BP916322
Clone id YMU001_000086_D04
Library
Length 455
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000086_D04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CCTTTGACAAGTCCAAGGAGTCCTTGGACAAAGAGATTGAAGACAAGGGTGCTAATCTGA
ACCCCAAAGTTGTTGAGATATACAAATCTTCCTCAACATTCATCGTCAAGAAATTGCTCA
AGGAACCCAACGAGGCCAATGTAAAGGGAAACCCAGAGGCAGTGCAAGGAACCCTTCAGG
AGCTTGTGAAAGCAGGCACAGTGGTTTTACAAAACCTAATTTGGTGCAACCACAGATTAA
ATCATGGTTGTCAGATGGAGAAGGTTCTGTAATTGTACAGAGAGTATGCATCGTTGCGGG
ACGGATTAGTTTTTATCTGACTTGGGTCCTTTTAGCAGTATAAATCATGCCGGTGTGATT
AGGCTTACTTTGTTGAAACGTGATCAGATGGACTGATTATGATGATTTGAAAGTTGATTT
ATTCCGACGGTGGGACTGAAGATCATTGAGGGGTA
■■Homology search results ■■ -
sp_hit_id Q0JPA6
Definition sp|Q0JPA6|SRS1_ORYSJ Salt stress root protein RS1 OS=Oryza sativa subsp. japonica
Align length 61
Score (bit) 45.4
E-value 0.0001
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916322|Adiantum capillus-veneris mRNA, clone:
YMU001_000086_D04.
(455 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q0JPA6|SRS1_ORYSJ Salt stress root protein RS1 OS=Oryza sativ... 45 1e-04
sp|A2WMG6|SRS1_ORYSI Salt stress root protein RS1 OS=Oryza sativ... 45 1e-04
sp|Q9N1A7|STP2_PANTR Nuclear transition protein 2 (Fragment) OS=... 32 1.3
sp|A8F5H5|GATB_THELT Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransf... 32 1.3
sp|A5IMT3|GATB_THEP1 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransf... 32 1.7
sp|Q9K8U9|O16G_BACHD Oligo-1,6-glucosidase OS=Bacillus haloduran... 31 2.9
sp|Q9X100|GATB_THEMA Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransf... 30 3.8
sp|Q59037|SMC_METJA Chromosome partition protein smc homolog OS=... 30 4.9
sp|Q7UK56|GATB_RHOBA Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransf... 30 4.9
sp|Q3AD35|GATB_CARHZ Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransf... 30 4.9
sp|Q58194|HMD_METJA 5,10-methenyltetrahydromethanopterin hydroge... 30 6.4
sp|Q4PHC3|MVP1_USTMA Sorting nexin MVP1 OS=Ustilago maydis GN=MV... 29 8.4

>sp|Q0JPA6|SRS1_ORYSJ Salt stress root protein RS1 OS=Oryza sativa
subsp. japonica GN=Os01g0233000 PE=2 SV=1
Length = 204

Score = 45.4 bits (106), Expect = 1e-04
Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +3

Query: 12 SKESLDKEIEDKGANLNPKVVEIYKSSSTFIVKKLLKEPNEAN-VKGNPEAVQGTLQELV 188
+KE + KEI+DK L PKVVE+ +SS I K LLK+ A+ +K N AV L+EL
Sbjct: 34 NKEEIGKEIDDKKTELEPKVVEVVESSPPEI-KALLKDKKTASKIKKNGPAVTKFLEELA 92

Query: 189 K 191
K
Sbjct: 93 K 93


>sp|A2WMG6|SRS1_ORYSI Salt stress root protein RS1 OS=Oryza sativa
subsp. indica GN=OsI_001009 PE=1 SV=1
Length = 204

Score = 45.4 bits (106), Expect = 1e-04
Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +3

Query: 12 SKESLDKEIEDKGANLNPKVVEIYKSSSTFIVKKLLKEPNEAN-VKGNPEAVQGTLQELV 188
+KE + KEI+DK L PKVVE+ +SS I K LLK+ A+ +K N AV L+EL
Sbjct: 34 NKEEIGKEIDDKKTELEPKVVEVVESSPPEI-KALLKDKKTASKIKKNGPAVTKFLEELA 92

Query: 189 K 191
K
Sbjct: 93 K 93


>sp|Q9N1A7|STP2_PANTR Nuclear transition protein 2 (Fragment) OS=Pan
troglodytes GN=TNP2 PE=2 SV=1
Length = 133

