BP916314 |
Clone id |
YMU001_000086_C07 |
Library |
YMU01 |
Length |
522 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000086_C07. |
Accession |
BP916314 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL4088Contig1 |
Sequence |
AGGCAATGTCTTCTTCTTTGCTCCGAGAGTTTGAACGTTACAAGCTGGCATCTTGGATAA AGCTATAAGACCGCCAGCTACACCCATCAATTTGGCTGCTACTGCGGTCCCTACAATTGC AGAAAGATTTGGTGCAATGTAGCCCATTCTACTCTCCACAAAATCCAGCACTTTCTTTTA TGCATCATCAAGGGCTAAAGCCCTGTCACAAGCCTCCAAAGTCTTTTGCAAATTCTCTTC GGACAGGGGTTTCCCAGTAGTTGTTGATGCTGTGACAGAAACAACCATGATCGTAGCCGA TAGAAGTAACCCCTCAAGGTCCACAAGAGTAAGGTCCATCTCATTGCCGATTTTCTTAAC AACTCTAGCATAATCAATGGGGCGGAGTACGAGAGACTCCAACTCTGGGAATTTCAATCT ATACCTGTCCCTGATAAAGTTGTGAATGATAATTATCTCGTTCTCTATATCAGCTGACAA CGTGTTGCAGTCCACGATGAGCTCATATTCGGGATCATCCTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8WWY3 |
Definition |
sp|Q8WWY3|PRP31_HUMAN U4/U6 small nuclear ribonucleoprotein Prp31 OS=Homo sapiens |
Align length |
175 |
Score (bit) |
151.0 |
E-value |
2.0e-36 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9T271 |
Definition |
tr|A9T271|A9T271_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
173 |
Score (bit) |
212.0 |
E-value |
8.0e-54 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916314|Adiantum capillus-veneris mRNA, clone: YMU001_000086_C07. (522 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9T271|A9T271_PHYPA Predicted protein OS=Physcomitrella paten... 212 8e-54 tr|A7Q2D9|A7Q2D9_VITVI Chromosome chr1 scaffold_46, whole genome... 209 5e-53 tr|B4FHA5|B4FHA5_MAIZE Putative uncharacterized protein OS=Zea m... 206 4e-52 tr|B7ZZV0|B7ZZV0_MAIZE Putative uncharacterized protein OS=Zea m... 206 7e-52 tr|A2Q2G1|A2Q2G1_MEDTR Pre-mRNA processing ribonucleoprotein, bi... 205 1e-51 tr|Q7XU07|Q7XU07_ORYSJ Os04g0555400 protein OS=Oryza sativa subs... 204 2e-51 tr|B8ASV6|B8ASV6_ORYSI Putative uncharacterized protein OS=Oryza... 204 2e-51 tr|A3AWA0|A3AWA0_ORYSJ Putative uncharacterized protein OS=Oryza... 204 2e-51 tr|Q8H4L0|Q8H4L0_ORYSJ Os07g0141600 protein OS=Oryza sativa subs... 196 5e-49 tr|A2YI25|A2YI25_ORYSI Putative uncharacterized protein OS=Oryza... 196 5e-49 tr|A8IC90|A8IC90_CHLRE Pre-mRNA-splicing factor OS=Chlamydomonas... 179 1e-43 tr|Q8RXN6|Q8RXN6_ARATH Putative uncharacterized protein At1g6017... 177 2e-43 tr|O80740|O80740_ARATH T13D8.6 protein OS=Arabidopsis thaliana G... 177 2e-43 tr|A4RVQ7|A4RVQ7_OSTLU Predicted protein OS=Ostreococcus lucimar... 