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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916338
Clone id YMU001_000086_E10
Library
Length 538
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000086_E10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTGTAATAATGTTAACAGTTGTACAAAATAACTAACATATACAGTGAGAGCTCGTCCGTG
AACACAGAGACACAAAGAATGGTTGTGATACAAGGACTTCGCAGACACTAAATAATTGAA
TACATAGCAATGATTTCTTAAATTTCAATGAATATAACCAGGAGGTATAGCCATGGTGAA
ATCAGCATTTCATTGCAGAAAAGGCTCTTGGCACAAAGTAGCCGCTTGGACTTTAGCAAC
AAAAGAAGCTGGGGAGCCTTTAGAAAGGGCTGACAGACCGAGCTAACTGAAGTAGCAGCT
CCGGAACCAATCTTCGTCTTGGCTCCGAAGTAGCATCTTTCAATTGTGCCTCCTTATCAC
CTGCACGTACAACTGCAAGGATGTCTTCAAAGAGTGCATCCCTTCCACCTCGCATTGGAT
CCTGCAGAAATACATCCGTATGCGTCTTCCCTTCATAAATTCTTGTGGTCACCTGTGCAC
CACAAGACGCAAGAACACTTGCAAAAGATGTGCTGGCATCACACGGAATAGAATAATC
■■Homology search results ■■ -
sp_hit_id O94956
Definition sp|O94956|SO2B1_HUMAN Solute carrier organic anion transporter family member 2B1 OS=Homo sapiens
Align length 58
Score (bit) 32.7
E-value 1.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916338|Adiantum capillus-veneris mRNA, clone:
YMU001_000086_E10.
         (538 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O94956|SO2B1_HUMAN Solute carrier organic anion transporter f...    33   1.2  
sp|P18488|EMS_DROME Homeotic protein empty spiracles OS=Drosophi...    33   1.2  
sp|Q22498|COPG_CAEEL Probable coatomer subunit gamma OS=Caenorha...    33   1.2  
sp|Q9JIR4|RIMS1_RAT Regulating synaptic membrane exocytosis prot...    31   4.4  
sp|Q99NE5|RIMS1_MOUSE Regulating synaptic membrane exocytosis pr...    31   4.4  
sp|Q86UR5|RIMS1_HUMAN Regulating synaptic membrane exocytosis pr...    31   4.4  
sp|P25547|GBPR_AGRTU HTH-type transcriptional regulator gbpR OS=...    30   9.7  
sp|Q38907|XTH25_ARATH Probable xyloglucan endotransglucosylase/h...    30   9.8  

>sp|O94956|SO2B1_HUMAN Solute carrier organic anion transporter
           family member 2B1 OS=Homo sapiens GN=SLCO2B1 PE=2 SV=1
          Length = 709

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = -1

Query: 487 SCGAQVTTRIYEGKTHTDVF--LQDPMRGGRDALFEDILAVVRAGDKEAQLKDATSEP 320
           SCG +   R Y      + F  LQ   + G    F  +LAV+R  DKEA+ K++ S P
Sbjct: 632 SCGRRAVCRYYNNDLLRNRFIGLQFFFKTGSVICFALVLAVLRQQDKEARTKESRSSP 689


>sp|P18488|EMS_DROME Homeotic protein empty spiracles OS=Drosophila
           melanogaster GN=ems PE=2 SV=2
          Length = 497

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
 Frame = +1

Query: 283 LTEVAAPEPIFVLAPK*HLSIVPPYHLHVQLQGCLQRVHPFHLALDPAE---IHPYASSL 453
           LT +    P  ++AP  H    P  H   Q Q  LQ  HP H  L PA+   +H +    
Sbjct: 72  LTLIPGSPPHHLMAPPAHGLPYPHPHAQQQQQQHLQAPHP-HPHLSPAQQHVLHQHLLMQ 130

Query: 454 HKFLWSPVHHK-TQEHLQKMCWHH 522
           H+   +P  H+  QE LQ++  HH
Sbjct: 131 HQHPGTPKSHQDIQELLQRL--HH 152


>sp|Q22498|COPG_CAEEL Probable coatomer subunit gamma
           OS=Caenorhabditis elegans GN=T14G10.5 PE=2 SV=1
          Length = 870

