BP916328
Clone id YMU001_000086_D11
Library
Length 479
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000086_D11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AGCACTTTGGGTGAAGTCGTGCCAATTTGTGTCCTTACAACCATGTCTTCAAACCGCCTT
TCTTTCCATTGATGCCTGCAACTAATTCTGTAATTCTACAAAATCCTGCTATGCTATGTT
TCAACAGATTGGGAGCTGGCTTTACTTTGATGGAGTTGCTGGGGATGTCAGTTTAAATTT
ATGCTATGTTAGGGATGTCCAAAACTAAAGCTGGATTAAAAGTGGAGATATGCAGCTCCA
TCAAATCGAGCTCCAGTAACTGTTGGATGTTGTCTATACAACTATTTAGAACCGACTGCT
TTCGACCGACTACTGCATGGAATCTGGAGCTCTGCAGCCCCATGGGTTTTCCCTAGCCCA
GTTCCACTGATCACGACACATCTCATCTATGCCATAGCGAGCCCTCCAATGGAGCTCCCT
TTCAACCTTCTCTGTAGAAGCATATACTTCACTGCTATCTCCAGCACGACGACCAATAA
■■Homology search results ■■ -
sp_hit_id Q43070
Definition sp|Q43070|GALE1_PEA UDP-glucose 4-epimerase OS=Pisum sativum
Align length 45
Score (bit) 84.0
E-value 3.0e-16
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916328|Adiantum capillus-veneris mRNA, clone:
YMU001_000086_D11.
(479 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q43070|GALE1_PEA UDP-glucose 4-epimerase OS=Pisum sativum GN=... 84 3e-16
sp|O65781|GALE2_CYATE UDP-glucose 4-epimerase GEPI48 OS=Cyamopsi... 84 4e-16
sp|Q42605|GALE1_ARATH UDP-glucose 4-epimerase 1 OS=Arabidopsis t... 83 6e-16
sp|O65780|GALE1_CYATE UDP-glucose 4-epimerase GEPI42 OS=Cyamopsi... 80 4e-15
sp|Q9T0A7|GALE3_ARATH UDP-glucose 4-epimerase 3 OS=Arabidopsis t... 77 3e-14
sp|Q9SN58|GALE2_ARATH UDP-glucose 4-epimerase 2 OS=Arabidopsis t... 77 3e-14
sp|P35673|GALE_ERWAM UDP-glucose 4-epimerase OS=Erwinia amylovor... 54 5e-07
sp|Q9W0P5|GALE_DROME Probable UDP-glucose 4-epimerase OS=Drosoph... 53 8e-07
sp|Q14376|GALE_HUMAN UDP-glucose 4-epimerase OS=Homo sapiens GN=... 52 1e-06
sp|P04397|GAL10_YEAST Bifunctional protein GAL10 OS=Saccharomyce... 52 1e-06
sp|Q9HDU3|GAL10_SCHPO Bifunctional protein gal10 OS=Schizosaccha... 52 1e-06
sp|P40801|GAL10_PACTA Bifunctional protein GAL10 OS=Pachysolen t... 52 1e-06
sp|P18645|GALE_RAT UDP-glucose 4-epimerase OS=Rattus norvegicus ... 52 1e-06
sp|Q5R8D0|GALE_PONAB UDP-glucose 4-epimerase OS=Pongo abelii GN=... 52 2e-06
sp|Q8R059|GALE_MOUSE UDP-glucose 4-epimerase OS=Mus musculus GN=... 52 2e-06
sp|P55180|GALE_BACSU UDP-glucose 4-epimerase OS=Bacillus subtili... 50 5e-06
sp|Q553X7|GALE_DICDI UDP-glucose 4-epimerase OS=Dictyostelium di... 50 7e-06
sp|Q9CNY5|GALE_PASMU UDP-glucose 4-epimerase OS=Pasteurella mult... 48 2e-05
sp|P24325|GALE_HAEIN UDP-glucose 4-epimerase OS=Haemophilus infl... 48 2e-05
sp|P09147|GALE_ECOLI UDP-glucose 4-epimerase OS=Escherichia coli... 48 3e-05
sp|P22715|GALE_SALTY UDP-glucose 4-epimerase OS=Salmonella typhi... 47 3e-05
sp|Q56093|GALE_SALTI UDP-glucose 4-epimerase OS=Salmonella typhi... 47 3e-05
sp|Q59678|GALE_PASHA UDP-glucose 4-epimerase OS=Pasteurella haem... 47 3e-05
sp|Q9F7D4|GALE_YERPE UDP-glucose 4-epimerase OS=Yersinia pestis ... 44 3e-04
sp|Q57301|GALE_YEREN UDP-glucose 4-epimerase OS=Yersinia enteroc... 44 4e-04
sp|Q9SUN3|ARAE3_ARATH Putative UDP-arabinose 4-epimerase 3 OS=Ar... 44 5e-04
sp|P09609|GAL10_KLULA Bifunctional protein GAL10 OS=Kluyveromyce... 43 6e-04
sp|Q9KDV3|GALE_BACHD UDP-glucose 4-epimerase OS=Bacillus halodur... 43 8e-04
sp|Q9Y7X5|YGRE_SCHPO Uncharacterized protein C365.14c OS=Schizos... 42 0.001
sp|Q8H0B6|ARAE2_ORYSJ Probable UDP-arabinose 4-epimerase 2 OS=Or... 42 0.001