166 9e-40 tr|Q01E93|Q01E93_OSTTA PrpF31 U4/U6*U5 snRNP-associated pre-mRNA... 158 2e-37 tr|B2KIL8|B2KIL8_RHIFE U4/U6 small nuclear ribonucleoprotein Prp... 151 2e-35 tr|B1MTX8|B1MTX8_CALMO PRP31 pre-mRNA processing factor 31 homol... 151 2e-35 tr|B0VXI2|B0VXI2_CALJA PRP31 pre-mRNA processing factor 31 homol... 151 2e-35 tr|A9L907|A9L907_PAPAN PRP31 pre-mRNA processing factor 31 homol... 151 2e-35 tr|B4DWW8|B4DWW8_HUMAN cDNA FLJ59251, highly similar to U4/U6 sm... 150 3e-35 tr|A7SSP9|A7SSP9_NEMVE Predicted protein OS=Nematostella vectens... 149 8e-35 tr|B3RFF3|B3RFF3_SORAR U4/U6 small nuclear ribonucleoprotein Prp... 149 1e-34 tr|Q7PV98|Q7PV98_ANOGA AGAP012142-PA OS=Anopheles gambiae GN=AGA... 148 2e-34 tr|Q4SN86|Q4SN86_TETNG Chromosome 8 SCAF14543, whole genome shot... 146 5e-34 tr|B7QFR1|B7QFR1_IXOSC U4/U6 small nuclear ribonucleoprotein Prp... 146 5e-34 tr|B6PFA4|B6PFA4_BRAFL Putative uncharacterized protein OS=Branc... 146 5e-34 tr|B6LDA6|B6LDA6_BRAFL Putative uncharacterized protein OS=Branc... 146 7e-34 tr|A9UQ04|A9UQ04_MONBE Predicted protein OS=Monosiga brevicollis... 145 9e-34 tr|Q9M002|Q9M002_ARATH Putative uncharacterized protein T4C21_20... 144 3e-33 tr|B4IZG0|B4IZG0_DROGR GH14529 OS=Drosophila grimshawi GN=GH1452... 143 5e-33
>tr|A9T271|A9T271_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_59230 PE=4 SV=1 Length = 483
Score = 212 bits (540), Expect = 8e-54 Identities = 115/173 (66%), Positives = 125/173 (72%) Frame = -1
Query: 522 EDDPEYELIVDCNTLSADXXXXXXXXXXXIRDRYRLKFPELESLVLRPIDYARVVKKIGN 343 EDDPEY+LIV+CN LS D IRD+YR KFPELESLVL PIDY+R+VK+IGN Sbjct: 87 EDDPEYQLIVECNALSVDIDNEITIIHNFIRDKYRAKFPELESLVLHPIDYSRLVKQIGN 146
Query: 342 EMDXXXXXXXXXXLSATIMVVSVTASTTTGKPLSEENLQKTXXXXXXXXXXXXXXXXXXD 163 EMD SATIMVVSVTASTT+GKPLSEENLQKT + Sbjct: 147 EMDLTLVDLEGLLPSATIMVVSVTASTTSGKPLSEENLQKTIEACDRALALDEAKKKVLE 206
Query: 162 FVESRMGYIAPNLSAIVGTAVAAKLMGVAGGLIALSKMPACNVQTLGAKKKTL 4 FVESRMGYIAPNLSA+VG+ VAAKLMGVAGGL ALSKMPACNVQ LGAKKK L Sbjct: 207 FVESRMGYIAPNLSAVVGSTVAAKLMGVAGGLAALSKMPACNVQILGAKKKNL 259
>tr|A7Q2D9|A7Q2D9_VITVI Chromosome chr1 scaffold_46, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00028845001 PE=4 SV=1 Length = 504
Score = 209 bits (533), Expect = 5e-53 Identities = 117/173 (67%), Positives = 122/173 (70%) Frame = -1