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = -1

Query: 520 DASTSFASVLASCGAQVTTRIYEGKTHTDVFLQDPMRGGRDALFEDILAV 371
           DA    + +L     + + R+ EGKT   VFL    RGG D L +  +AV
Sbjct: 792 DAVKKISEILGLVPCERSDRVPEGKTQHTVFLSGVFRGGYDVLSKATVAV 841


>sp|Q9JIR4|RIMS1_RAT Regulating synaptic membrane exocytosis protein
           1 OS=Rattus norvegicus GN=Rims1 PE=1 SV=1
          Length = 1615

 Score = 30.8 bits (68), Expect = 4.4
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 452 FINSCGHLCTTRRKNTCKRCAG 517
           F + CGHLC+  R   C RC G
Sbjct: 147 FADGCGHLCSYCRTKFCARCGG 168


>sp|Q99NE5|RIMS1_MOUSE Regulating synaptic membrane exocytosis
           protein 1 OS=Mus musculus GN=Rims1 PE=1 SV=2
          Length = 1463

 Score = 30.8 bits (68), Expect = 4.4
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 452 FINSCGHLCTTRRKNTCKRCAG 517
           F + CGHLC+  R   C RC G
Sbjct: 147 FADGCGHLCSYCRTKFCARCGG 168


>sp|Q86UR5|RIMS1_HUMAN Regulating synaptic membrane exocytosis
           protein 1 OS=Homo sapiens GN=RIMS1 PE=1 SV=1
          Length = 1692

 Score = 30.8 bits (68), Expect = 4.4
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 452 FINSCGHLCTTRRKNTCKRCAG 517
           F + CGHLC+  R   C RC G
Sbjct: 124 FADGCGHLCSYCRTKFCARCGG 145


>sp|P25547|GBPR_AGRTU HTH-type transcriptional regulator gbpR
           OS=Agrobacterium tumefaciens GN=gbpR PE=4 SV=2
          Length = 302

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +3

Query: 366 RTTARMSSKSASLPPRIGSCRNTSVC 443
           R +   SS +ASLPP+ GSCR    C
Sbjct: 266 RISNSWSSLTASLPPKAGSCRPAPAC 291


>sp|Q38907|XTH25_ARATH Probable xyloglucan
           endotransglucosylase/hydrolase protein 25 OS=Arabidopsis
           thaliana GN=XTH25 PE=2 SV=2
          Length = 284

 Score = 29.6 bits (65), Expect = 9.8
 Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = +1

