDSA 153 P+ W ++L AC+ YGN LG+ ++L LDPS+ Y ML SA Sbjct: 507 MEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSA 557
Score = 33.5 bits (75), Expect = 5.3 Identities = 27/122 (22%), Positives = 56/122 (45%), Gaps = 2/122 (1%) Frame = -1
Query: 482 SILAACSQAGLADEGYTYFKSMDKEYDTPLTIEHFNTLVDLLGRARRLEEAGELLQTVPS 303 S+++AC+ G DEG + + K + N+L+++ G+ L+ A +L + +P Sbjct: 246 SVVSACAXMGALDEGKSLHGVVVK-LGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMP- 303
Query: 302 IPALPAWVS--VLTACKAYGNRGLGRCCFKELSRLDPSNAFEYAMLCETDSAYMQSSFEG 129 + +L +W S V+ Y +G+ + + ++P A A+L + E Sbjct: 304 VRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAES 363
Query: 128 VH 123 +H Sbjct: 364 IH 365
>tr|Q7XSV8|Q7XSV8_ORYSJ Os04g0110500 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0027H06.17 PE=2 SV=2 Length = 531
Score = 92.8 bits (229), Expect = 7e-18 Identities = 44/103 (42%), Positives = 65/103 (63%) Frame = -1
Query: 479 ILAACSQAGLADEGYTYFKSMDKEYDTPLTIEHFNTLVDLLGRARRLEEAGELLQTVPSI 300 +L AC+ GL DEG YF SM+ ++ IEH+ ++DLLGR RL+EA +++T+P Sbjct: 359 VLNACAHGGLVDEGLGYFYSMEAKFRITPKIEHYGCMIDLLGRVGRLQEAYSMIRTMPMD 418
Query: 299 PALPAWVSVLTACKAYGNRGLGRCCFKELSRLDPSNAFEYAML 171 P W + L+ACK +GN LG+ +EL+RLDP + + ML Sbjct: 419 PNTVIWGAFLSACKVHGNMELGKIAAEELTRLDPDDPWGRVML 461
>tr|Q25AD3|Q25AD3_ORYSA H0201G08.10 protein OS=Oryza sativa GN=H0201G08.10 PE=4 SV=1 Length = 530
Score = 92.8 bits (229), Expect = 7e-18 Identities = 44/103 (42%), Positives = 65/103 (63%) Frame = -1
Query: 479 ILAACSQAGLADEGYTYFKSMDKEYDTPLTIEHFNTLVDLLGRARRLEEAGELLQTVPSI 300 +L AC+ GL DEG YF SM+ ++ IEH+ ++DLLGR RL+EA +++T+P Sbjct: 358 VLNACAHGGLVDEGLGYFYSMEAKFRITPKIEHYGCMIDLLGRVGRLQEAYSMIRTMPMD 417
Query: 299 PALPAWVSVLTACKAYGNRGLGRCCFKELSRLDPSNAFEYAML 171 P W + L+ACK +GN LG+ +EL+RLDP + + ML Sbjct: 418 PNTVIWGAFLSACKVHGNMELGKIAAEELTRLDPDDPWGRVML 460
>tr|A7PP85|A7PP85_VITVI Chromosome chr8 scaffold_23, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00021552001 PE=4 SV=1 Length = 561
Score = 92.4 bits (228), Expect = 1e-17 Identities = 51/114 (44%), Positives = 70/114 (61%) Frame = -1
Query: 485 TSILAACSQAGLADEGYTYFKSMDKEYDTPLTIEHFNTLVDLLGRARRLEEAGELLQTVP 306 T IL ACS+AGL DEG YF+SM +Y + +H+ +VDLLGRA RL+EA ELL+++P Sbjct: 423 TVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMP 482
Query: 305 SIPALPAWVSVLTACKAYGNRGLGRCCFKELSRLDPSNAFEYAMLCETDSAYMQ 144 P AW ++L ACK + + LG +L L+P NA Y +L +A Q Sbjct: 483 VEPHAGAWGALLGACKLHCDIELGEVVADQLFELEPQNAGNYVLLSNIYAAAEQ 536
>tr|A5BVN8|A5BVN8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017037 PE=4 SV=1 Length = 546
Score = 92.4 bits (228), Expect = 1e-17 Identities = 51/114 (44%), Positives = 70/114 (61%) Frame = -1