Query: 522 EDDPEYELIVDCNTLSADXXXXXXXXXXXIRDRYRLKFPELESLVLRPIDYARVVKKIGN 343 EDDPEY+LIVDCN LS D IRD YRLKFPELESLV PIDYARVVKKIGN Sbjct: 108 EDDPEYQLIVDCNALSVDIENEIVIIHNFIRDNYRLKFPELESLVHHPIDYARVVKKIGN 167
Query: 342 EMDXXXXXXXXXXLSATIMVVSVTASTTTGKPLSEENLQKTXXXXXXXXXXXXXXXXXXD 163 EMD SA IMVVSVTASTT+GKPL EENL+KT D Sbjct: 168 EMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEENLKKTVDACDRALALDLAKKKVLD 227
Query: 162 FVESRMGYIAPNLSAIVGTAVAAKLMGVAGGLIALSKMPACNVQTLGAKKKTL 4 FVESRMGYIAPNLSAIVG+AVAAKLMG AGGL AL+KMPACNVQ LGAKKK L Sbjct: 228 FVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLTALAKMPACNVQLLGAKKKNL 280
>tr|B4FHA5|B4FHA5_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 485
Score = 206 bits (525), Expect = 4e-52 Identities = 114/173 (65%), Positives = 124/173 (71%) Frame = -1
Query: 522 EDDPEYELIVDCNTLSADXXXXXXXXXXXIRDRYRLKFPELESLVLRPIDYARVVKKIGN 343 E+DPEY+LIVDCN LS D IRD+YRLKFPELESLV PIDYARVVKKIGN Sbjct: 88 EEDPEYQLIVDCNALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGN 147
Query: 342 EMDXXXXXXXXXXLSATIMVVSVTASTTTGKPLSEENLQKTXXXXXXXXXXXXXXXXXXD 163 EMD SA IMVVSVTASTT+GKPLSE+NL+KT D Sbjct: 148 EMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLSEDNLEKTTEACDRALTLDASKKKVLD 207
Query: 162 FVESRMGYIAPNLSAIVGTAVAAKLMGVAGGLIALSKMPACNVQTLGAKKKTL 4 FVESRMGYIAPNLSAIVG+AVA+KLMG AGGL AL+KMPACNVQ LGAK+K L Sbjct: 208 FVESRMGYIAPNLSAIVGSAVASKLMGTAGGLGALAKMPACNVQLLGAKRKNL 260
>tr|B7ZZV0|B7ZZV0_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 485
Score = 206 bits (523), Expect = 7e-52 Identities = 114/173 (65%), Positives = 124/173 (71%) Frame = -1
Query: 522 EDDPEYELIVDCNTLSADXXXXXXXXXXXIRDRYRLKFPELESLVLRPIDYARVVKKIGN 343 E+DPEY+LIVDCN LS D IRD+YRLKFPELESLV PIDYARVVKKIGN Sbjct: 88 EEDPEYQLIVDCNALSVDIENEIIIIHNFIRDKYRLKFPELESLVHLPIDYARVVKKIGN 147
Query: 342 EMDXXXXXXXXXXLSATIMVVSVTASTTTGKPLSEENLQKTXXXXXXXXXXXXXXXXXXD 163 EMD SA IMVVSVTASTT+GKPLSE+NL+KT D Sbjct: 148 EMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLSEDNLEKTTEACDRALTLDASKKKVLD 207
Query: 162 FVESRMGYIAPNLSAIVGTAVAAKLMGVAGGLIALSKMPACNVQTLGAKKKTL 4 FVESRMGYIAPNLSAIVG+AVA+KLMG AGGL AL+KMPACNVQ LGAK+K L Sbjct: 208 FVESRMGYIAPNLSAIVGSAVASKLMGTAGGLGALAKMPACNVQLLGAKRKNL 260
>tr|A2Q2G1|A2Q2G1_MEDTR Pre-mRNA processing ribonucleoprotein, binding region; NOSIC OS=Medicago truncatula GN=MtrDRAFT_AC150800g1v2 PE=4 SV=1 Length = 484
Score = 205 bits (521), Expect = 1e-51 Identities = 115/173 (66%), Positives = 121/173 (69%) Frame = -1