Query: 352 PYHLH--VQLQGCLQRVHPFHLALDP-AEIHPYASSLHKFLWSPVH 480
           PY +H  V  QG   R   FHL  DP A+ H Y+      LW+P H
Sbjct: 117 PYTMHTNVYTQGKGDREQQFHLWFDPTADFHTYS-----VLWNPHH 157
tr_hit_id A7P2Z7
Definition tr|A7P2Z7|A7P2Z7_VITVI Chromosome chr1 scaffold_5, whole genome shotgun sequence OS=Vitis vinifera
Align length 92
Score (bit) 96.3
E-value 9.0e-19
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916338|Adiantum capillus-veneris mRNA, clone:
YMU001_000086_E10.
         (538 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7P2Z7|A7P2Z7_VITVI Chromosome chr1 scaffold_5, whole genome ...    96   9e-19
tr|A5BXD7|A5BXD7_VITVI Putative uncharacterized protein OS=Vitis...    96   9e-19
tr|Q6L5F5|Q6L5F5_ORYSJ Os05g0577200 protein OS=Oryza sativa subs...    91   5e-17
tr|A3B745|A3B745_ORYSJ Putative uncharacterized protein OS=Oryza...    91   5e-17
tr|A2Y7U0|A2Y7U0_ORYSI Putative uncharacterized protein OS=Oryza...    91   5e-17
tr|Q9LFU2|Q9LFU2_ARATH Carboxylesterase-like protein OS=Arabidop...    90   7e-17
tr|Q94AS5|Q94AS5_ARATH Putative Carboxylesterase OS=Arabidopsis ...    90   7e-17
tr|B8ACD1|B8ACD1_ORYSI Putative uncharacterized protein OS=Oryza...    86   9e-16
tr|Q9C556|Q9C556_ARATH Putative uncharacterized protein F28B23.2...    85   2e-15
tr|Q8VYP9|Q8VYP9_ARATH Putative uncharacterized protein At1g2612...    85   2e-15
tr|Q1KUX4|Q1KUX4_9ROSI Putative uncharacterized protein OS=Cleom...    85   3e-15
tr|A9SFX0|A9SFX0_PHYPA Predicted protein OS=Physcomitrella paten...    85   3e-15
tr|B4FFC7|B4FFC7_MAIZE Putative uncharacterized protein OS=Zea m...    84   4e-15
tr|A7Q8B1|A7Q8B1_VITVI Chromosome chr14 scaffold_63, whole genom...    84   4e-15
tr|Q9M899|Q9M899_ARATH F16B3.4 protein OS=Arabidopsis thaliana G...    79   2e-13
tr|Q1PET6|Q1PET6_ARATH Putative uncharacterized protein OS=Arabi...    79   2e-13
tr|B3H6W3|B3H6W3_ARATH Uncharacterized protein At3g02410.2 OS=Ar...    79   2e-13
tr|A0MEU1|A0MEU1_ARATH Putative uncharacterized protein (Fragmen...    79   2e-13
tr|A2ZVX0|A2ZVX0_ORYSJ Putative uncharacterized protein OS=Oryza...    75   2e-12
tr|A9TAW2|A9TAW2_PHYPA Predicted protein OS=Physcomitrella paten...    73   8e-12
tr|B6UAH8|B6UAH8_MAIZE Carboxylesterase-like protein OS=Zea mays...    73   1e-11
tr|Q5Z9I2|Q5Z9I2_ORYSJ Os06g0708100 protein OS=Oryza sativa subs...    68   3e-10
tr|A2YGU8|A2YGU8_ORYSI Putative uncharacterized protein OS=Oryza...    68   3e-10
tr|A8JGR8|A8JGR8_CHLRE Carboxyesterase-related protein (Fragment...    55   2e-06
tr|A8JGR9|A8JGR9_CHLRE Carboxyesterase-related protein (Fragment...    53   1e-05
tr|Q010S2|Q010S2_OSTTA Carboxylesterase and related proteins (IS...    48   3e-04
tr|A4S388|A4S388_OSTLU Predicted protein OS=Ostreococcus lucimar...    45   0.002
tr|B8CFN8|B8CFN8_THAPS Predicted protein (Fragment) OS=Thalassio...    36   1.1  
tr|B4N7C8|B4N7C8_DROWI GK21048 OS=Drosophila willistoni GN=GK210...    34   5.6  
tr|A9V4Z5|A9V4Z5_MONBE Predicted protein OS=Monosiga brevicollis...    34   5.6  

>tr|A7P2Z7|A7P2Z7_VITVI Chromosome chr1 scaffold_5, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00030247001
           PE=3 SV=1
          Length = 458

 Score = 96.3 bits (238), Expect = 9e-19
 Identities = 48/92 (52%), Positives = 59/92 (64%)
 Frame = -1

Query: 538 DYSIPCDASTSFASVLASCGAQVTTRIYEGKTHTDVFLQDPMRGGRDALFEDILAVVRAG 359
           DYSIP DAS SFA  L   G +  + +YEG+THTDVFL DPMRGGRD +FED++A++ A 
Sbjct: 367 DYSIPADASKSFAETLQRVGVKAESIMYEGRTHTDVFLHDPMRGGRDDMFEDLVAMIHAN 426

Query: 358 DKEAQLKDATSEPXXXXXXXXXXXXXRSVSPF 263
           D EA  KDA + P             R+VSPF
Sbjct: 427 DPEALAKDAVAPPRKRLVPEFMLKLARAVSPF 458


>tr|A5BXD7|A5BXD7_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_017373 PE=3 SV=1
          Length = 395

 Score = 96.3 bits (238), Expect = 9e-19
 Identities = 48/92 (52%), Positives = 59/92 (64%)
 Frame = -1