Score = 32.0 bits (71), Expect = 1.3
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 6/65 (9%)
Frame = +2

Query: 56 SEPQSC*DIQIFLNIHRQEIAQGTQRGQCKGKPRGSA------RNPSGACESRHSGFTKP 217
S+PQSC HRQ +Q ++ C + R S+ RNP+GA S P
Sbjct: 19 SQPQSC-----TCTRHRQTFSQSCRQSHCGSRSRSSSQSPASHRNPTGAHSSSGHQSQSP 73

Query: 218 NLVQP 232
N P
Sbjct: 74 NTSPP 78


>sp|A8F5H5|GATB_THELT Aspartyl/glutamyl-tRNA(Asn/Gln)
amidotransferase subunit B OS=Thermotoga lettingae
(strain ATCC BAA-301 / DSM 14385 / TMO) GN=gatB PE=3
SV=1
Length = 478

Score = 32.0 bits (71), Expect = 1.3
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +3

Query: 12 SKESLDKEIEDKGANLNPKVVEIYKSSST----FIVKKLLKEPNEANVKGNPEAVQGTLQ 179
S E+L + I K NPK VE YKS T F V +++KE A NP+ V ++
Sbjct: 418 SDENLLENIVKKVLEDNPKAVEQYKSGKTGVIGFFVGQVMKETKGA---ANPQVVNKIIK 474

Query: 180 ELV 188
+++
Sbjct: 475 QIL 477


>sp|A5IMT3|GATB_THEP1 Aspartyl/glutamyl-tRNA(Asn/Gln)
amidotransferase subunit B OS=Thermotoga petrophila
(strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=gatB PE=3
SV=1
Length = 482

Score = 31.6 bits (70), Expect = 1.7
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Frame = +3

Query: 12 SKESLDKEIEDKGANLNPKVVEIYKS----SSTFIVKKLLKEPNEANVKGNPEAVQGTLQ 179
S E L +E+ K NPK V+ YKS ++ F V +++ E K NPE +Q
Sbjct: 420 SDEKLIEELVKKAMEQNPKAVQDYKSGKKKAAGFFVGYVMR---ETKGKANPELTNRIIQ 476

Query: 180 ELVK 191
+L++
Sbjct: 477 KLLE 480


>sp|Q9K8U9|O16G_BACHD Oligo-1,6-glucosidase OS=Bacillus halodurans
GN=malL PE=3 SV=1
Length = 561

Score = 30.8 bits (68), Expect = 2.9
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 12/67 (17%)
Frame = +2

Query: 92 LNIHRQEIAQG----TQRGQCKGKPRGSARNPSGACESRHSGFT--------KPNLVQPQ 235
LN+++++ AQG T K R +AR P E++H GFT PN +
Sbjct: 390 LNMYKEKRAQGVPHETLMASIHAKGRDNARTPMQWDETKHGGFTDGTPWLEVNPNYKEIN 449

Query: 236 IKSWLSD 256
+K L D
Sbjct: 450 VKQALKD 456


>sp|Q9X100|GATB_THEMA Aspartyl/glutamyl-tRNA(Asn/Gln)
amidotransferase subunit B OS=Thermotoga maritima
GN=gatB PE=3 SV=1
Length = 482

Score = 30.4 bits (67), Expect = 3.8
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = +3

Query: 18 ESLDKEIEDKGANLNPKVVEIYKS----SSTFIVKKLLKEPNEANVKGNPEAVQGTLQEL 185
E L +E+ K NPK V+ YKS ++ F V +++ E K NPE +Q+L
Sbjct: 422 EKLIEELVKKAMEQNPKAVQDYKSGKKKAAGFFVGYVMR---ETKGKANPELTNRIIQKL 478

Query: 186 VK 191
++
Sbjct: 479 LE 480


>sp|Q59037|SMC_METJA Chromosome partition protein smc homolog
OS=Methanocaldococcus jannaschii GN=MJ1643 PE=3 SV=2
Length = 1169

Score = 30.0 bits (66), Expect = 4.9
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Frame = +3

Query: 6 DKSKESLDKEIEDKGANLN-----PKVVEIYKSSSTFIVKKLLKEPNEANVKGNPEAVQG 170
+K K L EI DKG L PK+ E+ K S I KK++ E N + K + E
Sbjct: 813 EKEKAKLKNEI-DKGLTLVKEILIPKIEELNKKVSELINKKVILEKNISFYKESIEKNLS 871