>sp|Q43070|GALE1_PEA UDP-glucose 4-epimerase OS=Pisum sativum
GN=GALE PE=2 SV=1
Length = 350

Score = 84.0 bits (206), Expect = 3e-16
Identities = 32/45 (71%), Positives = 40/45 (88%)
Frame = -3

Query: 471 RRAGDSSEVYASTEKVERELHWRARYGIDEMCRDQWNWARENPWG 337
RR GD++EVYAST K E+EL W+A+YG++EMCRDQWNWA+ NPWG
Sbjct: 301 RRPGDATEVYASTAKAEKELGWKAKYGVEEMCRDQWNWAKNNPWG 345


>sp|O65781|GALE2_CYATE UDP-glucose 4-epimerase GEPI48 OS=Cyamopsis
tetragonoloba PE=2 SV=1
Length = 350

Score = 83.6 bits (205), Expect = 4e-16
Identities = 34/46 (73%), Positives = 40/46 (86%)
Frame = -3

Query: 474 GRRAGDSSEVYASTEKVERELHWRARYGIDEMCRDQWNWARENPWG 337
GRR GD+ VYAST K EREL+W+A+YGIDEMCRDQWNWA +NP+G
Sbjct: 296 GRRPGDAEVVYASTNKAERELNWKAKYGIDEMCRDQWNWASKNPYG 341


>sp|Q42605|GALE1_ARATH UDP-glucose 4-epimerase 1 OS=Arabidopsis
thaliana GN=At1g12780 PE=1 SV=2
Length = 351

Score = 83.2 bits (204), Expect = 6e-16
Identities = 32/45 (71%), Positives = 39/45 (86%)
Frame = -3

Query: 471 RRAGDSSEVYASTEKVERELHWRARYGIDEMCRDQWNWARENPWG 337
RR+GD++ VYASTEK E+EL W+A+YG+DEMCRDQW WA NPWG
Sbjct: 302 RRSGDATAVYASTEKAEKELGWKAKYGVDEMCRDQWKWANNNPWG 346


>sp|O65780|GALE1_CYATE UDP-glucose 4-epimerase GEPI42 OS=Cyamopsis
tetragonoloba PE=2 SV=1
Length = 354

Score = 80.5 bits (197), Expect = 4e-15
Identities = 31/45 (68%), Positives = 38/45 (84%)
Frame = -3

Query: 471 RRAGDSSEVYASTEKVERELHWRARYGIDEMCRDQWNWARENPWG 337
RR GD++ VYASTEK E+EL W+A+YG++EMCRDQW WA NPWG
Sbjct: 305 RRPGDATAVYASTEKAEKELGWKAKYGVEEMCRDQWKWASNNPWG 349


>sp|Q9T0A7|GALE3_ARATH UDP-glucose 4-epimerase 3 OS=Arabidopsis
thaliana GN=At4g23920 PE=2 SV=1
Length = 350

Score = 77.4 bits (189), Expect = 3e-14
Identities = 32/46 (69%), Positives = 38/46 (82%)
Frame = -3

Query: 474 GRRAGDSSEVYASTEKVERELHWRARYGIDEMCRDQWNWARENPWG 337
GRR GD+ VYASTEK EREL+W+A+ GI+EMCRD WNWA NP+G
Sbjct: 295 GRRPGDAEVVYASTEKAERELNWKAKNGIEEMCRDLWNWASNNPYG 340


>sp|Q9SN58|GALE2_ARATH UDP-glucose 4-epimerase 2 OS=Arabidopsis
thaliana GN=At4g10960 PE=2 SV=3
Length = 351