Query: 522 EDDPEYELIVDCNTLSADXXXXXXXXXXXIRDRYRLKFPELESLVLRPIDYARVVKKIGN 343 EDDPEY+LIV+CN LS D IRD+YRLKFPELESLV PIDYARVVKKIGN Sbjct: 88 EDDPEYQLIVECNALSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGN 147
Query: 342 EMDXXXXXXXXXXLSATIMVVSVTASTTTGKPLSEENLQKTXXXXXXXXXXXXXXXXXXD 163 EMD SA IMVVSVTASTTTGKPL EE L KT D Sbjct: 148 EMDLTLVDLEGLLPSAIIMVVSVTASTTTGKPLPEEVLSKTIEACDRALALDSAKKKVLD 207
Query: 162 FVESRMGYIAPNLSAIVGTAVAAKLMGVAGGLIALSKMPACNVQTLGAKKKTL 4 FVESRMGYIAPN+SAIVG+AVAAKLMG AGGL AL+KMPACNVQ LGAKKK L Sbjct: 208 FVESRMGYIAPNVSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNL 260
>tr|Q7XU07|Q7XU07_ORYSJ Os04g0555400 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0012E24.3 PE=2 SV=2 Length = 484
Score = 204 bits (519), Expect = 2e-51 Identities = 112/173 (64%), Positives = 123/173 (71%) Frame = -1
Query: 522 EDDPEYELIVDCNTLSADXXXXXXXXXXXIRDRYRLKFPELESLVLRPIDYARVVKKIGN 343 E+DPEY+LIVDCN LS D IRD+YRLKFPELESLV PIDYARVV+KIGN Sbjct: 88 EEDPEYQLIVDCNALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPIDYARVVQKIGN 147
Query: 342 EMDXXXXXXXXXXLSATIMVVSVTASTTTGKPLSEENLQKTXXXXXXXXXXXXXXXXXXD 163 EMD SA IMV+SVTASTT+GKPLSEENL KT + Sbjct: 148 EMDLTLVDLEGLLPSAIIMVISVTASTTSGKPLSEENLVKTIEACERALTLDAAKKKVLE 207
Query: 162 FVESRMGYIAPNLSAIVGTAVAAKLMGVAGGLIALSKMPACNVQTLGAKKKTL 4 FVESRMGYIAPNLSAIVG+AVA+KLMG AGGL AL+KMPACNVQ LGAK+K L Sbjct: 208 FVESRMGYIAPNLSAIVGSAVASKLMGTAGGLGALAKMPACNVQLLGAKRKNL 260
>tr|B8ASV6|B8ASV6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_16933 PE=4 SV=1 Length = 538
Score = 204 bits (519), Expect = 2e-51 Identities = 112/173 (64%), Positives = 123/173 (71%) Frame = -1
Query: 522 EDDPEYELIVDCNTLSADXXXXXXXXXXXIRDRYRLKFPELESLVLRPIDYARVVKKIGN 343 E+DPEY+LIVDCN LS D IRD+YRLKFPELESLV PIDYARVV+KIGN Sbjct: 109 EEDPEYQLIVDCNALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPIDYARVVQKIGN 168
Query: 342 EMDXXXXXXXXXXLSATIMVVSVTASTTTGKPLSEENLQKTXXXXXXXXXXXXXXXXXXD 163 EMD SA IMV+SVTASTT+GKPLSEENL KT + Sbjct: 169 EMDLTLVDLEGLLPSAIIMVISVTASTTSGKPLSEENLVKTIEACERALTLDAAKKKVLE 228
Query: 162 FVESRMGYIAPNLSAIVGTAVAAKLMGVAGGLIALSKMPACNVQTLGAKKKTL 4 FVESRMGYIAPNLSAIVG+AVA+KLMG AGGL AL+KMPACNVQ LGAK+K L Sbjct: 229 FVESRMGYIAPNLSAIVGSAVASKLMGTAGGLGALAKMPACNVQLLGAKRKNL 281
>tr|A3AWA0|A3AWA0_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_015072 PE=4 SV=1 Length = 684