Query: 171 TLQELVKAGTVVLQNL 218
L+E K + +NL
Sbjct: 872 ILEEKRKRYEELAKNL 887


>sp|Q7UK56|GATB_RHOBA Aspartyl/glutamyl-tRNA(Asn/Gln)
amidotransferase subunit B OS=Rhodopirellula baltica
GN=gatB PE=3 SV=1
Length = 497

Score = 30.0 bits (66), Expect = 4.9
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +3

Query: 6 DKSKESLDKEIEDKGANLNPKVVEIYKSSSTFIVKKLLKEPNEANVKGNPEAVQGTLQEL 185
D + ESL KE+ NP+VVE K V L+ + + N +P+AV+ L +L
Sbjct: 438 DDALESLCKEL----LAANPQVVEDVKGGKQQAVGALIGQAKKKNPNASPQAVRQLLIDL 493

Query: 186 V 188
+
Sbjct: 494 I 494


>sp|Q3AD35|GATB_CARHZ Aspartyl/glutamyl-tRNA(Asn/Gln)
amidotransferase subunit B OS=Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008) GN=gatB PE=3
SV=1
Length = 481

Score = 30.0 bits (66), Expect = 4.9
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = +3

Query: 36 IEDKGANLNPKVVEIYKSSST----FIVKKLLKEPNEANVKGNPEAVQGTLQE 182
+ DK NPK VE YK+ F+V +++K E + NPEAV L++
Sbjct: 427 VVDKVIAANPKAVEDYKNGKEKALGFLVGQIMK---ETRGRANPEAVNQLLRD 476


tr_hit_id Q2L6T2
Definition tr|Q2L6T2|Q2L6T2_ARATH Uncharacterized protein At4g20260.4 OS=Arabidopsis thaliana
Align length 63
Score (bit) 63.9
E-value 4.0e-09
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916322|Adiantum capillus-veneris mRNA, clone:
YMU001_000086_D04.
(455 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q2L6T2|Q2L6T2_ARATH Uncharacterized protein At4g20260.4 OS=Ar... 64 4e-09
tr|Q96262|Q96262_ARATH Endomembrane-associated protein OS=Arabid... 62 1e-08
tr|Q8LDH5|Q8LDH5_ARATH Endomembrane-associated protein OS=Arabid... 62 1e-08
tr|Q8H7H8|Q8H7H8_ARATH Putative uncharacterized protein (Fragmen... 62 1e-08
tr|A7PN48|A7PN48_VITVI Chromosome chr1 scaffold_22, whole genome... 61 3e-08
tr|A5B3K2|A5B3K2_VITVI Putative uncharacterized protein OS=Vitis... 61 3e-08
tr|Q1PG88|Q1PG88_STRAF DREPP4 protein (Fragment) OS=Striga asiat... 58 2e-07
tr|A9NKB2|A9NKB2_PICSI Putative uncharacterized protein OS=Picea... 57 4e-07
tr|B7FH09|B7FH09_MEDTR Putative uncharacterized protein OS=Medic... 55 2e-06
tr|Q9SMK5|Q9SMK5_CICAR Plasma membrane intrinsic polypeptide OS=... 54 3e-06
tr|Q9M3U3|Q9M3U3_TOBAC DREPP1 protein OS=Nicotiana tabacum GN=dr... 54 5e-06
tr|O49910|O49910_TOBAC Plasma membrane polypeptide OS=Nicotiana ... 54 5e-06
tr|Q9M3U5|Q9M3U5_TOBAC DREPP2 protein OS=Nicotiana tabacum GN=dr... 52 1e-05
tr|O49911|O49911_TOBAC Plasma membrane polypeptide OS=Nicotiana ... 52 1e-05
tr|O24124|O24124_TOBAC 22 kDa polypeptide (DREPP4 protein) OS=Ni... 52 1e-05
tr|B6TK17|B6TK17_MAIZE DREPP2 protein OS=Zea mays PE=2 SV=1 50 7e-05
tr|B6TNI6|B6TNI6_MAIZE DREPP4 protein OS=Zea mays PE=2 SV=1 46 8e-04
tr|B7EAP0|B7EAP0_ORYSJ cDNA clone:J013002J14, full insert sequen... 45 0.001
tr|B6UG58|B6UG58_MAIZE DREPP4 protein OS=Zea mays PE=2 SV=1 45 0.001
tr|B4FAQ9|B4FAQ9_MAIZE DREPP4 protein OS=Zea mays PE=2 SV=1 45 0.001
tr|Q6K4S7|Q6K4S7_ORYSJ Os02g0285300 protein OS=Oryza sativa subs... 45 0.002
tr|A2X3I3|A2X3I3_ORYSI Putative uncharacterized protein OS=Oryza... 45 0.002
tr|B4FUC4|B4FUC4_MAIZE Putative uncharacterized protein OS=Zea m... 42 0.020
tr|Q22N12|Q22N12_TETTH Putative uncharacterized protein OS=Tetra... 33 7.1
tr|Q8D7M7|Q8D7M7_VIBVU Sensor protein OS=Vibrio vulnificus GN=VV... 33 9.3
tr|Q7MEN6|Q7MEN6_VIBVY Sensor protein OS=Vibrio vulnificus (stra... 33 9.3