Score = 77.4 bits (189), Expect = 3e-14
Identities = 31/46 (67%), Positives = 38/46 (82%)
Frame = -3

Query: 474 GRRAGDSSEVYASTEKVERELHWRARYGIDEMCRDQWNWARENPWG 337
GRR GD+ VYASTE+ E EL+W+A+YGI+EMCRD WNWA NP+G
Sbjct: 296 GRRPGDAEVVYASTERAESELNWKAKYGIEEMCRDLWNWASNNPYG 341


>sp|P35673|GALE_ERWAM UDP-glucose 4-epimerase OS=Erwinia amylovora
GN=galE PE=3 SV=1
Length = 337

Score = 53.5 bits (127), Expect = 5e-07
Identities = 22/45 (48%), Positives = 28/45 (62%)
Frame = -3

Query: 471 RRAGDSSEVYASTEKVERELHWRARYGIDEMCRDQWNWARENPWG 337
RR GD + +A ++EL+WR GIDEM RD WNW +NP G
Sbjct: 291 RRDGDLAAFWADATLADKELNWRVSRGIDEMMRDTWNWQSQNPQG 335


>sp|Q9W0P5|GALE_DROME Probable UDP-glucose 4-epimerase OS=Drosophila
melanogaster GN=CG12030 PE=1 SV=1
Length = 350

Score = 52.8 bits (125), Expect = 8e-07
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = -3

Query: 477 IGRRAGDSSEVYASTEKVERELHWRARYGIDEMCRDQWNWARENPWG 337
+ RR+GD + YA +++L W+A GID+MC D W W +NP G
Sbjct: 300 VDRRSGDVATCYADATLADKKLGWKAERGIDKMCEDTWRWQSQNPNG 346


>sp|Q14376|GALE_HUMAN UDP-glucose 4-epimerase OS=Homo sapiens
GN=GALE PE=1 SV=2
Length = 348

Score = 52.4 bits (124), Expect = 1e-06
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = -3

Query: 477 IGRRAGDSSEVYASTEKVERELHWRARYGIDEMCRDQWNWARENPWG 337
+ RR GD + YA+ + EL W A G+D MC D W W ++NP G
Sbjct: 297 VARREGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPSG 343


>sp|P04397|GAL10_YEAST Bifunctional protein GAL10 OS=Saccharomyces
cerevisiae GN=GAL10 PE=1 SV=2
Length = 699

Score = 52.4 bits (124), Expect = 1e-06
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = -3

Query: 474 GRRAGDSSEVYASTEKVERELHWRARYGIDEMCRDQWNWARENPWG 337
GRRAGD + A ++ +REL W+ +++ C+D W W ENP+G
Sbjct: 309 GRRAGDVLNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTENPFG 354