Query: 538 DYSIPCDASTSFASVLASCGAQVTTRIYEGKTHTDVFLQDPMRGGRDALFEDILAVVRAG 359
           DYSIP DAS SFA  L   G +  + +YEG+THTDVFL DPMRGGRD +FED++A++ A 
Sbjct: 304 DYSIPADASKSFAETLQRVGVKAESIMYEGRTHTDVFLHDPMRGGRDDMFEDLVAMIHAN 363

Query: 358 DKEAQLKDATSEPXXXXXXXXXXXXXRSVSPF 263
           D EA  KDA + P             R+VSPF
Sbjct: 364 DPEALAKDAVAPPRKRLVPEFMLKLARAVSPF 395


>tr|Q6L5F5|Q6L5F5_ORYSJ Os05g0577200 protein OS=Oryza sativa subsp.
           japonica GN=OJ1126_B10.7 PE=3 SV=1
          Length = 414

 Score = 90.5 bits (223), Expect = 5e-17
 Identities = 45/92 (48%), Positives = 57/92 (61%)
 Frame = -1

Query: 538 DYSIPCDASTSFASVLASCGAQVTTRIYEGKTHTDVFLQDPMRGGRDALFEDILAVVRAG 359
           DYSIP  AS +FA VL   GA+    +YEGKTHTDVFLQDP+RGGRD L ED+++V+ A 
Sbjct: 323 DYSIPFSASETFAGVLKQAGAKAKLLLYEGKTHTDVFLQDPLRGGRDKLVEDVISVIHAD 382

Query: 358 DKEAQLKDATSEPXXXXXXXXXXXXXRSVSPF 263
           D +A+ KDA +                 +SPF
Sbjct: 383 DADAREKDALAPIPGRLVSEWQIKLAHRISPF 414


>tr|A3B745|A3B745_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_018867 PE=3 SV=1
          Length = 371

 Score = 90.5 bits (223), Expect = 5e-17
 Identities = 45/92 (48%), Positives = 57/92 (61%)
 Frame = -1

Query: 538 DYSIPCDASTSFASVLASCGAQVTTRIYEGKTHTDVFLQDPMRGGRDALFEDILAVVRAG 359
           DYSIP  AS +FA VL   GA+    +YEGKTHTDVFLQDP+RGGRD L ED+++V+ A 
Sbjct: 280 DYSIPFSASETFAGVLKQAGAKAKLLLYEGKTHTDVFLQDPLRGGRDKLVEDVISVIHAD 339

Query: 358 DKEAQLKDATSEPXXXXXXXXXXXXXRSVSPF 263
           D +A+ KDA +                 +SPF
Sbjct: 340 DADAREKDALAPIPGRLVSEWQIKLAHRISPF 371


>tr|A2Y7U0|A2Y7U0_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_21109 PE=3 SV=1
          Length = 458

 Score = 90.5 bits (223), Expect = 5e-17
 Identities = 45/92 (48%), Positives = 57/92 (61%)
 Frame = -1

Query: 538 DYSIPCDASTSFASVLASCGAQVTTRIYEGKTHTDVFLQDPMRGGRDALFEDILAVVRAG 359
           DYSIP  AS +FA VL   GA+    +YEGKTHTDVFLQDP+RGGRD L ED+++V+ A 
Sbjct: 367 DYSIPFSASETFAGVLKQAGAKAKLLLYEGKTHTDVFLQDPLRGGRDKLVEDVISVIHAD 426

Query: 358 DKEAQLKDATSEPXXXXXXXXXXXXXRSVSPF 263
           D +A+ KDA +                 +SPF
Sbjct: 427 DADAREKDALAPIPGRLVSEWQIKLAHRISPF 458


>tr|Q9LFU2|Q9LFU2_ARATH Carboxylesterase-like protein OS=Arabidopsis
           thaliana GN=F14F8_240 PE=3 SV=1
          Length = 419

 Score = 90.1 bits (222), Expect = 7e-17
 Identities = 42/92 (45%), Positives = 57/92 (61%)
 Frame = -1

Query: 538 DYSIPCDASTSFASVLASCGAQVTTRIYEGKTHTDVFLQDPMRGGRDALFEDILAVVRAG 359
           DYSIPCD S +F   L + GA+    +Y GKTHTD+FLQDP+RGG+D LF+DI++V+ A 
Sbjct: 328 DYSIPCDESKTFTDALQAVGAKAELVLYSGKTHTDLFLQDPLRGGKDELFDDIVSVIHAE 387

