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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916312
Clone id YMU001_000086_C05
Library
Length 314
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000086_C05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GAGAGTTGCAGAACTTGCAAAAAGCTGAGGCAGAGGTCGATATGCTTGGGGATGAAGTTG
ATTCACTTCTGGTTATTTTGGAGGAAGTCCAAGTCACATTTGATTTGTATGCACCAGTAC
TTGTACATTATCCAAAGATGACTGAGATGGCAAAAATCGTAAAACAGGAGGTCCAATTGC
GAATAGATCCCAAGTATGGGGCTTGAGCAAAAGGTAGTGTGAGATACAGAGATCAGCCTT
GTAAATCCGTGTCTTGTGAGTGATAGGAGAAATTAGCTAGGTGCATTTTGTGGAAAATTG
TCTTGTACATGCTG
■■Homology search results ■■ -
sp_hit_id O64584
Definition sp|O64584|WAP_ARATH WPP domain-associated protein OS=Arabidopsis thaliana
Align length 54
Score (bit) 64.7
E-value 1.0e-10
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916312|Adiantum capillus-veneris mRNA, clone:
YMU001_000086_C05.
         (314 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O64584|WAP_ARATH WPP domain-associated protein OS=Arabidopsis...    65   1e-10
sp|Q5BQN5|WAP_SOLLC WPP domain-associated protein (Fragment) OS=...    55   8e-08
sp|Q24185|HOOK_DROME Protein hook OS=Drosophila melanogaster GN=...    32   0.98 
sp|Q7SB92|CHS7_NEUCR Chitin synthase export chaperone OS=Neurosp...    31   2.2  
sp|Q97WH0|RAD50_SULSO DNA double-strand break repair rad50 ATPas...    30   3.7  
sp|A4QL79|YCF1_DRANE Putative membrane protein ycf1 OS=Draba nem...    30   4.9  
sp|Q3ZZA1|NRDR_DEHSC Transcriptional repressor nrdR OS=Dehalococ...    29   8.3  
sp|A5FSC0|NRDR_DEHSB Transcriptional repressor nrdR OS=Dehalococ...    29   8.3  

>sp|O64584|WAP_ARATH WPP domain-associated protein OS=Arabidopsis
           thaliana GN=WAP PE=1 SV=2
          Length = 825

 Score = 64.7 bits (156), Expect = 1e-10
 Identities = 27/54 (50%), Positives = 45/54 (83%)
 Frame = +3

Query: 12  NLQKAEAEVDMLGDEVDSLLVILEEVQVTFDLYAPVLVHYPKMTEMAKIVKQEV 173
           +L+KAEAEVD+LGDEV++LL +LE++ +  D Y+P+L HYP + E+ ++V++E+
Sbjct: 763 DLKKAEAEVDLLGDEVETLLDLLEKIYIALDHYSPILKHYPGIIEILRLVRREL 816


>sp|Q5BQN5|WAP_SOLLC WPP domain-associated protein (Fragment)
           OS=Solanum lycopersicum GN=WAP PE=1 SV=1
          Length = 834

 Score = 55.5 bits (132), Expect = 8e-08
 Identities = 24/41 (58%), Positives = 34/41 (82%)
 Frame = +3

Query: 12  NLQKAEAEVDMLGDEVDSLLVILEEVQVTFDLYAPVLVHYP 134
           +L+ AEAEVD+LGDEVD+LL ++E++ +  D Y+PVL HYP
Sbjct: 788 DLKLAEAEVDLLGDEVDTLLSLVEKIYIALDHYSPVLQHYP 828


>sp|Q24185|HOOK_DROME Protein hook OS=Drosophila melanogaster GN=hk
           PE=1 SV=2
          Length = 679

 Score = 32.0 bits (71), Expect = 0.98
 Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 11/83 (13%)
 Frame = +3

Query: 6   LQNLQKAEAEVDMLGDEVDSLLVILEEVQV---TFDLYAPVLVHYPKMTEMAKI------ 158
           ++ L K+ AEV  L DEVD L    +++++     D Y   L  Y  + +  KI      
Sbjct: 293 IEELMKSSAEVTTLKDEVDVLRESNDKLKICEAQLDTYKKKLEDYNDLKKQVKILEERSA 352

Query: 159 --VKQEVQLRIDPKYGA*AKGSV 221
             V+Q  Q   D K  A  KG V
Sbjct: 353 DYVQQNAQFEEDAKRYANTKGQV 375


>sp|Q7SB92|CHS7_NEUCR Chitin synthase export chaperone OS=Neurospora
           crassa GN=chs-7 PE=3 SV=1
          Length = 358