Query: 485 TSILAACSQAGLADEGYTYFKSMDKEYDTPLTIEHFNTLVDLLGRARRLEEAGELLQTVP 306 T IL ACS+AGL DEG YF+SM +Y + +H+ +VDLLGRA RL+EA ELL+++P Sbjct: 408 TVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMP 467
Query: 305 SIPALPAWVSVLTACKAYGNRGLGRCCFKELSRLDPSNAFEYAMLCETDSAYMQ 144 P AW ++L ACK + + LG +L L+P NA Y +L +A Q Sbjct: 468 VEPHAGAWGALLGACKLHCDIELGEVVADQLFELEPQNAGNYVLLSNIYAAAEQ 521
>tr|A2XPN5|A2XPN5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_14599 PE=4 SV=1 Length = 530
Score = 92.4 bits (228), Expect = 1e-17 Identities = 44/103 (42%), Positives = 65/103 (63%) Frame = -1
Query: 479 ILAACSQAGLADEGYTYFKSMDKEYDTPLTIEHFNTLVDLLGRARRLEEAGELLQTVPSI 300 +L AC+ GL DEG YF SM+ ++ IEH+ ++DLLGR RL+EA +++T+P Sbjct: 358 VLNACAHGGLVDEGLGYFYSMEAKFRITPKIEHYGCMIDLLGRIGRLQEAYSMIRTMPMD 417
Query: 299 PALPAWVSVLTACKAYGNRGLGRCCFKELSRLDPSNAFEYAML 171 P W + L+ACK +GN LG+ +EL+RLDP + + ML Sbjct: 418 PNTVIWGAFLSACKVHGNMELGKIAAEELTRLDPDDPWGRVML 460
>tr|A7PEX5|A7PEX5_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016825001 PE=4 SV=1 Length = 711
Score = 90.5 bits (223), Expect = 4e-17 Identities = 44/103 (42%), Positives = 63/103 (61%) Frame = -1
Query: 479 ILAACSQAGLADEGYTYFKSMDKEYDTPLTIEHFNTLVDLLGRARRLEEAGELLQTVPSI 300 +LAACS AGL +EG YF SM +Y +IEH+ +VD+LGRA R+ EA +L+Q +P Sbjct: 446 VLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMA 505
Query: 299 PALPAWVSVLTACKAYGNRGLGRCCFKELSRLDPSNAFEYAML 171 P V +L+AC+ +GN + ++L LDP N Y +L Sbjct: 506 PDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLL 548
>tr|A7PS78|A7PS78_VITVI Chromosome chr14 scaffold_27, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022798001 PE=4 SV=1 Length = 610
Score = 90.1 bits (222), Expect = 5e-17 Identities = 44/104 (42%), Positives = 65/104 (62%) Frame = -1
Query: 482 SILAACSQAGLADEGYTYFKSMDKEYDTPLTIEHFNTLVDLLGRARRLEEAGELLQTVPS 303 ++L+ CS AGLAD+G F+ M +Y T+EH+ LVD+LGRA R++EA E+++ +P Sbjct: 343 ALLSGCSHAGLADDGCRLFEMMKMDYGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPF 402
Query: 302 IPALPAWVSVLTACKAYGNRGLGRCCFKELSRLDPSNAFEYAML 171 P W S+L +C+ +GN L K L L+P+NA Y ML Sbjct: 403 KPTGSIWGSLLNSCRLHGNVPLAEAVAKRLFELEPNNAGNYVML 446
>tr|A7PPE3|A7PPE3_VITVI Chromosome chr8 scaffold_23, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00021620001 PE=4 SV=1 Length = 681
Score = 89.0 bits (219), Expect = 1e-16 Identities = 43/104 (41%), Positives = 64/104 (61%) Frame = -1
Query: 482 SILAACSQAGLADEGYTYFKSMDKEYDTPLTIEHFNTLVDLLGRARRLEEAGELLQTVPS 303 S+L CS AGL +EG YF SMDK Y EH++ ++DLLGRA RL+EA E + +P Sbjct: 415 SLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPF 474
Query: 302 IPALPAWVSVLTACKAYGNRGLGRCCFKELSRLDPSNAFEYAML 171 P W S L AC+ +G++ +G+ ++L +L+P N+ +L Sbjct: 475 EPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLL 518
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