Query: 358 DKEAQLKDATSEPXXXXXXXXXXXXXRSVSPF 263
           D +   KD+ + P             R +SPF
Sbjct: 388 DNDGLTKDSLAPPRKRLVPELLLKLAREISPF 419


>tr|Q94AS5|Q94AS5_ARATH Putative Carboxylesterase OS=Arabidopsis
           thaliana GN=At5g15860 PE=2 SV=1
          Length = 427

 Score = 90.1 bits (222), Expect = 7e-17
 Identities = 42/92 (45%), Positives = 57/92 (61%)
 Frame = -1

Query: 538 DYSIPCDASTSFASVLASCGAQVTTRIYEGKTHTDVFLQDPMRGGRDALFEDILAVVRAG 359
           DYSIPCD S +F   L + GA+    +Y GKTHTD+FLQDP+RGG+D LF+DI++V+ A 
Sbjct: 336 DYSIPCDESKTFTDALQAVGAKAELVLYSGKTHTDLFLQDPLRGGKDELFDDIVSVIHAE 395

Query: 358 DKEAQLKDATSEPXXXXXXXXXXXXXRSVSPF 263
           D +   KD+ + P             R +SPF
Sbjct: 396 DNDGLTKDSLAPPRKRLVPELLLKLAREISPF 427


>tr|B8ACD1|B8ACD1_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_03031 PE=4 SV=1
          Length = 342

 Score = 86.3 bits (212), Expect = 9e-16
 Identities = 39/69 (56%), Positives = 50/69 (72%)
 Frame = -1

Query: 538 DYSIPCDASTSFASVLASCGAQVTTRIYEGKTHTDVFLQDPMRGGRDALFEDILAVVRAG 359
           DYSIP  AS +FA VL   GAQ   ++YEGKTHTD+F+QDP+RGGRD L ED+L+++   
Sbjct: 251 DYSIPSSASQTFADVLQQAGAQAKLQLYEGKTHTDIFIQDPLRGGRDPLVEDVLSIIHVD 310

Query: 358 DKEAQLKDA 332
           D+  Q K A
Sbjct: 311 DEITQEKIA 319


>tr|Q9C556|Q9C556_ARATH Putative uncharacterized protein F28B23.20
           (Putative uncharacterized protein F14G11.9)
           OS=Arabidopsis thaliana GN=F28B23.20 PE=3 SV=1
          Length = 472

 Score = 85.1 bits (209), Expect = 2e-15
 Identities = 41/64 (64%), Positives = 47/64 (73%)
 Frame = -1

Query: 538 DYSIPCDASTSFASVLASCGAQVTTRIYEGKTHTDVFLQDPMRGGRDALFEDILAVVRAG 359
           DYSIP DAS SFA  L   GA+    +YEGKTHTD+FLQDPMRGG D +FEDI+ VV   
Sbjct: 384 DYSIPSDASKSFAETLQRLGAKAKVILYEGKTHTDLFLQDPMRGGIDEMFEDIVTVVLGD 443

Query: 358 DKEA 347
           D+EA
Sbjct: 444 DQEA 447


>tr|Q8VYP9|Q8VYP9_ARATH Putative uncharacterized protein At1g26120
           OS=Arabidopsis thaliana GN=At1g26120 PE=2 SV=1
          Length = 476

 Score = 85.1 bits (209), Expect = 2e-15
 Identities = 41/64 (64%), Positives = 47/64 (73%)
 Frame = -1

Query: 538 DYSIPCDASTSFASVLASCGAQVTTRIYEGKTHTDVFLQDPMRGGRDALFEDILAVVRAG 359
           DYSIP DAS SFA  L   GA+    +YEGKTHTD+FLQDPMRGG D +FEDI+ VV   
Sbjct: 388 DYSIPSDASKSFAETLQRLGAKAKVILYEGKTHTDLFLQDPMRGGIDEMFEDIVTVVLGD 447

Query: 358 DKEA 347
           D+EA
Sbjct: 448 DQEA 451