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = -1

Query: 206 SSPIL-GIYSQLDLLFY-DFCHLSHLWIMYKYWCIQIKCDLDF 84
           SSPI  GI   LD LF+   C+L  + ++YKYW    K DL+F
Sbjct: 241 SSPICEGISHYLDGLFFATTCNLLAVMMVYKYWDSITKEDLEF 283


>sp|Q97WH0|RAD50_SULSO DNA double-strand break repair rad50 ATPase
           OS=Sulfolobus solfataricus GN=rad50 PE=3 SV=1
          Length = 864

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 14/56 (25%), Positives = 32/56 (57%)
 Frame = +3

Query: 6   LQNLQKAEAEVDMLGDEVDSLLVILEEVQVTFDLYAPVLVHYPKMTEMAKIVKQEV 173
           ++ L+K   E++ L  E++SL  I EE++   +    + ++Y +   ++K  K+E+
Sbjct: 491 MRQLKKLNEEIENLHSEIESLKNIDEEIKKINEEVKELKLYYEEFMRLSKYTKEEL 546


>sp|A4QL79|YCF1_DRANE Putative membrane protein ycf1 OS=Draba nemorosa
            GN=ycf1-A PE=3 SV=1
          Length = 1780

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -1

Query: 221  HTTFCSSPILGIYSQLDLLFYDFCHLSHLWIMYKYWCIQI 102
            +T F  S I  + S+  +  YD C LS  ++ YK   IQ+
Sbjct: 1140 NTIFFISTIKNLISKKKIFSYDLCSLSQAYVFYKLSQIQV 1179


>sp|Q3ZZA1|NRDR_DEHSC Transcriptional repressor nrdR
           OS=Dehalococcoides sp. (strain CBDB1) GN=nrdR PE=3 SV=1
          Length = 175

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +3

Query: 3   ELQNLQKAEAEVDMLGDEVDSLLVILEEVQVTFDLYAPVLVHYPKMTEMAKIV 161
           EL N+ KAE    +LGD V   L +L+   + +  +A V   +  +T++ K+V
Sbjct: 92  ELYNMGKAEIPSTLLGDMVMERLKMLD--NIAYVRFASVYREFTDITQLKKVV 142


>sp|A5FSC0|NRDR_DEHSB Transcriptional repressor nrdR
           OS=Dehalococcoides sp. (strain BAV1) GN=nrdR PE=3 SV=1
          Length = 175

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +3

Query: 3   ELQNLQKAEAEVDMLGDEVDSLLVILEEVQVTFDLYAPVLVHYPKMTEMAKIV 161
           EL N+ KAE    +LGD V   L +L+   + +  +A V   +  +T++ K+V
Sbjct: 92  ELYNMGKAEIPSTLLGDMVMERLKMLD--NIAYVRFASVYREFTDITQLKKVV 142
tr_hit_id A7Q4M3
Definition tr|A7Q4M3|A7Q4M3_VITVI Chromosome chr10 scaffold_50, whole genome shotgun sequence OS=Vitis vinifera
Align length 54
Score (bit) 67.8
E-value 3.0e-10
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916312|Adiantum capillus-veneris mRNA, clone:
YMU001_000086_C05.
         (314 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7Q4M3|A7Q4M3_VITVI Chromosome chr10 scaffold_50, whole genom...    68   3e-10
tr|Q2QMA1|Q2QMA1_ORYSJ Os12g0612300 protein OS=Oryza sativa subs...    67   3e-10
tr|A9NST4|A9NST4_PICSI Putative uncharacterized protein OS=Picea...    67   4e-10
tr|B8BMZ3|B8BMZ3_ORYSI Putative uncharacterized protein OS=Oryza...    60   4e-08
tr|Q7XP68|Q7XP68_ORYSJ Os04g0521600 protein OS=Oryza sativa subs...    58   3e-07
tr|Q01IB3|Q01IB3_ORYSA OSIGBa0131L05.8 protein OS=Oryza sativa G...    58   3e-07
tr|A2XVL7|A2XVL7_ORYSI Putative uncharacterized protein OS=Oryza...    58   3e-07
tr|Q6K437|Q6K437_ORYSJ Os09g0133800 protein OS=Oryza sativa subs...    55   1e-06
tr|A2YYQ1|A2YYQ1_ORYSI Putative uncharacterized protein OS=Oryza...    55   1e-06
tr|A7PI49|A7PI49_VITVI Chromosome chr13 scaffold_17, whole genom...    54   5e-06
tr|B4FH34|B4FH34_MAIZE Putative uncharacterized protein OS=Zea m...    51   3e-05
tr|Q9LFQ6|Q9LFQ6_ARATH Putative uncharacterized protein F2G14_11...    50   6e-05
tr|A3AVM6|A3AVM6_ORYSJ Putative uncharacterized protein OS=Oryza...    47   4e-04
tr|Q94GH4|Q94GH4_ORYSA Putative myosin heavy chain OS=Oryza sati...    47   5e-04
tr|Q6ZF68|Q6ZF68_ORYSJ Putative myosin heavy chain OS=Oryza sati...    47   5e-04
tr|Q10CF6|Q10CF6_ORYSJ Expressed protein OS=Oryza sativa subsp. ...    47   5e-04
tr|Q0DN00|Q0DN00_ORYSJ Os03g0784500 protein (Fragment) OS=Oryza ...    47   5e-04
tr|B8AKX0|B8AKX0_ORYSI Putative uncharacterized protein OS=Oryza...    47   5e-04
tr|A3ANC8|A3ANC8_ORYSJ Putative uncharacterized protein OS=Oryza...    47   5e-04
tr|Q0D8M0|Q0D8M0_ORYSJ Os07g0147800 protein OS=Oryza sativa subs...    40   0.076
tr|A3BGK5|A3BGK5_ORYSJ Putative uncharacterized protein OS=Oryza...    40   0.076
tr|A2YI61|A2YI61_ORYSI Putative uncharacterized protein OS=Oryza...    40   0.076
tr|B4F900|B4F900_MAIZE Putative uncharacterized protein OS=Zea m...    39   0.13 
tr|Q4E726|Q4E726_9RICK Putative uncharacterized protein (Fragmen...    35   2.5  
tr|Q1VZN2|Q1VZN2_9FLAO Putative uncharacterized protein OS=Psych...    33   5.5  
tr|Q7WRX9|Q7WRX9_9NOST Peptide sythetase (Peptide synthetase) OS...    33   7.1  