>tr|Q2L6T2|Q2L6T2_ARATH Uncharacterized protein At4g20260.4
OS=Arabidopsis thaliana GN=At4g20260 PE=4 SV=1
Length = 226

Score = 63.9 bits (154), Expect = 4e-09
Identities = 31/63 (49%), Positives = 46/63 (73%)
Frame = +3

Query: 3 FDKSKESLDKEIEDKGANLNPKVVEIYKSSSTFIVKKLLKEPNEANVKGNPEAVQGTLQE 182
FD+SKE+++KEIE+K L PKVVE Y+++S + + L+++P A +K N AVQ L+E
Sbjct: 33 FDESKETINKEIEEKKTELQPKVVETYEATSAEVKQALVRDPKVAGLKKNSAAVQKYLEE 92

Query: 183 LVK 191
LVK
Sbjct: 93 LVK 95


>tr|Q96262|Q96262_ARATH Endomembrane-associated protein
OS=Arabidopsis thaliana GN=AT4g20260 PE=2 SV=1
Length = 225

Score = 62.0 bits (149), Expect = 1e-08
Identities = 33/63 (52%), Positives = 46/63 (73%)
Frame = +3

Query: 3 FDKSKESLDKEIEDKGANLNPKVVEIYKSSSTFIVKKLLKEPNEANVKGNPEAVQGTLQE 182
FD+SKE+++KEIE+K L PKVVE Y+++S VK L+++P A +K N AVQ L+E
Sbjct: 33 FDESKETINKEIEEKKTELQPKVVETYEATSA-EVKALVRDPKVAGLKKNSAAVQKYLEE 91

Query: 183 LVK 191
LVK
Sbjct: 92 LVK 94


>tr|Q8LDH5|Q8LDH5_ARATH Endomembrane-associated protein
OS=Arabidopsis thaliana PE=2 SV=1
Length = 224

Score = 62.0 bits (149), Expect = 1e-08
Identities = 33/63 (52%), Positives = 46/63 (73%)
Frame = +3

Query: 3 FDKSKESLDKEIEDKGANLNPKVVEIYKSSSTFIVKKLLKEPNEANVKGNPEAVQGTLQE 182
FD+SKE+++KEIE+K L PKVVE Y+++S VK L+++P A +K N AVQ L+E
Sbjct: 33 FDESKETINKEIEEKKTELQPKVVETYEATSA-EVKALVRDPKVAGLKKNSAAVQKYLEE 91

Query: 183 LVK 191
LVK
Sbjct: 92 LVK 94


>tr|Q8H7H8|Q8H7H8_ARATH Putative uncharacterized protein (Fragment)
OS=Arabidopsis thaliana PE=2 SV=1
Length = 167

Score = 62.0 bits (149), Expect = 1e-08
Identities = 33/63 (52%), Positives = 46/63 (73%)
Frame = +3

Query: 3 FDKSKESLDKEIEDKGANLNPKVVEIYKSSSTFIVKKLLKEPNEANVKGNPEAVQGTLQE 182
FD+SKE+++KEIE+K L PKVVE Y+++S VK L+++P A +K N AVQ L+E
Sbjct: 33 FDESKETINKEIEEKKTELQPKVVETYEATSA-EVKALVRDPKVAGLKKNSAAVQKYLEE 91

Query: 183 LVK 191
LVK
Sbjct: 92 LVK 94


>tr|A7PN48|A7PN48_VITVI Chromosome chr1 scaffold_22, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00021068001
PE=4 SV=1
Length = 146

Score = 60.8 bits (146), Expect = 3e-08
Identities = 36/63 (57%), Positives = 44/63 (69%)
Frame = +3