Score = 204 bits (519), Expect = 2e-51 Identities = 112/173 (64%), Positives = 123/173 (71%) Frame = -1
Query: 522 EDDPEYELIVDCNTLSADXXXXXXXXXXXIRDRYRLKFPELESLVLRPIDYARVVKKIGN 343 E+DPEY+LIVDCN LS D IRD+YRLKFPELESLV PIDYARVV+KIGN Sbjct: 289 EEDPEYQLIVDCNALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPIDYARVVQKIGN 348
Query: 342 EMDXXXXXXXXXXLSATIMVVSVTASTTTGKPLSEENLQKTXXXXXXXXXXXXXXXXXXD 163 EMD SA IMV+SVTASTT+GKPLSEENL KT + Sbjct: 349 EMDLTLVDLEGLLPSAIIMVISVTASTTSGKPLSEENLVKTIEACERALTLDAAKKKVLE 408
Query: 162 FVESRMGYIAPNLSAIVGTAVAAKLMGVAGGLIALSKMPACNVQTLGAKKKTL 4 FVESRMGYIAPNLSAIVG+AVA+KLMG AGGL AL+KMPACNVQ LGAK+K L Sbjct: 409 FVESRMGYIAPNLSAIVGSAVASKLMGTAGGLGALAKMPACNVQLLGAKRKNL 461
>tr|Q8H4L0|Q8H4L0_ORYSJ Os07g0141600 protein OS=Oryza sativa subsp. japonica GN=OJ1351_C05.114 PE=4 SV=2 Length = 484
Score = 196 bits (499), Expect = 5e-49 Identities = 112/173 (64%), Positives = 120/173 (69%) Frame = -1
Query: 522 EDDPEYELIVDCNTLSADXXXXXXXXXXXIRDRYRLKFPELESLVLRPIDYARVVKKIGN 343 E+DPEY+LIVD N LS D IRD+YRLKFPELESLV PIDYARVV+KIGN Sbjct: 88 EEDPEYQLIVDFNALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPIDYARVVQKIGN 147
Query: 342 EMDXXXXXXXXXXLSATIMVVSVTASTTTGKPLSEENLQKTXXXXXXXXXXXXXXXXXXD 163 E+D SA IMVVSVTASTT GKPLSEENL KT D Sbjct: 148 EIDLTLVDLEGLLPSAIIMVVSVTASTTNGKPLSEENLAKTIEACERALTLDAAKKKVLD 207
Query: 162 FVESRMGYIAPNLSAIVGTAVAAKLMGVAGGLIALSKMPACNVQTLGAKKKTL 4 FVESRMG IAPNLSAIVG+AVA+KLMG AGGL AL+KMPACNVQ LGAKKK L Sbjct: 208 FVESRMGRIAPNLSAIVGSAVASKLMGTAGGLGALAKMPACNVQLLGAKKKNL 260
>tr|A2YI25|A2YI25_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_24854 PE=4 SV=1 Length = 484
Score = 196 bits (499), Expect = 5e-49 Identities = 112/173 (64%), Positives = 120/173 (69%) Frame = -1
Query: 522 EDDPEYELIVDCNTLSADXXXXXXXXXXXIRDRYRLKFPELESLVLRPIDYARVVKKIGN 343 E+DPEY+LIVD N LS D IRD+YRLKFPELESLV PIDYARVV+KIGN Sbjct: 88 EEDPEYQLIVDFNALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPIDYARVVQKIGN 147
Query: 342 EMDXXXXXXXXXXLSATIMVVSVTASTTTGKPLSEENLQKTXXXXXXXXXXXXXXXXXXD 163 E+D SA IMVVSVTASTT GKPLSEENL KT D Sbjct: 148 EIDLTLVDLEGLLPSAIIMVVSVTASTTNGKPLSEENLAKTIEACERALTLDAAKKKVLD 207
Query: 162 FVESRMGYIAPNLSAIVGTAVAAKLMGVAGGLIALSKMPACNVQTLGAKKKTL 4 FVESRMG IAPNLSAIVG+AVA+KLMG AGGL AL+KMPACNVQ LGAKKK L Sbjct: 208 FVESRMGRIAPNLSAIVGSAVASKLMGTAGGLGALAKMPACNVQLLGAKKKNL 260
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