>tr|A7Q4M3|A7Q4M3_VITVI Chromosome chr10 scaffold_50, whole genome
            shotgun sequence OS=Vitis vinifera GN=GSVIVT00029749001
            PE=4 SV=1
          Length = 943

 Score = 67.8 bits (164), Expect = 3e-10
 Identities = 29/54 (53%), Positives = 44/54 (81%)
 Frame = +3

Query: 12   NLQKAEAEVDMLGDEVDSLLVILEEVQVTFDLYAPVLVHYPKMTEMAKIVKQEV 173
            +LQKAE EVD+LGDEVD+LL +LE++ +  D Y+P+L HYP + E+ K+V++E+
Sbjct: 882  DLQKAETEVDLLGDEVDALLSLLEKIYIALDHYSPILQHYPGVIEILKLVRREL 935


>tr|Q2QMA1|Q2QMA1_ORYSJ Os12g0612300 protein OS=Oryza sativa subsp.
           japonica GN=Os12g0612300 PE=4 SV=1
          Length = 579

 Score = 67.4 bits (163), Expect = 3e-10
 Identities = 31/55 (56%), Positives = 44/55 (80%)
 Frame = +3

Query: 12  NLQKAEAEVDMLGDEVDSLLVILEEVQVTFDLYAPVLVHYPKMTEMAKIVKQEVQ 176
           NLQKAEAEVD+LGDEVD+LL IL ++ +  D Y+PVL HYP +TE+  +V++ ++
Sbjct: 521 NLQKAEAEVDILGDEVDALLSILGKIYIALDHYSPVLKHYPGVTEILNLVQKALK 575


>tr|A9NST4|A9NST4_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 236

 Score = 67.0 bits (162), Expect = 4e-10
 Identities = 29/60 (48%), Positives = 45/60 (75%)
 Frame = +3

Query: 9   QNLQKAEAEVDMLGDEVDSLLVILEEVQVTFDLYAPVLVHYPKMTEMAKIVKQEVQLRID 188
           +NLQKAE EVD+LGDEVDS+L +L +V +  + YAP+L HYP + ++  ++K+E+   +D
Sbjct: 169 RNLQKAEEEVDLLGDEVDSVLSLLGKVYIVLNHYAPILQHYPGIPDVVNLIKKEIAGHVD 228


>tr|B8BMZ3|B8BMZ3_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_39091 PE=4 SV=1
          Length = 918

 Score = 60.5 bits (145), Expect = 4e-08
 Identities = 28/41 (68%), Positives = 34/41 (82%)
 Frame = +3