tr_hit_id A9SPG4
Definition tr|A9SPG4|A9SPG4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 60
Score (bit) 87.8
E-value 2.0e-16
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916328|Adiantum capillus-veneris mRNA, clone:
YMU001_000086_D11.
(479 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9SPG4|A9SPG4_PHYPA Predicted protein OS=Physcomitrella paten... 88 2e-16
tr|B8LKM2|B8LKM2_PICSI Putative uncharacterized protein OS=Picea... 87 5e-16
tr|Q9CAM5|Q9CAM5_ARATH Uridine diphosphate glucose epimerase, pu... 86 9e-16
tr|Q8LDN8|Q8LDN8_ARATH Uridine diphosphate glucose epimerase, pu... 86 9e-16
tr|Q1XG32|Q1XG32_9POAL UDP-galactose epimerase OS=Paspalum vagin... 86 1e-15
tr|B7FIW1|B7FIW1_MEDTR Putative uncharacterized protein OS=Medic... 86 1e-15
tr|B6TA76|B6TA76_MAIZE UDP-glucose 4-epimerase OS=Zea mays PE=2 ... 86 1e-15
tr|B4FU63|B4FU63_MAIZE Putative uncharacterized protein OS=Zea m... 86 1e-15
tr|B4FG89|B4FG89_MAIZE Putative uncharacterized protein OS=Zea m... 86 1e-15
tr|B7FK31|B7FK31_MEDTR Putative uncharacterized protein OS=Medic... 84 3e-15
tr|B0M3E8|B0M3E8_PEA UDP-galactose 4-epimerase (Fragment) OS=Pis... 84 3e-15
tr|A9PG00|A9PG00_POPTR Putative uncharacterized protein OS=Popul... 83 6e-15
tr|Q6XZA0|Q6XZA0_SOLTU UDP-glucose 4-epimerase OS=Solanum tubero... 83 8e-15
tr|Q58IJ7|Q58IJ7_HORVU UDP-D-glucose epimerase 3 OS=Hordeum vulg... 83 8e-15
tr|Q9SGX0|Q9SGX0_ARATH F1N19.2 OS=Arabidopsis thaliana PE=3 SV=1 82 1e-14
tr|Q9C7W7|Q9C7W7_ARATH UDP-galactose 4-epimerase, putative; 6572... 82 1e-14
tr|A9TFR4|A9TFR4_PHYPA Predicted protein OS=Physcomitrella paten... 82 1e-14
tr|Q6XP48|Q6XP48_SOLTU UDP-Glc-4-epimerase OS=Solanum tuberosum ... 81 2e-14
tr|Q8LNZ3|Q8LNZ3_ORYSJ Os05g0595100 protein OS=Oryza sativa subs... 80 5e-14
tr|A2Y861|A2Y861_ORYSI Putative uncharacterized protein OS=Oryza... 80 5e-14
tr|B6TQ45|B6TQ45_MAIZE UDP-glucose 4-epimerase GEPI48 OS=Zea may... 80 7e-14
tr|A6MD13|A6MD13_9ORYZ UDP glucose-4 epimerase OS=Oryza brachyan... 80 7e-14
tr|A7QU91|A7QU91_VITVI Chromosome chr2 scaffold_176, whole genom... 79 9e-14
tr|A5BGY1|A5BGY1_VITVI Putative uncharacterized protein (Chromos... 79 9e-14
tr|A7QKH3|A7QKH3_VITVI Chromosome chr2 scaffold_112, whole genom... 79 1e-13
tr|Q58IJ5|Q58IJ5_HORVU UDP-D-glucose epimerase 2 OS=Hordeum vulg... 79 1e-13
tr|Q8H0B7|Q8H0B7_ORYSJ Putative UDP-glucose 4-epimerase OS=Oryza... 78 2e-13
tr|Q652A8|Q652A8_ORYSJ Os09g0526700 protein OS=Oryza sativa subs... 78 2e-13
tr|B8BDM3|B8BDM3_ORYSI Putative uncharacterized protein OS=Oryza... 78 2e-13
tr|B8BDM2|B8BDM2_ORYSI Putative uncharacterized protein OS=Oryza... 78 2e-13

>tr|A9SPG4|A9SPG4_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_187084 PE=3 SV=1
Length = 384

Score = 87.8 bits (216), Expect = 2e-16
Identities = 37/60 (61%), Positives = 47/60 (78%)
Frame = -3

Query: 474 GRRAGDSSEVYASTEKVERELHWRARYGIDEMCRDQWNWARENPWGCRAPDSMQ*SVESS 295
GRR GDSSEV+ASTEK E+EL WRA++GI EMCRDQWNWA+ NP+G R ++ + + S
Sbjct: 317 GRRPGDSSEVFASTEKAEKELGWRAKFGIKEMCRDQWNWAKTNPYGYRGQQELEVTTQKS 376


>tr|B8LKM2|B8LKM2_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 356

Score = 86.7 bits (213), Expect = 5e-16
Identities = 35/49 (71%), Positives = 42/49 (85%)
Frame = -3

Query: 471 RRAGDSSEVYASTEKVERELHWRARYGIDEMCRDQWNWARENPWGCRAP 325
RR GD++ VYASTEK E EL W+A+YGI+EMCRDQWNWAR+NPWG +P
Sbjct: 308 RRPGDATAVYASTEKAEHELGWKAKYGIEEMCRDQWNWARQNPWGYISP 356


>tr|Q9CAM5|Q9CAM5_ARATH Uridine diphosphate glucose epimerase,
putative; 80611-78786 OS=Arabidopsis thaliana
GN=F16M19.8 PE=3 SV=1
Length = 353

Score = 85.9 bits (211), Expect = 9e-16
Identities = 33/45 (73%), Positives = 41/45 (91%)
Frame = -3

Query: 471 RRAGDSSEVYASTEKVERELHWRARYGIDEMCRDQWNWARENPWG 337
RRAGD++ VYAST+K E+EL W+A+YG+DEMCRDQWNWA +NPWG
Sbjct: 304 RRAGDATAVYASTQKAEKELGWKAKYGVDEMCRDQWNWANKNPWG 348