Query: 3 FDKSKESLDKEIEDKGANLNPKVVEIYKSSSTFIVKKLLKEPNEANVKGNPEAVQGTLQE 182
FD SKE ++K+ E K L PKV+EIY++SST I K L+KEP EA +K N AVQ L E
Sbjct: 33 FDDSKEEINKDFEAKKDELQPKVIEIYEASSTEI-KTLVKEPKEAGLK-NSTAVQKFLDE 90

Query: 183 LVK 191
LVK
Sbjct: 91 LVK 93


>tr|A5B3K2|A5B3K2_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_014491 PE=4 SV=1
Length = 190

Score = 60.8 bits (146), Expect = 3e-08
Identities = 36/63 (57%), Positives = 44/63 (69%)
Frame = +3

Query: 3 FDKSKESLDKEIEDKGANLNPKVVEIYKSSSTFIVKKLLKEPNEANVKGNPEAVQGTLQE 182
FD SKE ++K+ E K L PKV+EIY++SST I K L+KEP EA +K N AVQ L E
Sbjct: 33 FDDSKEEINKDFEAKKDELQPKVIEIYEASSTEI-KTLVKEPKEAGLK-NSTAVQKFLDE 90

Query: 183 LVK 191
LVK
Sbjct: 91 LVK 93


>tr|Q1PG88|Q1PG88_STRAF DREPP4 protein (Fragment) OS=Striga asiatica
PE=2 SV=1
Length = 166

Score = 58.2 bits (139), Expect = 2e-07
Identities = 32/63 (50%), Positives = 43/63 (68%)
Frame = +3

Query: 3 FDKSKESLDKEIEDKGANLNPKVVEIYKSSSTFIVKKLLKEPNEANVKGNPEAVQGTLQE 182
FD++KE KE+++K L PKVVEIY++SST I K L+KEP ++VK + AV L E
Sbjct: 46 FDEAKEQYSKELDEKKTELQPKVVEIYEASSTEI-KALVKEPKGSSVKKHSAAVXKFLDE 104

Query: 183 LVK 191
L K
Sbjct: 105 LAK 107


>tr|A9NKB2|A9NKB2_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 223

Score = 57.4 bits (137), Expect = 4e-07
Identities = 30/65 (46%), Positives = 42/65 (64%)
Frame = +3

Query: 3 FDKSKESLDKEIEDKGANLNPKVVEIYKSSSTFIVKKLLKEPNEANVKGNPEAVQGTLQE 182
F+ SKES++KEI++K L PKV+E+YKS K ++K P +K P+ VQ L+E
Sbjct: 32 FEASKESIEKEIQEKQEELQPKVLEVYKSIDA-ETKIIVKNPTANAIKKQPKPVQKLLEE 90

Query: 183 LVKAG 197
LVK G
Sbjct: 91 LVKIG 95


>tr|B7FH09|B7FH09_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=2 SV=1
Length = 214

Score = 54.7 bits (130), Expect = 2e-06
Identities = 29/63 (46%), Positives = 43/63 (68%)
Frame = +3

Query: 3 FDKSKESLDKEIEDKGANLNPKVVEIYKSSSTFIVKKLLKEPNEANVKGNPEAVQGTLQE 182
FD+SKE ++KE E+K L KV+ +Y++SST I K L+KE ++A +K N V ++E
Sbjct: 33 FDESKEGINKEFEEKKTELQTKVLAVYEASSTEI-KSLVKERDQAGLKKNSTEVHKFIEE 91

Query: 183 LVK 191
LVK
Sbjct: 92 LVK 94


>tr|Q9SMK5|Q9SMK5_CICAR Plasma membrane intrinsic polypeptide
OS=Cicer arietinum PE=2 SV=1
Length = 208

Score = 54.3 bits (129), Expect = 3e-06
Identities = 30/63 (47%), Positives = 42/63 (66%)
Frame = +3

Query: 3 FDKSKESLDKEIEDKGANLNPKVVEIYKSSSTFIVKKLLKEPNEANVKGNPEAVQGTLQE 182
FD+SKE +KE E+K L PKV+ +Y++ ST I K L+KE +EA +K N V ++E
Sbjct: 34 FDESKEVYNKEFEEKKTELQPKVLVVYEALSTQI-KSLVKERDEAGLKKNTTEVNKFIEE 92

Query: 183 LVK 191
LVK
Sbjct: 93 LVK 95