Query: 12  NLQKAEAEVDMLGDEVDSLLVILEEVQVTFDLYAPVLVHYP 134
           NLQKAEAEVD+LGDEVD+LL IL ++ +  D Y+PVL HYP
Sbjct: 521 NLQKAEAEVDILGDEVDALLSILGKIYIALDHYSPVLKHYP 561


>tr|Q7XP68|Q7XP68_ORYSJ Os04g0521600 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0019D11.17 PE=4 SV=1
          Length = 771

 Score = 57.8 bits (138), Expect = 3e-07
 Identities = 29/57 (50%), Positives = 40/57 (70%)
 Frame = +3

Query: 12  NLQKAEAEVDMLGDEVDSLLVILEEVQVTFDLYAPVLVHYPKMTEMAKIVKQEVQLR 182
           +LQ AEAEVD+LGDEV+ LL +L +     D Y+PVL HY  + EM K++ +E+ LR
Sbjct: 712 DLQTAEAEVDLLGDEVELLLGLLRKTYKALDRYSPVLEHYLGVREMLKLLGKELALR 768


>tr|Q01IB3|Q01IB3_ORYSA OSIGBa0131L05.8 protein OS=Oryza sativa
           GN=OSIGBa0131L05.8 PE=4 SV=1
          Length = 771

 Score = 57.8 bits (138), Expect = 3e-07
 Identities = 29/57 (50%), Positives = 40/57 (70%)
 Frame = +3

Query: 12  NLQKAEAEVDMLGDEVDSLLVILEEVQVTFDLYAPVLVHYPKMTEMAKIVKQEVQLR 182
           +LQ AEAEVD+LGDEV+ LL +L +     D Y+PVL HY  + EM K++ +E+ LR
Sbjct: 712 DLQTAEAEVDLLGDEVELLLGLLRKTYKALDRYSPVLEHYLGVREMLKLLGKELALR 768


>tr|A2XVL7|A2XVL7_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_16677 PE=4 SV=1
          Length = 771

 Score = 57.8 bits (138), Expect = 3e-07
 Identities = 29/57 (50%), Positives = 40/57 (70%)
 Frame = +3

Query: 12  NLQKAEAEVDMLGDEVDSLLVILEEVQVTFDLYAPVLVHYPKMTEMAKIVKQEVQLR 182
           +LQ AEAEVD+LGDEV+ LL +L +     D Y+PVL HY  + EM K++ +E+ LR
Sbjct: 712 DLQTAEAEVDLLGDEVELLLGLLRKTYKALDRYSPVLEHYLGVREMLKLLGKELALR 768


>tr|Q6K437|Q6K437_ORYSJ Os09g0133800 protein OS=Oryza sativa subsp.
           japonica GN=P0406E03.34-1 PE=2 SV=1
          Length = 661

 Score = 55.5 bits (132), Expect = 1e-06
 Identities = 24/56 (42%), Positives = 40/56 (71%)
 Frame = +3

Query: 12  NLQKAEAEVDMLGDEVDSLLVILEEVQVTFDLYAPVLVHYPKMTEMAKIVKQEVQL 179
           NLQKAE EVD+LGDEV++L  +L ++ +  D Y+PVL +Y  + E+  ++K+ + +
Sbjct: 604 NLQKAELEVDLLGDEVEALTDLLAKIYIALDHYSPVLQYYTGVMEILNMIKKHLNM 659


>tr|A2YYQ1|A2YYQ1_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_30471 PE=4 SV=1
          Length = 661

 Score = 55.5 bits (132), Expect = 1e-06
 Identities = 24/56 (42%), Positives = 40/56 (71%)
 Frame = +3

Query: 12  NLQKAEAEVDMLGDEVDSLLVILEEVQVTFDLYAPVLVHYPKMTEMAKIVKQEVQL 179
           NLQKAE EVD+LGDEV++L  +L ++ +  D Y+PVL +Y  + E+  ++K+ + +
Sbjct: 604 NLQKAELEVDLLGDEVEALTDLLAKIYIALDHYSPVLQYYTGVMEILNMIKKHLNM 659


>tr|A7PI49|A7PI49_VITVI Chromosome chr13 scaffold_17, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00018194001
           PE=4 SV=1
          Length = 711

 Score = 53.5 bits (127), Expect = 5e-06
 Identities = 25/40 (62%), Positives = 31/40 (77%)
 Frame = +3

Query: 12  NLQKAEAEVDMLGDEVDSLLVILEEVQVTFDLYAPVLVHY 131
           NLQKAE EVD+LGD+VD LL +LE + +T D Y+PVL  Y
Sbjct: 618 NLQKAEIEVDLLGDQVDVLLGLLERIYLTLDRYSPVLQQY 657