>tr|Q8LDN8|Q8LDN8_ARATH Uridine diphosphate glucose epimerase,
putative (At1g63180) (Putative uridine diphosphate
glucose epimerase) OS=Arabidopsis thaliana
GN=At1g63180/F16M19_8 PE=2 SV=1
Length = 351

Score = 85.9 bits (211), Expect = 9e-16
Identities = 33/45 (73%), Positives = 41/45 (91%)
Frame = -3

Query: 471 RRAGDSSEVYASTEKVERELHWRARYGIDEMCRDQWNWARENPWG 337
RRAGD++ VYAST+K E+EL W+A+YG+DEMCRDQWNWA +NPWG
Sbjct: 302 RRAGDATAVYASTQKAEKELGWKAKYGVDEMCRDQWNWANKNPWG 346


>tr|Q1XG32|Q1XG32_9POAL UDP-galactose epimerase OS=Paspalum
vaginatum GN=PvUGE1 PE=2 SV=1
Length = 364

Score = 85.5 bits (210), Expect = 1e-15
Identities = 35/45 (77%), Positives = 42/45 (93%)
Frame = -3

Query: 471 RRAGDSSEVYASTEKVERELHWRARYGIDEMCRDQWNWARENPWG 337
RR GD++EVYASTEK EREL WRA+YGI+EMCRDQWNWA++NP+G
Sbjct: 313 RRPGDATEVYASTEKAERELGWRAQYGIEEMCRDQWNWAKKNPYG 357


>tr|B7FIW1|B7FIW1_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=2 SV=1
Length = 392

Score = 85.5 bits (210), Expect = 1e-15
Identities = 36/52 (69%), Positives = 43/52 (82%)
Frame = -3

Query: 474 GRRAGDSSEVYASTEKVERELHWRARYGIDEMCRDQWNWARENPWGCRAPDS 319
GRR GD+ VYAST+K EREL W+A+YGID MCRDQWNWA +NP+G +PDS
Sbjct: 339 GRRPGDAEIVYASTKKAERELKWKAKYGIDGMCRDQWNWASKNPYGYGSPDS 390


>tr|B6TA76|B6TA76_MAIZE UDP-glucose 4-epimerase OS=Zea mays PE=2
SV=1
Length = 363

Score = 85.5 bits (210), Expect = 1e-15
Identities = 35/45 (77%), Positives = 42/45 (93%)
Frame = -3

Query: 471 RRAGDSSEVYASTEKVERELHWRARYGIDEMCRDQWNWARENPWG 337
RR GD++EVYASTEK EREL WRA+YGI+EMCRDQWNWA++NP+G
Sbjct: 312 RRPGDATEVYASTEKAERELAWRAQYGIEEMCRDQWNWAKKNPYG 356


>tr|B4FU63|B4FU63_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 363

Score = 85.5 bits (210), Expect = 1e-15
Identities = 35/45 (77%), Positives = 42/45 (93%)
Frame = -3

Query: 471 RRAGDSSEVYASTEKVERELHWRARYGIDEMCRDQWNWARENPWG 337
RR GD++EVYASTEK EREL WRA+YGI+EMCRDQWNWA++NP+G
Sbjct: 312 RRPGDATEVYASTEKAERELAWRAQYGIEEMCRDQWNWAKKNPYG 356


>tr|B4FG89|B4FG89_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 318

Score = 85.5 bits (210), Expect = 1e-15
Identities = 35/45 (77%), Positives = 42/45 (93%)
Frame = -3

Query: 471 RRAGDSSEVYASTEKVERELHWRARYGIDEMCRDQWNWARENPWG 337
RR GD++EVYASTEK EREL WRA+YGI+EMCRDQWNWA++NP+G
Sbjct: 267 RRPGDATEVYASTEKAERELAWRAQYGIEEMCRDQWNWAKKNPYG 311


>tr|B7FK31|B7FK31_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=2 SV=1
Length = 350

Score = 84.0 bits (206), Expect = 3e-15
Identities = 31/45 (68%), Positives = 41/45 (91%)
Frame = -3

Query: 471 RRAGDSSEVYASTEKVERELHWRARYGIDEMCRDQWNWARENPWG 337
RR GD++EVYAST+K ++EL W+A+YG++EMCRDQWNWA+ NPWG
Sbjct: 301 RRPGDATEVYASTDKAQKELGWKAKYGVEEMCRDQWNWAKNNPWG 345